Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F212 I0 R1
|
246 |
122.0 |
6097616 |
93.1% |
5676880 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,622,796 |
T→G |
100% |
L1202R (CTG→CGG) |
rhsB → |
Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,622,796 | 0 | T | G | 95.8%
| 338.1
/ 6.2
| 141 | L1202R (CTG→CGG) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
| Reads supporting (aligned to +/- strand): ref base T (2/4); new base G (81/53); total (84/57) |
| Fisher's exact test for biased strand distribution p-value = 2.24e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.27e-01 |
Only 100 of 143 total aligned reads displayed.
ATGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAGGGGCGATATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAACCTGTATGGAT > NC_000913/3622700‑3622891
|
atgatgAATGGGGCAACCTGCTGAATGAAGAGAGCCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGGCCGGCCGGt > 2:1998772/1‑99 (MQ=255)
tgatgaATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTAt > 1:2111038/1‑100 (MQ=25)
tgatgaATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTAt > 1:2794643/1‑100 (MQ=25)
gatgaATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTAtt < 2:1828378/100‑1 (MQ=18)
tgaATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTAc > 2:225148/1‑100 (MQ=18)
tgaATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAAGAAACCGACCGGTATTa > 1:67336/1‑99 (MQ=11)
gaATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACa < 2:2567218/100‑1 (MQ=18)
gaATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACa > 2:1950858/1‑100 (MQ=18)
tGGGGCAACCTGCTGAATGAAGAGAACTCGTATCAGTTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAAcc < 1:963956/100‑1 (MQ=11)
tGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAAcc < 1:1037240/100‑1 (MQ=17)
gggCAACCTGATGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCAGGGCAGCAGTATGACGAGCAGTCCGGCCGGTCTTACAccc > 2:2869085/1‑98 (MQ=11)
ggCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGcc < 2:1531476/100‑1 (MQ=18)
ggCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGcc < 2:530613/100‑1 (MQ=17)
gCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGCCa > 1:2294589/1‑100 (MQ=18)
aaCCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGCCAcc < 2:2254009/100‑1 (MQ=18)
ccTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGc < 2:2509045/100‑1 (MQ=18)
ccTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGc > 1:2509074/1‑100 (MQ=18)
gctgAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCtat > 2:2644616/1‑100 (MQ=17)
gctgAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCtat > 2:952415/1‑100 (MQ=18)
ctgAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCtatt < 1:874012/100‑1 (MQ=17)
ctgAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCtatt < 1:2933882/100‑1 (MQ=18)
tgaatgaaGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCtatta > 1:2025574/1‑100 (MQ=18)
gaatgaaGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCtattat > 2:2925277/1‑100 (MQ=17)
gaatgaaGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCtattat > 1:1099523/1‑100 (MQ=17)
gaatgaaGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCtattat < 2:2395719/100‑1 (MQ=18)
atgaaGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCTATTATGa > 1:1368437/1‑100 (MQ=18)
tgaaGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑c > 2:539290/1‑100 (MQ=18)
tgaaGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCGATTATGa > 2:218846/1‑99 (MQ=12)
aaGAGAACCCGCTTCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGACGAGTCCGGCCGGTATTACATCCGCCACCGCTATTATGA‑c < 2:2810852/98‑1 (MQ=11)
aaGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑ccc > 2:939219/1‑100 (MQ=17)
aaGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑ccc > 1:2241971/1‑100 (MQ=18)
aaGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑ccc > 1:1287707/1‑100 (MQ=18)
aaGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAATCCGGCCGGTATTACAACCGACACCGCTAAAATGA‑ccc > 1:1002077/1‑100 (MQ=11)
aagaACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGc > 2:1149540/2‑100 (MQ=17)
gaACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCtattatagatcgga > 1:64883/1‑91 (MQ=11)
gaACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTg > 1:2850447/1‑100 (MQ=18)
cccGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAg > 2:2141623/1‑100 (MQ=17)
cccGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAg > 1:1055481/1‑100 (MQ=18)
cccGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAg > 1:2218480/1‑100 (MQ=18)
ccGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAgg > 2:1400799/1‑100 (MQ=17)
ccGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAgg > 1:2000332/1‑100 (MQ=18)
ccGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCAGCTGCAg > 1:1552025/1‑99 (MQ=16)
gCATAAGCTGCAGCAGGTTATTCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAgggg < 1:426686/100‑1 (MQ=11)
atctCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAgggg < 1:1702765/97‑1 (MQ=255)
cATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAGGGGc < 1:403274/100‑1 (MQ=17)
aTCAGCTTCAGCAGCTTATCCGGCTGCCGGGGCAGCATTATTATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAGGGGCg < 1:2538343/100‑1 (MQ=255)
aTCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAGGGGCg < 2:596876/100‑1 (MQ=17)
aTCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAGGGGCg < 1:439827/100‑1 (MQ=17)
cAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAGGGGAGat > 2:1702745/1‑100 (MQ=9)
cAGCTGCAGCAGCGTATCCGGCTGCCGGGCCAGCATTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAGGGGCGat < 2:1486952/100‑1 (MQ=11)
aGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAGGGGCGata > 2:2033416/1‑100 (MQ=17)
aGCTGCAGCAGCTCATCCGGCTGCCTGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGGAGGGGCGa < 2:1751721/98‑1 (MQ=11)
cTGCAGCAGCTTATGCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCTTTTATGA‑CCCGCTGCAGGGGCGata < 2:864754/98‑1 (MQ=255)
tGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAGGGGCGatata < 2:2808715/99‑1 (MQ=18)
gcagcaGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAGGGGCGATATATc > 1:2983987/1‑100 (MQ=18)
gcagcaGCGTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAGGGGCGatatatt < 2:2864468/100‑2 (MQ=12)
cagcagCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAGGGGCGATATATCa < 1:2496521/100‑1 (MQ=17)
gcagcTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAGGGGCGATATATCACt > 1:2737324/1‑100 (MQ=18)
agcTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAGCCGCCACCGCTATTATGA‑CCCGCTGCAGGGGCGATATATCACTc < 1:2150938/99‑1 (MQ=12)
agcTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAGGGGCGATATATCACTCa > 1:2641986/1‑100 (MQ=17)
gcTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGATATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAGGGGCGataagatcggaag > 1:1749404/1‑90 (MQ=11)
cTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAGGGGCGATATATCACTCAgg < 2:176461/100‑1 (MQ=18)
aTCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAGGGGCGATATATCACTCAGGATc > 1:2700891/1‑100 (MQ=17)
tCCGGCTGCCGGGGCAGGAGTATGATGAGAGGTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAGTGGCGATATATCACTCAGGATcc < 2:2309481/100‑1 (MQ=11)
ccGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAGGGGCGATATATCACTCAGGATCCGATTGGAc > 1:2815111/1‑100 (MQ=14)
ccGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAGGGGCGATATATCAATCAGGATACGATTGGAc > 1:1174936/1‑100 (MQ=255)
cGGGGCAGCAGTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAGGGGCGATATATCACTCAGGATCCGATTGGACt > 1:3021221/1‑100 (MQ=17)
gcagcaGTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCACTGCAGGGGCGATATATCACTCAGGATCCGATTGGACTGAAg < 1:2101913/100‑1 (MQ=255)
cagcagTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAGGGGCGATATATCACTCAGGATCCGATTGGACTGAAgg > 1:1967951/1‑100 (MQ=25)
gcagTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAGGGGCGATATATCACTCAGGATCCGATTGGACTGAAgggg > 1:1636182/1‑100 (MQ=255)
cagTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAGGGGCGATATATCACTCAGGATCCGATTGGACTGAAggggg > 1:2905372/1‑100 (MQ=25)
cagTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAGGGGCGATATATCACTCAGGATCCGATTGGACTGAAggggg < 1:1947038/100‑1 (MQ=38)
cagTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGATGCAGGAGCGATAAATCACTCAGGATCCGATTGGACTGAAggggg > 1:112231/1‑100 (MQ=11)
agTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAGGGGCGATATATCACTCAGGATCCGATTGGACTGAAgggggg > 2:2103644/1‑100 (MQ=38)
agTATGATGAGGAGTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAGGGGCGATATATCACTCAGGATCCGATTGGACTGAAgggggg < 2:2983954/100‑1 (MQ=255)
agTATGATGAGGAGTCCGGCCGGTATGACAACCGCCACCGCTATTATGA‑CCCGCTGCAGGGGCGATATATCACTCAGGATCCGATTGGACTGAAgggggg < 2:2861624/100‑1 (MQ=255)
tATGATGAGGAGTACGGCCGGTATTACAACCACCACCGCTATGATGA‑CCCGCTGCAGGGGCGATATATCACTCAGGATCCGATTGGACTGAAGGGGGGAt > 1:2046761/1‑100 (MQ=11)
atgatgAGGAGTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAGGGGCGATATATCACTCAGGATCCGATTGGACTGAAGGGGGGATg < 2:1642834/100‑1 (MQ=255)
tgatgaGGGGTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAGGGGCGATATATCACTCAGGATCCGATTGGACTGAAGGGGGGATgg > 2:798818/1‑100 (MQ=255)
tgatgaGGGGTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAGGGGCGATATATCACTCAGGATCCGATTGGACTGAAGGGGGGATg > 2:2903789/1‑99 (MQ=255)
tgatgaGGAGTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAGGGGCGATATATCACTCAGGATCCGATTGGACTGAAGGGGGGATgg > 1:2406943/1‑100 (MQ=255)
gatgaGGAGTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAGGGGCGATATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGa > 1:987480/1‑100 (MQ=255)
gatgaGGAGTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAGGGGCGATATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGa > 2:1152561/1‑100 (MQ=25)
tgaGGAGTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAGGGGCGATATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGaa > 1:687969/1‑99 (MQ=255)
gaggagTCCTGCCGGTATTACAACCTCCACCGCTATTATGA‑CCCGCTGCAGGGGCGATATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAAcc < 2:876306/100‑1 (MQ=255)
aggagTCCGGCCGGTATTACAACCGTCACCGCTATTATTT‑TTCGTTTTAGGGGCGATATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAAcc < 1:876320/99‑1 (MQ=14)
aggagTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAGGGGCGATATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAACCt > 2:1950718/1‑100 (MQ=255)
aggagTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAGGGGCGATATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAACCt > 1:2839898/1‑100 (MQ=255)
ggagTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAGGGGCGATATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAACCTg > 1:1169403/1‑100 (MQ=255)
ggagTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAGGGGCGATATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAACCTg > 1:2486970/1‑100 (MQ=255)
ggagTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAGGGGCGATATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAACCTg < 2:2479990/100‑1 (MQ=255)
ggagTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAGGGGCGATATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAACCTg < 1:1222825/100‑1 (MQ=255)
agTCCGGCCGGTATTACAACCGCCACCGCTATTATGACCCCGTTGCAGGGGCAATAATTAACTAAGAACCCGATGGGCTTGAGggggggtggaca > 2:785326/1‑89 (MQ=2)
agTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAGGGGCGATATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAACCTGTa > 1:451216/1‑100 (MQ=255)
agTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAGGGGCGATATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAACCTGTa > 1:1063794/1‑100 (MQ=255)
gTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAGGGGCGATATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAACCTGTAt > 1:1024506/1‑100 (MQ=255)
gTCCGGCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAGGGGCGATATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAACCTGTAt > 2:923660/1‑100 (MQ=255)
ccggccggTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAGGGGCGATATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAACCTGTATgg > 1:2285821/1‑100 (MQ=255)
nggCCGGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAGGGGCGATATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAACCTGTATGGa > 2:2620187/2‑100 (MQ=255)
cGGCCTGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAGGGGCGATATATCACTCAGGATCCGGTTGGACTGAAGGGGGGATGGAACCTGTATGGa < 1:2887248/100‑1 (MQ=255)
|
ATGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGA‑CCCGCTGCAGGGGCGATATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAACCTGTATGGAT > NC_000913/3622700‑3622891
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
