Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A12 F204 I0 R1
|
247 |
174.3 |
8556966 |
94.2% |
8060661 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
1,841,079 |
C→A |
36.2% |
A109S (GCG→TCG) |
ynjF ← |
CDP‑alcohol phosphatidyltransferase family inner membrane protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,841,079 | 0 | C | A | 36.2%
| 172.8
/ 165.3
| 155 | A109S (GCG→TCG) | ynjF | CDP‑alcohol phosphatidyltransferase family inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base C (56/43); new base A (30/26); total (86/69) |
| Fisher's exact test for biased strand distribution p-value = 7.39e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.90e-01 |
Only 100 of 161 total aligned reads displayed.
CGGGGTTATCAATCTGATGTTTTGCTGCCAGTGCAGCAAAGGCGAGAAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGCATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCACCAGCGCGTAAAAGAGAAAATCGAGAGAAATATCAAGAAAGCCGCCCGCGTCGGTAAGCT > NC_000913/1840980‑1841177
|
cGGGGTTATCAATCTGATGTTTTGCTGCCAGTGCAGCAAAGGCGAGAAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAgcgc > 2:2011437/1‑100 (MQ=255)
ggggTTATCAATCTGATGTTTTGCTGCCAGTGCAGCAAAGGCGAGAAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGCa > 2:1277109/1‑100 (MQ=255)
ggTTATCAATCTGATGTTTTGCTGCCAGTGCAGCAAAGGCGAGAAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGCAtt > 2:3438603/1‑100 (MQ=255)
ggTTATCAATCTGATGTTTTGCTGCCAGTGCAGCAAAGGCGAGAAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGAAtt > 1:635501/1‑100 (MQ=255)
gTTATCAATCTGATGTTTTGCTGCCAGTGCAGCAAAGGCGAGAAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGCAttt < 1:303874/100‑1 (MQ=255)
gTTATCAATCTGATGTTTTGCTGCCAGTGCAGCAAAGGCGAGAAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGAAttt < 1:4139855/100‑1 (MQ=255)
ntATCAATCTGATGTTTTGCTGCCAGTGCAGCATAGGCGAGAAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGCAtttt > 1:2819998/2‑100 (MQ=255)
tATCAATCTGATGTTTTGCTGCCAGTGCAGCAAAGGCGAGAAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGAATTTTg > 2:175120/1‑100 (MQ=255)
tATCAATCTGATGTTTTGCTGCCAGTGCAGCAAAGGCGAGAAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGAATTTTg < 2:3347659/100‑1 (MQ=255)
tATCAAGCTGATGTTTTGCTGCCAGTGCAGCAAAGGCGAGAAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGAATTTTg < 2:466097/100‑1 (MQ=255)
aTCAATCTGATGTTTTGCTGCCAGTGCAGCAAAGGCGAGAAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGAATTTTGc > 1:2454387/1‑100 (MQ=255)
aTCAATCTGATGTTTTGCTGCAAGTGCAGCAAAGGCGAGAAAACCGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGCATTTTGc < 1:567425/100‑1 (MQ=255)
tCAATCTGATGTTTTGCTGCCAGTGCAGCAAAGGCGAGAAAACTGCTGCCTGTGCCGATAAACGCAAACAAAAACCAGCCGCCTGCCAGCGCATTTTGCt > 1:2905121/1‑100 (MQ=255)
tCAATCTGATGTTTTGCTGCCAGTGCAGCAAAGGCGAGAAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCACATTTTGCt > 1:2172967/1‑100 (MQ=255)
aaTCTGATGTTTTGCTGCCAGTGCAGCAAAGGCGAGAAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGCATTTTGCTcc > 2:466301/1‑100 (MQ=255)
tCTGATGTTTTGCTGCCAGTGCAGCAAAGGCGAGAAAACTACTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGCATTTTGCTCCgg < 2:1703304/100‑1 (MQ=255)
tCTGATGTTTTGCTCCCAGTGCAGCAAAGGCGAGAAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGCATTTTGCTCCgg < 1:2907796/100‑1 (MQ=255)
cTGATGTTTTGCTGCCAGTGCAGCAAAGGCGAGAAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGCATTTTGCTCCGGt > 1:1995392/1‑100 (MQ=255)
cTGATGTTTTGCTGCCAGTGCAGCAAAGGCGAGAAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGCATTTTGCTCCGGt < 1:4108351/100‑1 (MQ=255)
