Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A10 F169 I0 R1
|
76 |
156.9 |
7610945 |
95.9% |
7298896 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,128,352 |
T→A |
100% |
H15L (CAC→CTC) |
metJ ← |
transcriptional repressor, S‑adenosylmethionine‑binding |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,128,352 | 0 | T | A | 97.8%
| 432.9
/ 0.4
| 134 | H15L (CAC→CTC) | metJ | transcriptional repressor, S‑adenosylmethionine‑binding |
| Reads supporting (aligned to +/- strand): ref base T (2/1); new base A (60/70); total (62/72) |
| Fisher's exact test for biased strand distribution p-value = 5.98e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.06e-01 |
Only 100 of 134 total aligned reads displayed.
TTCACCTGACGACGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGTGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATAAATTGAGACCAGACCACACAGTTGATG > NC_000913/4128256‑4128448
|
ccTGACGACGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGc > 2:334287/1‑100 (MQ=255)
cTGACGACGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCg < 2:2369441/100‑1 (MQ=255)
cTGACGACGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCg < 2:503718/100‑1 (MQ=255)
cTGACGACGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTAACTCTTCTTGCCGTGCTCAGCg > 2:1767901/1‑100 (MQ=255)
tGACGACGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGt < 1:813738/100‑1 (MQ=255)
gacgacGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTa > 1:701057/1‑100 (MQ=255)
gacgCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATgg < 2:1339920/100‑1 (MQ=255)
acgCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGTGCTCAGCGTATggg < 2:661638/100‑1 (MQ=255)
acgCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATggg < 1:3754764/100‑1 (MQ=255)
acgCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATggg > 2:445846/1‑100 (MQ=255)
cgcgTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATggg < 2:523566/99‑1 (MQ=255)
cgcgTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATggg < 1:42585/99‑1 (MQ=255)
gcgtgcgtTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCt < 2:3585217/100‑1 (MQ=255)
cgtgcgtTCATCGGTGAGGATTTTTAACACATTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTg > 1:1115160/1‑100 (MQ=255)
gtgcgtTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGa < 2:3296937/100‑1 (MQ=255)
gtgcgtTCATCAGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGa < 1:1353278/100‑1 (MQ=255)
tgcgtTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGat < 1:701164/100‑1 (MQ=255)
cgtTCATCTGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCTAGCTCAGCGTATGGGCTGata < 1:1235968/99‑1 (MQ=255)
cgtTCATCGGTGAGGATTTTTAACACCTTAAGAGGAAGGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGatat > 1:2033566/1‑100 (MQ=255)
gtTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGTTCAGCGTATGGGCTGatata > 1:994163/1‑100 (MQ=255)
gtTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGatata > 1:994223/1‑100 (MQ=255)
ttCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGatatat < 2:1273807/100‑1 (MQ=255)
aTCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTcg < 2:511885/100‑1 (MQ=255)
aTCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTcg < 2:2292677/100‑1 (MQ=255)
tCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACGGTAATCTTTTTGACTTGTTCACCCTTCTTGCCGAGCTCAGCGTTTGCGCTGATATATTctc > 1:1448160/1‑98 (MQ=255)
cGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTcgcc < 2:1799425/100‑1 (MQ=255)
ggTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTTACTTGTTCACTCTTTTTGCCGAGCTCAGCGTATGTGCTGATATATTcgctg > 1:620312/1‑98 (MQ=255)
ggTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTcgccg > 2:152572/1‑100 (MQ=255)
ggTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTcgccg > 1:2887668/1‑100 (MQ=255)
tGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCt < 2:3315618/100‑1 (MQ=255)
aGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTcc < 2:1756995/100‑1 (MQ=255)
aGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTcc < 2:23184/100‑1 (MQ=255)
aGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTcc < 2:3013641/100‑1 (MQ=255)
aGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTcc < 1:3733069/100‑1 (MQ=255)
aGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTcc > 1:1725615/1‑100 (MQ=255)
aGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTGCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTcc < 2:22563/100‑1 (MQ=255)
ggATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTCTGGGCTGATATATTCGCCGCTCCa > 2:2600224/1‑100 (MQ=255)
ggATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGTCTGATATATTCGCCGCTCCa > 2:1087618/1‑100 (MQ=255)
ggATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCa > 2:3675513/1‑100 (MQ=255)
ggATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTATTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCa > 2:1263365/1‑100 (MQ=255)
gATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCAt > 1:3147683/1‑100 (MQ=255)
ttAACACCTTAAGAGGAATGGAAACCGTAATATTTTTGACTTGTTCACTCTTCTTGCCGAGCGCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGc < 1:407354/100‑1 (MQ=255)
tAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGcc < 2:832662/100‑1 (MQ=255)
tAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGcc < 2:701061/100‑1 (MQ=255)
cacCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGTGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATg > 1:1024559/1‑100 (MQ=255)
cacCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATg < 1:2715521/100‑1 (MQ=255)
cacCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATg > 2:1474567/1‑100 (MQ=255)
acCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATga < 2:272457/100‑1 (MQ=255)
acCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATga < 1:2756924/100‑1 (MQ=255)
cTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATgaga > 2:1485722/1‑100 (MQ=255)
cTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATg < 1:3402795/97‑1 (MQ=255)
ggAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTaa > 1:560137/1‑100 (MQ=255)
ggAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTaa < 1:2763565/100‑1 (MQ=255)
aTGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATcc < 1:2600209/100‑1 (MQ=255)
aTGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATcc > 2:3693880/1‑100 (MQ=255)
tGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCct > 1:2415991/1‑100 (MQ=255)
tGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCct > 1:2416431/1‑100 (MQ=255)
aCCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCg < 2:3776413/100‑1 (MQ=255)
ccGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGt > 2:2268260/1‑100 (MQ=255)
cGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTc < 2:3071856/100‑1 (MQ=255)
cGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTc < 2:3069328/100‑1 (MQ=255)
cGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTc < 2:18500/100‑1 (MQ=255)
gTAATCTTTTTGACTTGTTAACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTc < 1:632527/99‑1 (MQ=255)
tAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCaa < 1:2903653/100‑1 (MQ=255)
tAATCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCaa > 2:2739299/1‑100 (MQ=255)
tAATCTTTTTGACTTCTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCaa < 1:930435/100‑1 (MQ=255)
ggggtttgtGACGTGTTCACTCTTCTTGCCGCGCTCAGCGTATGGGCTGGTATATGCGCCGCTCCATTCAGCCATGAGATACGTAATCCTCTTCGTCAAt < 1:2978613/96‑1 (MQ=255)
aaTCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAAt < 2:1381592/100‑1 (MQ=255)
aTCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATa > 2:470643/1‑100 (MQ=255)
tCTTTTTGACTTGTTCACTCTTCTTGCCGAGTTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATaa < 2:994168/100‑1 (MQ=255)
tCTTTTTGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATaa < 2:994228/100‑1 (MQ=255)
tttGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATAAATTg < 1:3516268/100‑1 (MQ=255)
tttGACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATAAATTg < 2:3784392/100‑1 (MQ=255)
gACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATAAATTgaga < 1:1424985/100‑1 (MQ=255)
gACTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATAAATTgaga > 1:1526052/1‑100 (MQ=255)
aCTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATAAATTGagac < 2:641629/100‑1 (MQ=255)
cTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCGTGAGATACTTAATCCTCTTCGTCAATAAATTGagacc > 1:1949707/1‑100 (MQ=255)
cTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATAAATTGagacc > 2:778728/1‑100 (MQ=255)
cTTGTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATAAATTGagacc > 2:3784161/1‑100 (MQ=255)
gTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATAAATTGagaccaga < 1:3692682/100‑1 (MQ=255)
gTTCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATAAATTGagaccaga < 1:1724444/100‑1 (MQ=255)
ttCACTCTTCTTGCCGAGCTCAGCGTATGGGCTTATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATACTCTTCGTCAATAAATTGagacc > 1:2534314/1‑96 (MQ=255)
ttCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATAAATTGagaccagac > 2:1044020/1‑100 (MQ=255)
tCACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATAAATTGagaccagacc < 2:1573878/100‑1 (MQ=255)
cACTCTTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATAAATTGAgaccagacca > 1:2096243/1‑100 (MQ=255)
ctctTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATAAATTGAGACCAGACcaca < 2:2247845/100‑1 (MQ=255)
ctctTCTTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATAAATTGAGACCAGACcaca > 1:1193857/1‑100 (MQ=255)
tcttctTGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATAAATTGAGACCAGACcacac < 1:1301833/100‑1 (MQ=255)
cttcttGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATAAATTGAGACCAGACcacaca < 1:3068094/100‑1 (MQ=255)
cttcttGCCGAGCTCAGCGTATGGGCTGATATAATCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCGTCGTCAATAAATTGAGACCAGACcacaca > 1:2273292/1‑100 (MQ=255)
ttcttGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATAAATTGAGACCAGACcacaca < 1:2209117/99‑1 (MQ=255)
ttcttGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATAAATTGAGACCAGACCACACAg > 2:409739/1‑100 (MQ=255)
tcttGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATAAATTGAGACCAGACCACACAGt > 2:1984150/1‑100 (MQ=255)
tcttGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATAAATTGAGACCAGACCACACAGt > 2:1554824/1‑100 (MQ=255)
cttGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATAAATTGAGACCAGACCACACAGtt < 2:2233482/100‑1 (MQ=255)
ttGCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATAAATTGAGACCAGACCACACAGTTg > 2:98273/1‑100 (MQ=255)
tccGAGCTCAGCGTATGGGCTGATATATTCGCCGCTACATTCAGCCATGAGATACTTAATCCTCTTCGCCAACAAATTAAGCCCACACCACACAGCTGAt > 1:3174934/2‑100 (MQ=255)
gCCGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATAAATTGAGACCAGACCACACAGTTGAt < 1:3378702/100‑1 (MQ=255)
gCCGAGCTCAGCGTATGGGCTGATAAATGCGCCCCTCCATTCCGCCATGCGATACTTAATCCCCTTCGTCCATAAATTGAGACCAGACCACACAGtt > 1:2593038/1‑97 (MQ=255)
ccGAGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATAAATTGAGACCAGACCACACAGTTGAtg < 1:3592214/100‑1 (MQ=255)
|
TTCACCTGACGACGCGTGCGTTCATCGGTGAGGATTTTTAACACCTTAAGAGGAATGGAAACCGTAATCTTTTTGACTTGTTCACTCTTCTTGCCGTGCTCAGCGTATGGGCTGATATATTCGCCGCTCCATTCAGCCATGAGATACTTAATCCTCTTCGTCAATAAATTGAGACCAGACCACACAGTTGATG > NC_000913/4128256‑4128448
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
