Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A10 F169 I1 R1
|
59 |
169.8 |
8365175 |
96.8% |
8097489 |
99.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,128,352 |
T→A |
H15L (CAC→CTC) |
metJ ← |
transcriptional repressor, S‑adenosylmethionine‑binding |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,128,352 | 0 | T | A | 99.4%
| 584.2
/ ‑6.0
| 174 | H15L (CAC→CTC) | metJ | transcriptional repressor, S‑adenosylmethionine‑binding |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (86/87); minor base C (1/0); total (87/87) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.85e-01 |
Only 100 of 174 total aligned reads displayed.
GTTCACCTGACGACGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGTGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATAAATTGAGACCAGACCACACAGTTGAT > NC_000913/4128255‑4128447
|
tCACCTGACGACGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTc > 1:3943655/1‑100 (MQ=255)
cACCTGACGACGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCa > 2:731021/1‑100 (MQ=255)
cACCTGACGACGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCa > 2:668381/1‑100 (MQ=255)
cACCTGACGACGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCa > 2:1548384/1‑100 (MQ=255)
cACCTGACGACGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCa > 1:3404878/1‑100 (MQ=255)
cACCTGACGACGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCa > 1:3180352/1‑100 (MQ=255)
aCCTGACGACGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAg > 1:113254/1‑100 (MQ=255)
ccTGACGACGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGc > 2:3581011/1‑100 (MQ=255)
ccTGACGACGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGc < 2:2790069/100‑1 (MQ=255)
acgacgCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTAt < 2:88747/100‑1 (MQ=255)
acgacgCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTAt < 1:3543778/100‑1 (MQ=255)
cgcgTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGc > 1:828577/1‑100 (MQ=255)
tccgatcttCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCt < 2:2807051/93‑1 (MQ=255)
gcgtgcgtTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCt < 1:1650650/100‑1 (MQ=255)
gtgcgtTCATCGGTGAGGATTTTTTACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGa < 1:3076960/100‑1 (MQ=255)
gtgcgtTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGa > 1:4165655/1‑100 (MQ=255)
gtgcgtTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGa > 1:2121506/1‑100 (MQ=255)
gtgcgtTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGa < 2:2949087/100‑1 (MQ=255)
tgcgtTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGat < 2:4127090/100‑1 (MQ=255)
gcgtTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGata < 2:4108264/100‑1 (MQ=255)
cgtTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATgagatcggaa > 2:1936688/1‑91 (MQ=255)
tCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCtagatcgga > 1:2807083/1‑92 (MQ=255)
cATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTc > 2:1315803/1‑100 (MQ=255)
aTCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTcg > 1:3069826/1‑100 (MQ=255)
cGGTGAGGATTTTTAACACCTTATGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTcgc < 2:1563044/99‑1 (MQ=255)
cGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTcgcc < 1:1986908/100‑1 (MQ=255)
ggTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTcgccg > 1:2967690/1‑100 (MQ=255)
gTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTcgccgc < 2:1957068/100‑1 (MQ=255)
gTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTcgc > 2:3451174/1‑97 (MQ=255)
tGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCt < 1:267127/100‑1 (MQ=255)
aGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTcc < 2:3895971/100‑1 (MQ=255)
ggATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCa > 1:1228226/1‑100 (MQ=255)
ggATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCa < 1:763703/100‑1 (MQ=255)
ggATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCa > 1:593787/1‑100 (MQ=255)
aTTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTTTTTTTTTTTTTATTCTAACCGAGCTCAGCGTATTGGTTAATATATTCGCCTCTCCAtt > 2:816907/1‑100 (MQ=255)
aTTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGTCTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCAtt > 2:3726120/1‑100 (MQ=255)
aTTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCAtt < 2:3114485/100‑1 (MQ=255)
tttAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAg < 1:2101651/100‑1 (MQ=255)
tttAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAg < 1:334563/100‑1 (MQ=255)
ttAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGc > 1:234635/1‑100 (MQ=255)
tAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCGTTCAGcc < 1:2199686/100‑1 (MQ=255)
tAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGcc > 1:3582718/1‑100 (MQ=255)
tAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGcc > 1:1834020/1‑100 (MQ=255)
gatctccTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGcn < 2:228112/95‑2 (MQ=255)
aaCACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGcc > 2:2096043/1‑99 (MQ=255)
acacCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGCGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCAt > 2:2668668/1‑100 (MQ=255)
acacCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCAt < 1:4126779/100‑1 (MQ=255)
cacCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATg > 2:2356615/1‑100 (MQ=255)
cacCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATg > 2:3783868/1‑100 (MQ=255)
acCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATga < 1:1386018/100‑1 (MQ=255)
ccTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCagatc > 1:228117/1‑96 (MQ=255)
cTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATgaga < 1:2459431/100‑1 (MQ=255)
cTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATgaga < 2:3690686/100‑1 (MQ=255)
cTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATgaga > 1:2084822/1‑100 (MQ=255)
ttAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGAt > 1:41452/1‑100 (MQ=255)
tAAGAGGAATGGAAACCGTAATCTTTTTTTTTTTTTTACTCTTCTTGCCGAGCTCAACGTATGGGCTGATATATTTGCCGCTCCATTCAGCCATGAGAt > 2:1851359/1‑99 (MQ=255)
agagGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACt < 1:2515319/100‑1 (MQ=255)
agagGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACt > 2:1747789/1‑100 (MQ=255)
agagGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACt < 2:3296548/100‑1 (MQ=255)
agagGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACt < 2:1039935/100‑1 (MQ=255)
gagGAATGTAAACCGTAATCTTTTTGACGTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACtt < 2:2510939/100‑1 (MQ=255)
agGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTa > 1:2228672/1‑100 (MQ=255)
ggAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTaa > 1:1838631/1‑100 (MQ=255)
ggAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTaa > 2:2730351/1‑100 (MQ=255)
ggAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTaa > 2:2442425/1‑100 (MQ=255)
ggAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTaa > 2:1028277/1‑100 (MQ=255)
ggAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTAGGGGCGGATATATTCGCCGCTCCATTCAGCCATGAGATACTTaa > 2:345140/1‑100 (MQ=255)
gAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAAt > 1:699310/1‑100 (MQ=255)
aTGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATcc < 2:3213173/100‑1 (MQ=255)
aTGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATcc < 1:222710/100‑1 (MQ=255)
aTGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATcc > 2:2599677/1‑100 (MQ=255)
gAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCctct > 2:2266576/1‑100 (MQ=255)
gAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCctct < 2:306625/100‑1 (MQ=255)
aaCCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTc < 2:1228216/100‑1 (MQ=255)
aCCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCg < 2:2580586/100‑1 (MQ=255)
cGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTc < 2:1740292/100‑1 (MQ=255)
cGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTc < 1:1417001/100‑1 (MQ=255)
tAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCaa > 1:1118436/1‑100 (MQ=255)
tAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCaa < 2:1273549/100‑1 (MQ=255)
aaTCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAAt < 2:113254/100‑1 (MQ=255)
tttttGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATAAAt < 1:4042004/100‑1 (MQ=255)
ttttGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATAAAtt < 1:2709867/100‑1 (MQ=255)
ttttGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATAAAtt > 1:438592/1‑100 (MQ=255)
ttttGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATAAAtt < 1:634889/100‑1 (MQ=255)
tGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATAAATTgag < 1:3726161/100‑1 (MQ=255)
tGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATAAATTgag < 2:2967658/100‑1 (MQ=255)
aCTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATAAATTGagac < 1:2075324/100‑1 (MQ=255)
aCTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATAAATTGagac < 2:4165610/100‑1 (MQ=255)
aCTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATAAATTGagac < 2:234630/100‑1 (MQ=255)
aCTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATAAATTGagac > 1:1498444/1‑100 (MQ=255)
cTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATAAATTGagacc < 2:438588/100‑1 (MQ=255)
ttCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATAAATTGagaccagac > 1:3951354/1‑100 (MQ=255)
ttCACTCTTCCTGCCGAGCTCAGCGTATGGGCTGATATATTCGCTGCTTCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATAAATTGagaccaga < 2:3929255/99‑1 (MQ=255)
tcttctTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTTAATAAATTGAGACCAGACcacac < 2:3404840/100‑1 (MQ=255)
tcttctTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATAAATTGAGACCAGACcacac < 2:1407547/100‑1 (MQ=255)
tctgctTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATAAATTGagaccagacc < 1:96347/96‑1 (MQ=255)
ttcttGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATAAATTGAGACCAGACCACACAg > 2:3371744/1‑100 (MQ=255)
tcttGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATAAATTGAGACCAGACCACACAGt < 2:1083241/100‑1 (MQ=255)
tGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATAAATTGAGACCAGACCACACAGTTGa < 2:2917250/100‑1 (MQ=255)
gCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATAAATTGAGACCAGACCACACAGTTGAt < 1:2442450/100‑1 (MQ=255)
|
GTTCACCTGACGACGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGTGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATAAATTGAGACCAGACCACACAGTTGAT > NC_000913/4128255‑4128447
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
