Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F212 I0 R1
|
246 |
122.0 |
6097616 |
93.1% |
5676880 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
2,534,206 |
T→G |
100% |
R47R (CGT→CGG) |
ptsI → |
PEP‑protein phosphotransferase of PTS system (enzyme I) |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,534,206 | 0 | T | G | 98.4%
| 317.9
/ ‑4.3
| 97 | R47R (CGT→CGG) | ptsI | PEP‑protein phosphotransferase of PTS system (enzyme I) |
| Reads supporting (aligned to +/- strand): ref base T (0/2); new base G (60/34); total (61/36) |
| Fisher's exact test for biased strand distribution p-value = 1.38e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.65e-01 |
AAGCTCTGCTTCTGAAAGAAGACGAAATTGTCATTGACCGGAAAAAAATTTCTGCCGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGTGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTGGTGAAACGTTCGGTGAAGAAAAAGAAGCCATCTTTGAAGGGCATATTATGCT > NC_000913/2534109‑2534301
|
aaGCTCTGCTTCTGAAAGAAGACGAAATTGTCATTGACCTGAAAAAAATTTCTGCCGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGc < 1:785835/100‑1 (MQ=255)
gCTCTGCTTCTGAAAGAAGACGAAATTGTCATTGACCGGAAAAAAATTTCTGCCGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGcc > 2:803433/1‑99 (MQ=255)
gCTCTGCTTCTGAAAGAAGACGAAATTGTCATTGACCGGAAAAAAATTTCTGCCGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCa < 1:1453564/100‑1 (MQ=255)
gCTCTGCTTCTGAAAGAAGACGAAATTGTCATTGACCGGAAAAAAATTTCTGCCGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCa > 2:1448264/1‑100 (MQ=255)
ctctGCTTCTGAAAGAAGACGAAATTGTCATTGACCGGAAAAAAATTTCTGCCGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCaa > 2:1898957/1‑100 (MQ=255)
ctGCTTCTGAAAGAAGACGAAATTGTCATTGACCGGAAAAAAATTTCTGCCGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAgg > 2:936657/1‑100 (MQ=255)
tGCTTCTGAAAGAAGACGAAATTGTCATTGACCGGAAAAAAATTTCTGCCGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAgg < 2:645017/99‑1 (MQ=255)
cTTCTGAAAGAAGACGAAATTGTCATTGACCGGAAAAAAATTTCTGCCGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCAt > 1:1947317/1‑100 (MQ=255)
cTTCTGAAAGAAGACGAAATTGTCATTGACCGGAAAAAAATTTCTGCCGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCAt > 2:1530147/1‑100 (MQ=255)
tCTGAAAGAAGACGAAATTGTCATTGACCGGAAAAAAATTTCTGCCGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCa < 1:256105/100‑1 (MQ=255)
tCTGAAAGAAGACGAAATTGTCATTGACCGGAAAAAAATTTCTGCCGAACAGGTTGATCAGGAAGTTGAACGATTTCTGAGCGGTCGGGCCAAGGCATCa > 1:2739769/1‑100 (MQ=255)
cTGAAAGAAGACGAAATTGTCATTGACCGGAAAAAAATTTCTGCCGACCAGGTTGATCAGGACGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAg > 2:446898/1‑100 (MQ=255)
cTGAAAGAAGACGAAATTGTCATTGACCGGAAAAAAATTTCTGCCGACCAGGTTGATCAGGAAGTTGAACGTTTTATGAGCGGTCGGGCCAAGGCATCAg > 1:2581467/1‑100 (MQ=255)
ttaaaGAAGACTAAATTGTCATTTACCGGAAAAAAATTTCTGCCGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATc < 2:1908400/95‑1 (MQ=255)
tGAAAGAAGACGAAATTGTCATTGACCGGAAAAAAATTTCTGCCGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGc > 1:883480/1‑100 (MQ=255)
aatgaagaCGACATCGCTATTGACAGCAAATAAAGTCTTGCCGACCAGGTTGATCATACAGTTGATCTTTTCCTTAGCGGGTGTGTCAAGGAATCAGc < 2:2595046/95‑1 (MQ=255)
aataagaCGAAATTGTTATTGATCGGAAAAAAATTTCTGCCGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCa < 1:394073/97‑1 (MQ=255)
