Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F212 I0 R1
|
246 |
122.0 |
6097616 |
93.1% |
5676880 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
2,541,456 |
A→G |
100% |
I75T (ATT→ACT) |
cysW ← |
sulfate/thiosulfate ABC transporter permease |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,541,456 | 0 | A | G | 99.1%
| 365.0
/ ‑4.8
| 108 | I75T (ATT→ACT) | cysW | sulfate/thiosulfate ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (51/56); total (51/57) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.82e-01 |
Only 100 of 109 total aligned reads displayed.
GTCCAGTAGCGTCAGCAGTAACTGGCGTCCAGGGAAGTTAAAGCGCGTCACCAGCCAGGCCAGCAGAATGCCGAACACCAGGTTTACCGGTACGGCAATCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGTCCGGATCGGCCAGATTCTGTAAAACCGGCATCAGCCCCTTGCTGAATGCCTGCAC > NC_000913/2541359‑2541553
|
gTCCAGTAGCGTCAGCAGTAACTGGCGTCCAGGGAAGTTAAAGCGCGTCACCAGCCAGGCCAGCAGAATGCCGAACACCAGGTTTACCGGTACGGCAGTc < 2:242022/100‑1 (MQ=255)
tCCAGTAGCGTCAGCAGTAACTGGCGTCCAGGGAAGTTAAAGCGCGTCACCAGCCAGGCCAGCAGAATGCCGAACACCAGGTTTACCGGTACGGCAGTc < 1:2400838/99‑1 (MQ=255)
tCCAGTAGCGTCAGCAGTAACTGGCGTCCAGGGAAGTTAAAGCGCGTCACCAGCCAGGCCAGCAGAATGCCGAACACCAGGTTTACCGGTACGGCAGTCa > 2:2403929/1‑100 (MQ=255)
tCCAGTAGCGTCAGCAGTAACTGGCGTCCAGGGAAGTTAAAGCGCGTCACCAGCCAGGCCAGCAGAATGCCGAACACCAGGTTTACCGGTACGGCAGTCa > 1:1646993/1‑100 (MQ=255)
ccAGTAGCGTCAGCAGTAACTGGCGTCCAGGGAAGTTAAAGCGCGTCACCAGCCAGGCCAGCAGAATGCAGAACACCAGGTTTACCGGTACGGCAGTCa > 1:1983758/1‑99 (MQ=255)
aGTAGCGTCAGCAGTAACTGGCGTCCAGGGAAGTTAAAGCGCGTCACCAGCCAGGCCAGCAGAATGCCGAACACCAGGTTTACCGGTACGGCAGTCAgcg < 1:2527857/100‑1 (MQ=255)
aGCGTCAGCAGTAACTGGCGTCCAGGGAAGTTAAAGCGCGTCACCAGCCAGGCCAGCAGAATGCCGAACACCAGGTTTACCGGTACGGCAGTCAGCGCGa > 2:1288486/1‑100 (MQ=255)
gCGTCAGCAGTAACTGGCGTCCAGGGAAGTTAAAGCGCGTCACCAGCCAGGCCAGCAGAATGCCGAACACCAGGTTTACCGGTACGGCAGTCAGCGCGat < 1:1199467/100‑1 (MQ=255)
cGTCAGCAGTAACTGGCGTCCAGGGAAGTTAAAGCGCGTCACCAGCCAGGTCAGCAGAATGCCGAACACCAGGTTTACCGGTACGGCAGTCAGCGCGatc < 1:2310900/100‑1 (MQ=255)
cGTCAGCAGTAACTGGCGTCCAGGGAAGTTAAAGCGCGTCACCAGCCAGGCCAGCAGAATGCCGAACACCAGGTTTACCGGTACGGCAGTCAGCGCGatc > 2:2814785/1‑100 (MQ=255)
gTCAGCAGTAACTGGCGTCCAGGGAAGTTAAAGCGCGTCACCAGCCAGGCCAGCAGAATGCCGAACACAAGATTTACCAATACGGCAGTCAGCGCGataa > 1:1893547/1‑98 (MQ=255)
tCAGCAGTAACTGGCGTCCAGGGAAGTTAAATCGCTTCACCAGCTAGGCCAGCAGAATGCCGAACACCAGGTTTACCGGTACGGCAGTCAGCGCGatca < 1:2335366/99‑1 (MQ=255)
ctcttccgatcTGGCGTCCAGGGAAGTTAAAGCGCGTCACCAGCCAGGCCAGCAGAATGCCGAACACCAGGTTTACCGGTACGGCAGTCAGCGCGatcat < 1:2203903/90‑1 (MQ=255)
