Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A12 F204 I0 R1
|
247 |
174.3 |
8556966 |
94.2% |
8060661 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
1,808,281 |
(A)5→4 |
100% |
coding (486/861 nt) |
yniA → |
fructosamine kinase family protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,808,277 | 0 | A | . | 51.1%
| 244.8
/ inf
| 137 | coding (482/861 nt) | yniA | fructosamine kinase family protein |
| Reads supporting (aligned to +/- strand): ref base A (24/43); new base . (42/28); total (66/71) |
| Fisher's exact test for biased strand distribution p-value = 6.16e-03 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.63e-01 |
Only 100 of 149 total aligned reads displayed.
ACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTT > NC_000913/1808178‑1808376
|
aCGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGa > 1:3702137/1‑100 (MQ=255)
aCGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTCTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGa > 1:3639900/1‑100 (MQ=255)
cgcTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGaaaa < 2:1115883/100‑1 (MQ=255)
gcTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGaaaag < 1:124096/100‑2 (MQ=255)
gcTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGaaaag < 1:1088741/100‑2 (MQ=255)
gcTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGaaaag < 2:1658696/100‑2 (MQ=255)
gcTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGaaaag < 2:2834576/100‑2 (MQ=255)
ctctCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAg > 2:169034/1‑100 (MQ=255)
tctcCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAggg < 1:2184697/100‑1 (MQ=255)
tctcCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAgg < 2:3537921/100‑1 (MQ=255)
ctcCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGaaaaggga > 1:1453711/1‑96 (MQ=255)
ctcCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAggg < 1:2728873/100‑1 (MQ=255)
ccACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGAt > 2:2130927/1‑100 (MQ=255)
ccACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGAt > 2:2335756/1‑100 (MQ=255)
ccACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGAt < 2:76423/100‑1 (MQ=255)
ccACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAG‑AAAAGGGATc < 2:4244351/100‑1 (MQ=255)
ccACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAG‑AAAAGGGATc > 2:1729781/1‑100 (MQ=255)
ccACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAG‑AAAAGGGATc < 2:301895/100‑1 (MQ=255)
cacaACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATc < 2:699690/100‑1 (MQ=255)
caACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCg > 1:744696/1‑99 (MQ=255)
caACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGc < 2:2785442/100‑1 (MQ=255)
cTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCttt > 2:382941/1‑100 (MQ=255)
cTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAG‑AAAAGGGATCGCTTTc < 1:522214/100‑1 (MQ=255)
tCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTc < 1:2822267/100‑1 (MQ=255)
ccACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAG‑AAAAGGGATCGCTTTCgg > 1:273932/1‑100 (MQ=255)
ccACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAG‑AAAAGGGATCGCTTTCgg > 2:1228369/1‑100 (MQ=255)
ccACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAG‑AAAAGGGATCGCTTTCgg > 2:430505/1‑100 (MQ=255)
ccACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAG‑AAAAGGGATCGCTTTCgg < 1:3699207/100‑1 (MQ=255)
cacaGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGTCTGGCAGTTGGAACTGGCTGCAG‑AAAAGGGATCGCTTTCGGc > 1:366437/1‑100 (MQ=255)
cacaGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCgg < 1:4156849/100‑1 (MQ=255)
caGCCCACCACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCggn < 1:2050728/99‑2 (MQ=255)
caGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTTTTCTACGGATTGGCTGGCAGTTGGAACTGGCTGCAG‑AAAAGGGATCGCTTTCGGCaa > 1:663192/1‑100 (MQ=255)
caGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAGAAAGGGATCGCTTTCGGCa > 1:22757/1‑100 (MQ=255)
caGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCa > 2:1845850/1‑100 (MQ=255)
gCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAat < 2:1838050/100‑1 (MQ=255)
cAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAG‑AAAAGGGATCGCTTTCGGCAATATCg < 2:734577/100‑1 (MQ=255)
cAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTAGCAGTTGGAACTGGCTGCAG‑AAAAGGGATCGCTTTCGGCAATATCg < 1:2575155/100‑1 (MQ=255)
acacCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGCTTGGCTGGCAGTTGGAACTGGCTGCAG‑AAAAGGGATCGCTTTCGGCAATATCGAc > 1:1757240/1‑100 (MQ=255)
ccTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGc > 2:1939765/1‑100 (MQ=255)
cTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGcc < 1:4012580/100‑1 (MQ=255)
cTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGcc > 2:2301609/1‑100 (MQ=255)
tGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGcc > 2:2907505/1‑99 (MQ=255)
ggCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAG‑AAAAGGGATCGCTTTCGGCAATATCGACGCCAtc > 2:253767/1‑100 (MQ=255)
aaCGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAG‑AAAAGGGATCGCTTTCGGCAATATCGACGCCAtcgtc < 1:326331/100‑1 (MQ=255)
aCGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAG‑AAAAGGGATCGCTTTCGGCAATATCGACGCCAtcgtcg < 2:1179559/100‑1 (MQ=255)
aCGTCGCTGGTCAACGTTTTGTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAG‑AAAAGGGATCGCTTTCGGCAATATCGACGCCAtcgtcg < 1:798385/100‑1 (MQ=255)
cGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAG‑AAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGa < 1:253766/100‑1 (MQ=255)
cGTCGCTGGTCAACGTTTTTTGCTGAAAAAGGGATTGGCTGGCAGTTTGAACTGGCTGCAG‑AAACGGGCAGGCTTTCAGCAATATCGACGCCATCGTCGa > 1:1915128/1‑100 (MQ=255)
tCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAg < 2:2474082/100‑1 (MQ=255)
tCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAg < 1:529755/100‑1 (MQ=255)
tCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAg < 1:169034/100‑1 (MQ=255)
tCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAG‑AAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGc < 2:803608/100‑1 (MQ=255)
cGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGc < 2:909935/100‑1 (MQ=255)
gCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCa < 1:156182/100‑1 (MQ=255)
cTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAG‑AAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCata > 2:1011225/1‑100 (MQ=255)
tGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAG‑AAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCatat > 1:2125404/1‑100 (MQ=255)
ggTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCatat < 1:2943398/100‑1 (MQ=255)
gTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATAtt > 2:3523839/1‑100 (MQ=255)
cAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAG‑AAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTcag > 2:164986/1‑100 (MQ=255)
cAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAG‑AAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTcag > 2:595727/1‑100 (MQ=255)
aCGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTcagc > 2:3709317/1‑100 (MQ=255)
tttGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTc < 2:3747854/100‑1 (MQ=255)
ttGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAG‑AAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTg < 2:3981420/100‑1 (MQ=255)
tGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAG‑AAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTgg > 1:3012668/1‑100 (MQ=255)
gCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAG‑AAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGc > 2:2309024/1‑100 (MQ=255)
tGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGACAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGcc > 2:816877/1‑100 (MQ=255)
gAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGc < 1:1756106/98‑1 (MQ=255)
gAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCt > 1:4264900/1‑100 (MQ=255)
aacaacGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTc < 1:3823250/100‑1 (MQ=255)
cgatctgATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTca < 2:583027/94‑1 (MQ=255)
acaacGGATTGGCTGGCAGTTGGAACTGGCTGCAG‑AAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTcac > 2:3112520/1‑100 (MQ=255)
acaacGGATTGGCTGGCAGTTGGAACTGGCTGCAG‑AAAAGGGATCGCTTTCGGCAATATCGACGCCATCATCGAGCATATTCAGCAGCGTCTGGCCTcac > 1:798212/1‑100 (MQ=255)
caacGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTcan < 2:4161247/100‑2 (MQ=255)
caacGGATTGGCTGGCAGTTGGAACTGGCTGCAG‑AAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTcaca < 1:1386654/100‑1 (MQ=255)
aacGGATTGGCTGGCAGTTGGAACTGGCTGCAG‑AAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACAt > 2:1306545/1‑100 (MQ=255)
acGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACAt > 1:3556303/1‑100 (MQ=255)
cGGATTGGCTGGCAGTTGGAACTGGCTGCAG‑AAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCa > 2:1942444/1‑100 (MQ=255)
aTTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAAc > 1:162628/1‑100 (MQ=255)
ggctggcAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGc > 1:2216826/1‑100 (MQ=255)
gctggcAGTTGGAACTGGCTGCAG‑AAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAg > 2:2520802/1‑100 (MQ=255)
ctggcAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAg < 1:4057112/100‑1 (MQ=255)
ctggcAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAg < 1:2170357/100‑1 (MQ=255)
tggcAGTTGGAACTGGCTGCAG‑AAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGcc > 2:3731118/1‑100 (MQ=255)
ggcAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGcc < 1:382939/100‑1 (MQ=255)
ggcAGTTGGAACTGGCTGCAG‑AAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCt < 2:1450949/100‑1 (MQ=255)
ggcAGTTGGAACTCGCTGCAG‑AAAAGGGATCGCTTTCGTCAATATCGACGCCATCGTCGAGCCTATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCt > 1:2633728/1‑100 (MQ=255)
cAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCtt > 2:1037600/1‑100 (MQ=255)
gTTGGAACTGGCTGCAG‑AAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTtctc > 2:1099905/1‑100 (MQ=255)
ggAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTg > 1:3577528/1‑100 (MQ=255)
gAACTGGCTGCAG‑AAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGtt > 2:3336997/1‑100 (MQ=255)
aCTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTg < 2:2066248/100‑1 (MQ=255)
aCTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTg < 2:2707994/100‑1 (MQ=255)
aCTGGCTGCAG‑AAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGtt > 1:3220167/1‑98 (MQ=255)
aCTGGCTGCAG‑AAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGc < 2:3387558/100‑1 (MQ=255)
ggCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGTCCTCACATCAACCGCAGCCTTCTCTGTTGCAc < 2:4054906/100‑1 (MQ=255)
ggCTGCAG‑AAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACg > 1:2147278/1‑100 (MQ=255)
cTGCAG‑AAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGc < 1:2309018/100‑1 (MQ=255)
tGCAG‑AAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCg > 2:1090089/1‑100 (MQ=255)
aaaaaGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGAttt > 1:3139283/1‑100 (MQ=255)
aaaaaGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGAtt < 2:3616810/99‑1 (MQ=255)
|
ACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTT > NC_000913/1808178‑1808376
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
