Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F56 I0 R1
|
215 |
141.2 |
6785521 |
95.3% |
6466601 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
2,563,518:1 |
(A)5→6 |
100% |
intergenic (+401/‑74) |
yffP → / → yffQ |
CPZ‑55 prophage; uncharacterized protein/CPZ‑55 prophage; uncharacterized protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,563,513 | 1 | . | A | 96.1%
| 429.4
/ 9.0
| 127 | intergenic (+396/‑79) | yffP/yffQ | CPZ‑55 prophage; uncharacterized protein/CPZ‑55 prophage; uncharacterized protein |
| Reads supporting (aligned to +/- strand): ref base . (4/1); new base A (65/57); total (69/58) |
| Fisher's exact test for biased strand distribution p-value = 3.75e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 139 total aligned reads displayed.
GGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGT‑A‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGAAACTTTTAA > NC_000913/2563415‑2563604
|
ggTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGT‑a < 2:2778780/100‑1 (MQ=255)
ggTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGT‑a > 1:1441854/1‑100 (MQ=255)
ggTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGT‑a > 1:1820608/1‑100 (MQ=255)
tGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGT‑a‑a‑a > 1:117276/1‑100 (MQ=255)
tGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAAAAAAATAAAGATGGGAGGT‑a‑a‑a > 1:544311/1‑100 (MQ=255)
ttttTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGAAGTTCCCAACAACAAAATAAAGATGGGAGGT‑a‑a‑a‑aaatg < 1:2312431/100‑4 (MQ=255)
tttGTGATGCAGATCGCTTTTTCCCTGCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGT‑a‑a‑a‑aaatg < 1:1033103/100‑4 (MQ=255)
ttGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGT‑a‑a‑a‑aaatga < 1:507620/100‑5 (MQ=255)
ttGTGATGCAGATCGCTTTTTCACTTCAGGCATTTTTTTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGT‑AGA‑A‑AATGa > 1:1815249/1‑100 (MQ=255)
tgtgATGCAGGTCGCTTTTTCCCTTCAGGCATTTTAGTTTAATGCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGT‑a‑a‑a‑aaatgaa < 1:298247/100‑6 (MQ=255)
tgtgATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTACCCAAAAACAAAATAAAGATGGGAGGT‑a‑a‑a‑aaatgan < 1:1815504/100‑6 (MQ=255)
tgtgATGCAGATCGCTTTTTCCCTTCAGGCATCTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGT‑a‑a‑a‑aaatgaa < 1:609773/100‑6 (MQ=255)
gtgATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGaaa > 2:1376946/1‑100 (MQ=255)
aTGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACgg < 2:1441860/100‑1 (MQ=255)
tGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGt > 1:2709580/1‑100 (MQ=255)
tGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGt > 2:2026498/1‑100 (MQ=255)
tGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGt > 2:2566766/1‑100 (MQ=255)
gCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTg < 1:1229254/100‑1 (MQ=255)
cAGATCGTTTTTTTCCTTAAGGCATTTTTGTTTAATTCAATCAATGAAAGGCAGTTCTCAATATCAAAATAAAGATGGGAGGT‑A‑ATA‑AATGAAACGGTg > 1:2394403/1‑99 (MQ=255)
cAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTgg < 1:791900/100‑1 (MQ=255)
aGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCAAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACg > 1:1276865/1‑95 (MQ=255)
gATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGa > 2:1182261/1‑100 (MQ=255)
gATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGa > 2:1609507/1‑100 (MQ=255)
aTCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGaa < 2:451697/100‑1 (MQ=255)
gCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTg > 2:1711539/1‑100 (MQ=255)
gCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTg < 1:2508874/100‑1 (MQ=255)
gCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTg > 2:1711553/1‑100 (MQ=255)
cTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTgg > 2:701358/1‑100 (MQ=255)
cccTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTAc > 1:804771/1‑100 (MQ=255)
cccTTCAGGCATTTTTGTTTAATTCAAGCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTAc > 1:805016/1‑100 (MQ=255)
ccTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACt > 2:2037062/1‑100 (MQ=255)
cTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTg > 2:2119190/1‑100 (MQ=255)
tCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTAc < 1:2856052/96‑1 (MQ=255)
tCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGt < 1:930114/100‑1 (MQ=255)
cAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTg < 1:3262002/100‑1 (MQ=255)
aGGCATTTTTGTTTAAATCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTg < 2:3034693/99‑1 (MQ=255)
ggCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGAt < 2:39066/100‑1 (MQ=255)
ggCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGAt > 2:2551698/1‑100 (MQ=255)
gCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATg < 2:1606464/100‑1 (MQ=255)
cATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGAGAAGTGGCTTTACTGGTGATgg > 1:2872206/1‑100 (MQ=255)
aTTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCTACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGt < 2:3226644/100‑1 (MQ=255)
aTTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATg < 1:1771672/98‑1 (MQ=255)
aTTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGt < 2:635418/100‑1 (MQ=255)
tttGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAAt > 2:343650/1‑100 (MQ=255)
tttAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTg > 2:139875/1‑100 (MQ=255)
ttAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTgg < 1:953290/100‑1 (MQ=255)
ttAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTgg > 1:310124/1‑100 (MQ=255)
ttAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTgg > 2:446157/1‑100 (MQ=255)
ttAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTgg < 2:531638/100‑1 (MQ=255)
aaTTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGtt > 2:569037/1‑100 (MQ=255)
aTTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGttt < 2:2849188/100‑1 (MQ=255)
aTTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGAAGGTAATGTTGGttt > 1:1940735/1‑100 (MQ=255)
aTTCAAGCAACGAAAGGCAGTTCCCAAGAACAAAAAAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGttt < 1:2146689/100‑1 (MQ=255)
ttCCATCAACGAAAGGCATTTCCCAACAACAAAAGAAAGATGGGAGGG‑A‑A‑ACAATGAAACGGTGGGAAGTGGCTTTACTGGTGACGGTAATGTGGGttt > 1:159122/1‑99 (MQ=255)
ttCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTg < 2:787661/100‑1 (MQ=255)
ttCAAGCAAAGAAAGGCAGTGCCCAACAACAAAAGAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTgggt < 1:2623950/98‑3 (MQ=255)
tcaatcaaCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGc < 1:2522066/100‑1 (MQ=255)
caatcaaCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCt > 2:1545244/1‑100 (MQ=255)
caatcaaCGAAAGGCAGTTCCCAACAACAAAATAAAGAGGGGAGGTAA‑A‑A‑AATGAAACGGGGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCt > 2:154934/1‑100 (MQ=255)
aatcaaCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTg < 2:1397421/100‑1 (MQ=255)
aatcaaCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTg < 2:2050153/100‑1 (MQ=255)
aatcaaCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTg > 1:1688150/1‑100 (MQ=255)
aatcaaCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTg > 2:672850/1‑100 (MQ=255)
atcaaCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGt > 1:1072085/1‑100 (MQ=255)
atcaaCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGt < 2:2447959/100‑1 (MQ=255)
tcaaCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTa < 2:52117/100‑1 (MQ=255)
caaCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTAt > 1:3374453/1‑100 (MQ=255)
aaCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTAtt < 2:862843/100‑1 (MQ=255)
aaCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTAtt > 2:3305745/1‑100 (MQ=255)
aaCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTAtt > 1:2083166/1‑100 (MQ=255)
aaCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTAtt > 1:3046778/1‑100 (MQ=255)
aCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGGGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTAtt < 1:2117331/99‑1 (MQ=255)
aCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGT‑A‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGa < 2:3013735/100‑1 (MQ=255)
aaaGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAAc < 2:1805946/100‑1 (MQ=255)
aGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACtg < 2:1718897/100‑1 (MQ=255)
ggCAGTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACtgt > 2:1377707/1‑100 (MQ=255)
gTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAag > 2:1820376/1‑100 (MQ=255)
gTTCCCAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAag < 1:701355/100‑1 (MQ=255)
cccAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAaggag > 2:263841/1‑100 (MQ=255)
cccAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAaggag < 2:102015/100‑1 (MQ=255)
cccAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAaggag > 1:2442781/1‑100 (MQ=255)
cccAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAaggag < 2:303114/100‑1 (MQ=255)
ccAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAaggagg > 2:1092397/1‑100 (MQ=255)
ccAACAACAAAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAaggagg > 1:57365/1‑100 (MQ=255)
caacaacaaAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAggagga > 1:1092286/1‑100 (MQ=255)
caacaaAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGc > 1:276727/1‑100 (MQ=255)
caacaaAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGc > 1:2646938/1‑100 (MQ=255)
acaaAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCa < 1:407205/100‑1 (MQ=255)
acaaAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCa < 1:154934/100‑1 (MQ=255)
acaaAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACGGTGAAGGAGGACGCCa > 1:1980270/1‑100 (MQ=255)
caaAATAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCAt < 2:2865464/100‑1 (MQ=255)
aaaaTAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATg < 2:2709602/100‑1 (MQ=255)
aaaTAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGa > 2:2187419/1‑100 (MQ=255)
aaTAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGaa > 2:1618166/1‑100 (MQ=255)
tAAAGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGAAAc < 2:3256525/100‑1 (MQ=255)
aaGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGAAACtt > 1:16182/1‑100 (MQ=255)
aaGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGAAACtt > 2:687468/1‑100 (MQ=255)
aGATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGAAACttt < 2:478443/100‑1 (MQ=255)
gATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTTAACTGTGAAGGAGGACGCCATGAAACtttt > 1:395268/1‑100 (MQ=255)
gATGGGAGGTAA‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGAAACtttt < 1:1376940/100‑1 (MQ=255)
|
GGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGT‑A‑A‑A‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGAAACTTTTAA > NC_000913/2563415‑2563604
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