agcagTAACTGGCGTCCAGGGAAGTTAAAGCGCGTCACCAGCCAGGCCAGCAGAATGCCGAACACCAGGTTTACCGGTACGGCAGTCAGCGCGAtcatca > 1:2626283/1‑100 (MQ=255)
cagTAACTGGCGTCCAGGGAAGTTAAAGCGCGTCACCGGCCAGGCCAGCAGAATGCCGAACACCAGGTTTACCGGTACGGCAGTCAGCGCGATCATCAcc > 2:1610040/1‑100 (MQ=255)
gTAACTGGCGTCCAGGGAAGTTAAAGCGCGTCACCAGCCAGGCCAGCAGAATGCCGAACACCAGGTTTACCGGTACGGCAGTCAGCGCGATCATCACCGt < 1:855522/100‑1 (MQ=255)
gTAACTGGCGTCCAGGGAAGTTAAAGCGCGTCACCAGCCAGGCCAGCAGAATGCCGAACACCAGGTTTACCGGTACGGCAGTCAGCGCGATCATCACCGt > 2:1783240/1‑100 (MQ=255)
gTAACTGGCGTCCAGGGAAGTTAAAGCGCGTCACCAGCCAGGCCAGCAGAATGCCGAACACCAGGTTTACCGGTACGGCAGTCAGCGCGATCATCACCGt > 2:1891187/1‑100 (MQ=255)
cTGGCGTCCAGGGAAGTTAAAGCGCGTCACCAGCCAGGCCAGCAGAATGCCGAACACCAGGTTTACCGGTACGGCAGTAAGCGCGATCATCACCGTCAGc > 2:1041867/1‑100 (MQ=255)
tGGCGTCCAGGGAAGTTAAAGCGCGTCACCAGCCAGGCCAGCAGAATGCCGAACACCAGGTTTACCGGTACGGCAGTCAGCGCGATCATCACCGTCAGcc < 1:1876673/100‑1 (MQ=255)
gCGTCCAGGGAAGTTAAAGCGCGTCACCAGCCAGGCCACCAGAATGCCGAACACCAGGATTACCGGTACGGCAGTCAGCGCGATCATCACCGTCAGCCAg < 2:1646974/100‑1 (MQ=255)
cGTCCAGGGAAGTTAAAGCGCGTCACCAGCCAGGCCAGCAGAATGCCGAACACCAGGTTTACCGGTACGGCAGTCAGCGCGATCATCACCGTCAGCCAGa > 2:1911698/1‑100 (MQ=255)
ccAGGGAAGTTAAAGCGCGTCACCAGCCAGGCCAGCAGAATGCCGAACACCAGGTTTACCGGTACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATgg < 1:1891209/100‑1 (MQ=255)
cAGGGAAGTTAAAGCGCGTCACCAGCCAGGCCAGCAGAATGCCGAACACCAGGTTTACCGGTACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGc > 1:3045293/1‑100 (MQ=255)
cAGGGAAGTTAAAGCGCGTCACCAGCCAGGCCAGCAGAATGCCGAACACCAGGTTTACCGGTACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGc > 2:2996249/1‑100 (MQ=255)
cAGGGAAGTTAAAGCGCGTCACCAGCCAGGCCAGCAGAATGCCGAACACCAGGTTTACCGGTACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGc > 1:1217061/1‑100 (MQ=255)
aGGGAAGTTAAAGCGCGTCACCAGCCAGGCCAGCAGAATGCCGAACACCAGGTTTACCGGTACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATgg < 2:137342/98‑1 (MQ=255)
aGGGAAGTTAAAGCGCGTCACCAGCCAGGCCAGCAGAATGCCGAACACCAGGTTTACCGGTACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCg < 2:254244/100‑1 (MQ=255)
gggAAGTTAAAGCGCGTCACCAGCCAGGCCAGCAGAATGCCGAACACCAGGTTTACCGGTACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGt > 1:190108/1‑100 (MQ=255)
aaGTTAAAGCGCGTCACCAGCCAGGCCAGCAGAATGCCGAACACCAGGTTTACCGGTACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTgca < 1:1901344/100‑1 (MQ=255)