aagaagACGAAATTGTCATTGACCGGAAAAAAATTTCTGCCGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCa < 2:1698989/100‑1 (MQ=255)
agaCGGAATTGTCATTGACCGGAAAAGAATTTGTGCCGACCAGGTTGATCAGGGAGGTGAACGTTTTCTGAGCGGTCGTGGCAAGGCATCAGCCCAGCTg < 1:1773909/100‑1 (MQ=255)
agaCGAAATTGTCATTGACCGGAAAAAAATTTCTGCCGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTg > 1:2421574/1‑100 (MQ=255)
cGAAATTGTCATTGACCGGAAAAAAATTTCTGCCGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGaa > 1:2618819/1‑100 (MQ=255)
gAAATTGTCATTGACCGG‑AAAAAATTTCTGCCGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAAc > 2:367408/1‑100 (MQ=255)
aaaTTGTCATTGACCGGAAAAAAATTTCTGCCGTCCAGGTTGATTAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAAc < 1:837544/100‑1 (MQ=255)
aaaTTGTCATTGACCGGAAAAAAATTTCTGCCGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAAc < 1:878146/100‑1 (MQ=255)
aaTTGTCATTGACCGGAAAAAAATTTCTGCCGACCAGGTTGATCATGAAGTTGAACGTTTTCTTAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAAc < 2:917039/99‑1 (MQ=255)
aaTTGTCATTGACCGAAAAAAAATTTCTGACGACCAGGTTGATAAGGAAGTTGAACGATTTCTGAGCGATCGGGCCAAGGCATCAGCCCAGCTGGaaa > 2:308678/1‑98 (MQ=255)
tGTCATTGACCGGAAAAAAATTTCTGCCGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATc < 1:2126799/100‑1 (MQ=255)
tGTCATTGACCGGAAAAAAATTTCTGCCGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATc < 2:858521/100‑1 (MQ=255)
gatcttGACCGGAAAAAAATTTCTGCCGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCa < 2:666213/96‑1 (MQ=255)
gTCATTGACCTGAAAAAAATTTCTCCCGACCAAGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCa < 2:1340356/100‑1 (MQ=255)
gTCATTGACCGGAAAAAAATTTCTGCCGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAACGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCa > 1:1137945/1‑100 (MQ=255)
cATTGACCGGAAAAAAATTTCTGCCGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCCGCTGGAAACGATCaaa > 2:529935/1‑100 (MQ=255)
aTTGACCGGAAAAAAATTTCTGCCGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCaaaa < 1:956501/100‑1 (MQ=255)
tGACCGGAAAAAAATTTCTGCCGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCAAAGGCATCAGCCCAGCTGGAAACGATCaagatc > 1:666217/1‑96 (MQ=255)
gACCGGAAAAAAATTTCTGCCGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGa > 1:1116405/1‑100 (MQ=255)
gACCGGAAAAAAATTTCTGCCGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGa > 1:1760783/1‑100 (MQ=255)
aCCGGAAAAAAATTTCTGCCGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGaa > 1:2010053/1‑100 (MQ=255)
cttccgatcttttCTGCCGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAg < 2:650554/90‑1 (MQ=255)
ggAAAAAAATTTCTGCCGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGc > 1:2515200/1‑100 (MQ=255)
gAAAAAAATTTCTGCCGACCAGGTTGATCAGGAATTTGAACGTTTTCTGATCAGTCAGGCCAAAACATCAGCCCAGCTGGAAACGATCAAAACGAAAGCt > 1:1807649/1‑100 (MQ=255)
gAAAAAAATTTCTGCCGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCt > 2:2764354/1‑100 (MQ=255)
aaaaaaTTTCTGCCGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTgg > 2:2105315/1‑100 (MQ=255)
aaaaaaTTTCTGCCGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTgg > 1:1883283/1‑100 (MQ=255)
aaaaaaTTTCTGCCGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCAGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTgg > 1:765217/1‑100 (MQ=255)
aaaaaTTTCTGCCGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCATCTGGAAACGATCAAAACGAAAGCTGGt < 2:1505460/100‑1 (MQ=255)
aaaaTTTCTGCCGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTGGTg < 1:1513254/100‑1 (MQ=255)
aaaaTTTCTGCCGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTAGGGCCAAAACAACAGCCCAGCTGGAAACGATCAAAACGAAAGCTGGTg > 1:332238/1‑100 (MQ=255)
tttCTGCCGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAgagatcggaag > 1:650558/1‑90 (MQ=255)
tttCTGCCGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTGGTGAAAc > 1:2651464/1‑100 (MQ=255)
ttCTGCCGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTGGTGAAACg > 2:2475134/1‑100 (MQ=255)
cTGCCGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTGGTGAAACGtt > 1:219327/1‑100 (MQ=255)
tGCCGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTGGTGAAACGTTc < 2:2618787/100‑1 (MQ=255)
gCCGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTGGTGAAACGTTCg > 2:1083390/1‑100 (MQ=255)
gCCGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTGGTGAAACGTTCg > 2:1408708/1‑100 (MQ=255)
ccGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTGGTGAAACGTTCgg > 2:2912182/1‑100 (MQ=255)
ccGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTGGTGAAACGTTCgg > 1:2413307/1‑100 (MQ=255)
cgcccAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTGGTGAAACGTTCGGt < 2:2579570/97‑1 (MQ=255)
cGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTGGTGAAACGTTCGGt > 1:487116/1‑100 (MQ=255)
gACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTGGTGAAACGTTCGGTg < 2:595768/100‑1 (MQ=255)
aCCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTGGTGAAACGTTCGGTg < 1:2935871/99‑1 (MQ=255)
aGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTGGTGAAACGTTCGGTgaaga < 1:348435/100‑1 (MQ=255)
aGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTGGTGAAACGTTCGGTgaaga < 1:2696845/100‑1 (MQ=255)
ggTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTGGTGAAACGTTCGGTgaagaa > 1:22672/1‑100 (MQ=255)
ggTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTGGTGAAACGTTCGGTgaagaa > 1:22827/1‑100 (MQ=255)
atttcaTCAGGAAGTTAAACATTATCTAAGCGGTCGGGCCAAGACATCTTCCCAGCTGTCAACAATAACAACGAAAGCTGGTGAAACGTTCGGTgaagaa > 2:683087/6‑100 (MQ=255)
ttGATCAGGAAGTTGAACGTTTTCTTAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTGGTGAAACGTTCGGTGAAGaaaa < 1:1162461/100‑1 (MQ=255)
tGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTGGTGAAACGTTCGGTGAAGaaaaa < 1:2500949/100‑1 (MQ=255)
tGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAAAGATCAAAACGAAAGCTGGTGAAACGTTCGGTGAAGaaaaa > 1:2323697/1‑100 (MQ=255)
gATCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTGGTGAAACGTTCGGTGAAGAAAaag > 1:2571544/1‑100 (MQ=255)
gATCAGGAAGTTGAACGTTTTCTGAGCGGTCGCGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACAAAAGCTGGTGAAACGTTCGGTGAAGAAAaag > 1:1042180/1‑100 (MQ=255)
tCAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCCAAACGCAAGCTGGTCAAACGTTCGGTGAAGAAAaagaa > 2:852950/1‑100 (MQ=255)
cAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTTGTGAAACGTTCGGTGAAGAAAaagaag < 2:2315722/100‑1 (MQ=255)
cAGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTGGTGAAACGTTCGGTGAAGAAAaagaag > 2:1235763/1‑100 (MQ=255)
aGGAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTGGTGAAACGTTCGGTGAAGAAAAAGAAGc > 2:924911/1‑100 (MQ=255)
ggAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAATGATCAAAACGAAAGCTGGTGAAACGTTCGGTGAAGAAAAAGAAGcc < 2:1681630/100‑1 (MQ=255)
ggAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTGGTGAAACGTTCGGTGAAGAAAAAGAAGcc > 2:1796706/1‑100 (MQ=255)
ggAAGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTGGTGAAACGTTCGGTGAAGAAAAAGAAGcc < 1:1427934/100‑1 (MQ=255)
aaGTTGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTGGTGAAACGTTCGGTGAAGAAAAAGAAGCCAt > 2:1061489/1‑100 (MQ=255)
tGAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTGGTGAAACGTTCGGTGAAGAAAAAGAAGCCATCttt > 1:232781/1‑100 (MQ=255)
gAACGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTGGTGAAACGTTCGGTGAAGAAAAAGAAGCCATCTTTg > 2:2285993/1‑100 (MQ=255)
aCGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTGGTGAAACGTTCGGTGAAGAAAAAGAAGCCATCTTTGaa > 1:2551565/1‑100 (MQ=255)
cGTTTTCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTGGTGAAACGTTCGGTGAAGAAAAAGAAGCCATCTTTGAAg > 2:1281954/1‑100 (MQ=255)
tttCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAAGGAAAGATGGTGAAACGTTAGGTGAAGAAAAAGAAGCAATCTTTGa > 1:2550260/1‑95 (MQ=255)
tttCTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTGGTGAAACGTTCGGTGAAGAAAAAGAAGCCATCTTTGAAGGGc > 1:2396878/1‑100 (MQ=255)
cTGAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTGGTGAAACGTTCGGTGAAGAAAAAGAAGCCATCTTTGAAGGGCata > 2:2066851/1‑100 (MQ=255)
gAGCGGTCGGTCCAAGGCATCAGCCCAGCTGGAAACGATCAAAATGAAAGCTGTTGAAACGTTCGGTGAAGAAAAAGAAGCCATCTTTGAAGGGCatat < 1:2577513/99‑1 (MQ=255)
gAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTGGTGAAACGTTCGGTGAAGAAAAAGAAGCCATCTTTGAAGGGCAtatt > 1:1578811/1‑100 (MQ=255)
gAGCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTGGTGAAACGTTCGGTGAAGAAAAAGAAGCCATCTTTGAAGGGCAtatt > 1:1543419/1‑100 (MQ=255)
gCGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTGGTGAAACGTTCGGTGAAGAAAAAGAAGCCATCTTTGAAGGGCAtattat < 1:2288281/100‑1 (MQ=255)
cGGTCGGGCCAAGGCATCAGCCCAGCTGGAAATGATCAAAACGAAAGCTGGTGAAACGTTCGGTGAAGAAAAAGAAGCCATCTTTGAAGGGCAtatta < 1:1604681/98‑1 (MQ=255)
cGGTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTGGTGAAACGTTCGGTGAAGAAAAAGAAGCCATCTTTGAAGGGCATATTAtg > 1:1963297/1‑100 (MQ=255)
ggTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTGGTGAAACGTTCGGTGAAGAAAAAGAAGCCATCTTTGAAGGGCATATTAtgc < 2:2644005/100‑1 (MQ=255)
ggTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTGGTGAAACGTTCGGTGAAGAAAAAGAAGCCATCTTTGAAGGGCATATTAtgc < 2:1543401/100‑1 (MQ=255)
ggTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTGGTGAAACGTTCGGTGAAGAAAAAGAAGCCATCTTTGAAGGGCATATTAtgc > 1:2554978/1‑100 (MQ=255)
ggTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTGGTGAAACGTTCGGTGAAGAAAAAGAAGCCATCTTTGAAGGGCATATTAtgc > 1:886918/1‑100 (MQ=255)
gTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTGGTGAAACGTTCGGTGAAGAAAAAGAAGCCATCTTTGAAGGGCATATTAtgct > 1:40607/1‑100 (MQ=255)
gTCGGGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTGGTGAAACGTTCGGTGAAGAAAAAGAAGCCATCTTTGAAGGGCATATTAtgct > 2:985427/1‑100 (MQ=255)
|
AAGCTCTGCTTCTGAAAGAAGACGAAATTGTCATTGACCGGAAAAAAATTTCTGCCGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGTGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTGGTGAAACGTTCGGTGAAGAAAAAGAAGCCATCTTTGAAGGGCATATTATGCT > NC_000913/2534109‑2534301
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