aGTTAAAGCGCGTCACCAGCCAGGCCAGCAGAATGCCGAACACCAGGTTTACCGGTACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTgcag > 1:2474928/1‑100 (MQ=255)
gTTAAAGCGCGTCACCAGCCAGGCCAGCAGAATGCCGAACACCAGGTTTACCGGTACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTgcagc > 2:278740/1‑100 (MQ=255)
gTTAAAGCGCGTCACCAGCCAGGCCAGCAGAATGCCGAACACCAGGTTTACCGGTACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTgcagc > 2:88651/1‑100 (MQ=255)
ttAAAGCGCGTCACCAGCCAGGCCAGCAGAATGCCGAACACCAGGTTTACCGGTACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTgcagca < 2:647609/100‑1 (MQ=255)
ttAAAGCGCGTCACCAGCCAGGCCAGCAGAATGCCGAACACCAGGTTTACCGGTACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTgcagca > 1:1770612/1‑100 (MQ=255)
ttAAAGCGCGTCACCAGCCAGGCCAGCAGAATGCCGAACACCAGGTTTACCGGTACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTgcagca > 1:2904083/1‑100 (MQ=255)
tAAAGCGCGTCACCAGCCAGGCCAGCAGAATGCCGAACACCAGGTTTACCGATACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCAt > 1:947474/1‑100 (MQ=255)
aaGCGCGTCACCAGCCAGGCCAGCAGAATGCCGAACACCAGGTTTACCGGTACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGt < 1:2570509/100‑1 (MQ=255)
aaGCGCGTCACCAGCCAGGCCAGCAGAATGCCGAACACCAGGTTTACCGATACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGt > 1:761292/1‑100 (MQ=255)
aGCGCGTCACTATCTAGTCTAGCAGAATGTTGATCTCCAGGTTTACCGGTACGGCAGTCCGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGTc < 1:1646485/100‑1 (MQ=255)
cgcgTCACCAGCCAGGCCAGCAGAATGCCGAACACCAGGTTTACCGGTACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGTCCg < 2:311330/100‑1 (MQ=255)
gcgTCACCAGCCAGGCCAGCAGAATGCCGAACACCAGGTTTACCGGTACGGCAGTCAGCGCGATCAACACCATCAGCCAGATGGCGTGCAGCATGTcc > 1:1657167/1‑98 (MQ=255)
tCACCAGCCAGGCCAGCAGAATGCCGAACACCAGGTTTACCGGTACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGTCCGGATc > 2:1246823/1‑100 (MQ=255)
ccagccagGCCAGCAGAATGCCGAACACCAGGTTTACCGGTACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGTCCGGATCGGc < 2:2696280/100‑1 (MQ=255)
ccagccagGCCAGCAGAATGCCGAACACCAGGTTTACCGGTACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGTACGGATCGGc > 2:731442/1‑100 (MQ=255)
cagccagGCCAGCAGAATGCCGAACACCAGGTTTACCGGTACGGCAGTCAGCGCGATCATCACCGACAGCCAGATGGCGTGCAGAATGTCCGGATCGGcc > 1:248572/1‑100 (MQ=255)
agccagGCCAGCAGAATTCCGAACACCAGTTTTACCGGTACGTCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGTCCGGATCgg < 2:1311256/97‑1 (MQ=255)
agccagGCCAGCAGAATGCCGAACACCAGGTTTATCGGTACGGTAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGTCCGGATCGGCCa < 1:2331435/100‑1 (MQ=255)
gccaggccagCAGAATGCCGAACACCAGGTTTACCGGTACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGTCCGGATCGGCCAg < 1:530929/100‑1 (MQ=255)
ggccagCAGAATGCCGAACACCAGGTTTACCGGTACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGTCCGGATCGGCCAGATTc < 2:2296776/100‑1 (MQ=255)
ggccagCAGAATGCCGAACACCAGGTTTACCGGTACGGCAGTCAGCGCGATCAACACCGTCAGCCAGATGGCGTGCAGCATGTCCGGATCGGCCAGATTc > 1:900290/1‑100 (MQ=255)
gccagCAGAATGCCGAACACCAGGTTTACCGGTACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGTCCGGATCGGCCAGATTCt > 1:525005/1‑100 (MQ=255)
cagcagAATGCCGAACACCAGGTTTACCGGTACGGCAGTCAGCGCTATCATCACCGTCAGCCAGATGGCGTGCAGCATGTCCGGATCGGCCAGATTCTGt < 1:38794/100‑1 (MQ=255)
agcagAATGCCGAACACCAGGTTTACCGGTACGGCAGTCAGCGTGATCATCACCGTCAGCCAGATGGCGTGCAGCATGTCCGGATCGGCCAGATTCTGTa < 1:653930/100‑1 (MQ=255)
agcagAATGCCGAACACCAGGTTTACCGGTACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGTCCGGATCGGCCAGATTCTGTa < 1:3013319/100‑1 (MQ=255)
agcagAATGCCGAACACCAGGTTTACCGGTACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGTCCGGATCGGCCAGATTCTGTa < 2:2763643/100‑1 (MQ=255)
gcagAATGCCGAACACCAGGTTTACCGGTACGGCAGTCAGCGCGATCATCACCGTCATCCAGATGGCGTGCAGCATGTCCGGATCGGCCAGATTCTGTa < 2:1657147/99‑1 (MQ=255)
gcagAATGCCGAACACCAGGTTTACCGGTACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGTCCGGATCGGCCAGATTCTGTaa > 2:3010872/1‑100 (MQ=255)
aTGCCGAACACCAGGTTTACCGGTACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGTCCGGATCGGCCAGATTCTGTAAAACCG > 1:357611‑M1/1‑100 (MQ=255)
gCCGAACACCAGGTTTACCGGTACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGTCCGGATCGGCCAGATTCTGTAAAACCGGC < 1:1911721‑M1/100‑1 (MQ=255)
ccGAACACCAGGTTTACCGGTACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGTCCGGATCGGCCAGATTCTGTAAAACCGGCA < 1:1099292‑M1/100‑1 (MQ=255)
ccGAACACCAGGTTTACCGGTACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGTCCGGATCGGCCAGATTCTGTAAAACCGGCA < 1:2723218‑M1/100‑1 (MQ=255)
ccGAACACCAGGTTTACCGGTACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGTCCGGATCGGCCAGATTCTGTAAAACCGGCA < 1:1246835‑M1/100‑1 (MQ=255)
acacCAGGTTTACCGGTACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGTCCGGATCGGCCAGATTCTGTAAAACCGGCATCAg < 2:718528/100‑1 (MQ=255)
cacCAGGCTCACCCGTACGGCAGACAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATATCCGGATCGGCCAGAGTCTGTAAAACCGGCATCAGc > 2:114245/1‑100 (MQ=255)
acCAGGTTTACCGGTACGGCAGTCAGCGCGATCATCACCTTCATCCAGATGGCATACAGCATATCATAAACGGCCAGATTCTGTAAAACCAGCa > 1:9342/1‑94 (MQ=255)
acCAGGTTTACCGGTACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGTCCGGATCGGCCAGATTCTGTAAAACCGGCATCAGcc > 1:1070866/1‑100 (MQ=255)
ccAGGTTTACCGGTACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGTCCGGATCGGCCAGATTCTGTAAAACCGGCATCAGccc > 1:617912/1‑100 (MQ=255)
ccAGGTTTACCGGTACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGTACGGATCGGCCAGATTCTGTAAAAACGGCATCAGcc > 1:2837128/1‑99 (MQ=255)
cAGGTTTACCGGTACGGCAGTCAGCGCGATCATCACCGTCAGCTAGATGGCGTGCAGCATGTCCGGATCGGCCAGATTCTGTAAAACCGGCATCAGcccc > 2:1018228/1‑100 (MQ=255)
aGGTTTACCGGTACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGTCCGGATCGGCCAGATTCTGTAAAACCGGCATCAGccccn < 2:1737403/100‑2 (MQ=255)
aGGTTTACCGGTACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGTCCGGATCGGCCAGATTCTGTAAAACCGGCATCAGCCCCt < 1:2245443/100‑1 (MQ=255)
tttACCGGTACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGTCCGGATCGGCCAGATTCTGTAAAACCGGCAGCAGCCCCTTGc < 2:949080/100‑1 (MQ=255)
ttACCGGTACGGCAGTCAGCACGATCATCACCGTCAGCCAGATGGCGTGCAGCATCTCCGGATCGGCCAGATTCTGTAAAACCGGCATCAGCCCCTTGCt > 2:591553/1‑100 (MQ=255)
tACCGGTACGGCAGTCAGCGCGATCATCATCGTCAGCCAGATGGCGTGCAGCATGTCCGGATCGGCAAGATTCTGTAAAACCGGCATCAGCCCCTTGCTg < 2:1826593/100‑1 (MQ=255)
tACCGGTACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGTCCGGATCGGCCAGATTCTGTAAAACCGGCATCAGCCCCTTGCTg < 2:1562341/100‑1 (MQ=255)
aCCGGTACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGTCCGGATCGGCCAGATTCTGTAAAACCGGCATCAGCCCCTTGCTGa > 1:2029019/1‑100 (MQ=255)
aCCGGTACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGTCCAGATCAGCCAGATTCTGTAAAACCGGCATCAGCCCCTTGCTGa > 1:882744/1‑100 (MQ=255)
ccGGTACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGTCCGGATCGGCCAGATTCTGTAAAACCGGCATCAGCCCCTTGCTGAa < 1:2562573‑M2/100‑2 (MQ=255)
ggTACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGTCCGGATCGGCCAGATTCTGTAAAACCGGCATCAGCCCCTTGCTGAatg > 1:1041874‑M2/1‑97 (MQ=255)
tACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGTCCGGATCGGCCAGATTCTGTAAAACCGGCATtcagcaaggggctgatgcc < 1:2314459‑M1/100‑20 (MQ=255)
tACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGTCCGGATCGGCCAGATTCTGTAAAACCGGCATtcagcaaggggctgatgcc < 2:2631022‑M1/100‑20 (MQ=255)
tACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGTCCGGATCGGCCAGATTCTGTAAAACCGGCATCAGCCCCTTGCTGAatgcc > 2:1343087‑M2/1‑95 (MQ=255)
tACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGTCCGGATCGGCCAGATTCTGTAAAACCGGCATCAGCCCCTTGCTGAatgcc > 1:721638‑M2/1‑95 (MQ=255)
tACGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGTCCGGATCGGCCAGATTCTGTAAAACCGGCATCAGCCCCTTGCTGAatgc > 1:1973717‑M2/1‑95 (MQ=255)
tACGGCAGTCAGAGCGATCATTACCGTCAGCCAGATGGCGTGCAGCATGTCCGGATCGGCAAGATTCTGTACAACCGGTATtcagcaaggggctgatgcc < 2:133822‑M1/100‑20 (MQ=255)
tACGGCAGGCAGCGCGATCACCACCGACAGCCAGATGGCGTGCAGCATGTCCGTATCGGCCAGATTCTGTAAAACCGGCATtcagcaaggggctgatgcc < 2:1159528‑M1/100‑20 (MQ=255)
aCGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGTCCGGATCGGCCAGATTCTGTAAAACCGGCATtcagcaaggggctgatgccg < 1:1606168‑M1/100‑21 (MQ=255)
aCGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGTCCGGATCGGCCAGATTCTGTAAAACCGGCATCAGCCCCTTGCTGAATGCCt < 2:1770592/100‑1 (MQ=255)
aCGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGTCCGGATCGGCCAGATTCTGTAAAACCGGCATCAGCCCCTTGCTGAATGCCt < 2:2604117/100‑1 (MQ=255)
cGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGTGTTCAGCATTTCCGGATCGGCCAGATTCTGTAAAACCGGCATCAGCCCCTTGCTGAATGCCTg < 1:783504/100‑1 (MQ=255)
cGGCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGTCCGGATCGGCCAGATTCTGTAAAACCGGCATCAGCCCCTTGCTGAatagatc < 2:658372‑M2/100‑8 (MQ=255)
ggCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGTCCGGATCGGCCAGATTCTGTAAAACCGGCATCAGCCCCTTGCTGAATGCCTGc < 2:112751/100‑1 (MQ=255)
ggCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGTCCGGATCGGCCAGATTCTGTAAAACCGGCATCAGCCCCTTGCTGAATGCCTGc < 2:1204983/100‑1 (MQ=255)
ggCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGTCCGGATCGGCCAGATTCTGTAAAACCGGCATCAGCCCCTTGCTGAATGCCTGc < 2:183796/100‑1 (MQ=255)
ggCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGTCCGGATCGGCCAGATTCTGTAAAACCGGCATCAGCCCCTTGCTGAATGCCTGc < 2:901967/100‑1 (MQ=255)
gCAGTCAGCGCGATCTTCACCGTCAGCCAGATGGCGTGCAGCATGTCCGGATCGGCCAGATTCTGTAAAACCGGCATCAGCCCCTTGCTGAATGCCTGCa < 1:1047039/100‑1 (MQ=255)
gCAGTCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGTCCGGATCGGCCAGATTCTGTAAAACCGGCATCAGCCCCTTGCTGAATGCCTGCa > 2:1257052/1‑100 (MQ=255)
gCAGTCAGCGCGATCATCACCGTCAGCAAGATGGCGTGCAGCATGTCCGGATCGGCCAGATTCTGTAAAACCGGCATtcagcaaggggctgatgccggt < 1:723930‑M1/99‑23 (MQ=255)
cAATCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGTCCGGATCGGCCAGATTCTGTAAAACCGGCATCAGCCCCTTGCTGAATGCCTGCAc < 2:2541509/100‑1 (MQ=255)
|
GTCCAGTAGCGTCAGCAGTAACTGGCGTCCAGGGAAGTTAAAGCGCGTCACCAGCCAGGCCAGCAGAATGCCGAACACCAGGTTTACCGGTACGGCAATCAGCGCGATCATCACCGTCAGCCAGATGGCGTGCAGCATGTCCGGATCGGCCAGATTCTGTAAAACCGGCATCAGCCCCTTGCTGAATGCCTGCAC > NC_000913/2541359‑2541553
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