gATGTTTTGCTGCCAGTGCAGCAAAGGCGAGAAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGAATTTTGCTCCGGTgc < 2:3172627/100‑1 (MQ=255)
aTGTTTTGCTGCCAGTGCAGCAAAGGCGAGAAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGCATTTTGCTCCGGTgca < 1:2215981/100‑1 (MQ=255)
gTTTTGCTGCCAGTGCAGCAAAGGCGAGAAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGCATTTTGCTCCGGTgcagc > 2:193301/1‑100 (MQ=255)
tttGCTGCCAGTGCAGCAAAGGCGAGAAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGCATTTTGCTCCGGTGCAGCaa > 2:1586519/1‑100 (MQ=255)
tttGCTGCCAGTGCAGCAAAGGCGAGAAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGAATTTTGCTCCGGTGCAGCaa > 2:1862317/1‑100 (MQ=255)
ttGCTGCCAGTGCAGCAAAGGCGAGAAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCCGCCGCCTGCCAGCGAATTTTGCTCCGGTGCAGCAAg < 2:3004647/100‑1 (MQ=255)
tgctgcCAGTGCAGCAAAGGCGAGAAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGCATTTTGCTCCGGTGCAGCAAGa > 2:1073776/1‑100 (MQ=255)
gctgcCAGTGCAGCAAAGGCGAGAAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGCATTTTGCTCCGGTGCAGCAAGaa > 2:2382272/1‑100 (MQ=255)
gctgcCAGTGCAGCAAAGGCGAGAAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGCATTTTGCTCCGGTGCAGCAAGaa > 1:1493226/1‑100 (MQ=255)
ctgcCAGTGCAGCAAAGGCGAGAAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGCATTTTGCTCCGGTGCAGCAAGAAt > 1:3917351/1‑100 (MQ=255)
ctgcCAGTGCAGCAAAGGCGAGAAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGAATTTTGCTCCGGTGCAGCAAGAAt < 1:2171368/100‑1 (MQ=255)
ccgcCAGTGCAGCGAAGGCGAGAAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGCATTTTGCTCCGGTGCAGCAAGAAt > 2:2901929/3‑100 (MQ=255)
tgcCAGTGCAGCAAAGGCGAGAAAACTGCTGCCCGTGCCGATACACGCAAAAAACAACCAGCCGCCCGGCAGCGCATTTCGATCCGGTGAAGCAAGa > 1:3972995/1‑97 (MQ=255)
gcCAGTGCAGCAAAGGCGAGAAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGAATTTTGCTCCGGTGCAGCAAGAATaa > 2:204298/1‑100 (MQ=255)
gcCAGTGCAGCAAAGGCGAGAAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGAATTTTGCTCCGGTGCAGCAAGAATaa > 2:3942853/1‑100 (MQ=255)
cactggcagcaAAGGCGAGAAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGCATTTTGCTCCGGTGCAGCAAGAATaaa > 2:4130866/6‑100 (MQ=255)
cAGTGCAGCAAAGGCGAGAAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGCATTTTGCTCCGGTGCAGCAAGAATAAAg < 1:2059088/100‑1 (MQ=255)
cAGTGCAGCAAAGGCGAGAAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGCATTTTGCTCCGGTGCAGCAAGAATAAAg < 1:4260075/100‑1 (MQ=255)
aGTGCAGCAAAGGCGAGAAAACTGCTGCCCGTGCCGATAATCGCAAACAACAACCAGCCGCCGGCCAGCTCATTTTGCGCCGGTGCAGCAAGAATCAAGc < 1:2609791/100‑1 (MQ=255)
aGTGCAGCAAAGGCGAGAAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGAATTTTGCTCCGGTGCAGCAAGAATAAAGc < 2:3089697/100‑1 (MQ=255)
aGTGCAGCAAAGGCGAGAAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGAATTTTGCTCCGGTGCAGCAAGAATAAAGc < 2:3534004/100‑1 (MQ=255)
gTGCAGCAAAGGCGAGAAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGAATTTTGCTCCGGTGCAGCAAGAATAAAGcc < 2:1027122/100‑1 (MQ=255)
cagcaAAGGCGAGAAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGAATTTTGCTCCGGTGCAGCAAGAATAAAGCCaaa > 1:2020454/1‑100 (MQ=255)
gcaAAGGCGAGAAAACTGCTGTCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGCATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACg > 1:484746/1‑100 (MQ=255)
gcaAAGGCGAGAAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGCATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACg > 2:2558072/1‑100 (MQ=255)
caAAGGCGAGAAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGCATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACgg > 2:3958315/1‑100 (MQ=255)
ggCGAGAAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGCATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCAcc < 1:3447604/100‑1 (MQ=255)
gatctgaAAACTGCTGGCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGAATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCAcc < 1:2491171/95‑1 (MQ=255)
gCGAGAAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGCATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCAcc < 1:3889742/99‑1 (MQ=255)
cGAGAAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGAATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCACCAg > 2:3870164/1‑100 (MQ=255)
cGAGAAAACTGCTGCCCGTACCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGCATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCActa > 1:2344080/1‑97 (MQ=255)
gagaAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGCCTTTTGCTCCGCTGCAGCAAGAATAAAGCCAAACGGCACCAgc > 2:4115374/1‑100 (MQ=255)
agaAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGCATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCACCAgcg < 1:3197674/100‑1 (MQ=255)
agaAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGCATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCACCAgcg < 1:3529577/100‑1 (MQ=255)
gaAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGCATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCACCAgcgc > 2:4002949/1‑100 (MQ=255)
gaAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGAATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCACCAgcgc > 2:1101608/1‑100 (MQ=255)
gaAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGAATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCACCAgatc > 2:2491178/1‑97 (MQ=255)
aaCTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGCATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCACCAGcgcg > 2:2155931/1‑98 (MQ=255)
aaCTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGCATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCACCAGCGCGTa > 2:775405/1‑100 (MQ=255)
aaCTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGCATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCACCAGCGCGTa < 1:937759/100‑1 (MQ=255)
ctgctgCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGCATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCACCAGCGCGTaaa > 2:3748302/1‑100 (MQ=255)
ctgctgCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGCATCTTGCACCGGGGCAGCAAGAATAAAGCCAAACGGCACCAGCGCGTaaa > 1:2762137/1‑100 (MQ=255)
gctgcCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGCATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCACCAGCGCGTAAAag < 2:3033658/100‑1 (MQ=255)
tgcCCGTGTCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGCATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCACCAGCGCGTAAAaga < 1:2378059/99‑1 (MQ=255)
tgcCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGAATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCACCAGCGCGTAAAagag < 2:2771745/100‑1 (MQ=255)
ccGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGAATTTTGCTCCGGTGCAGCAAGACTAAAGCCCAATGGCAACAACCCGCAAGAGAGaaa > 1:3719313/1‑100 (MQ=255)
ccGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGAATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCACCAGCGCGTAAAAGAGaaa < 1:277637/100‑1 (MQ=255)
cGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGAATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCACCAGCGCGTAAAAGAGaaaa > 2:2758723/1‑100 (MQ=255)
tGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGCATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCACCAGCGCGTAAAAGAGAAAATc > 1:3856072/1‑100 (MQ=255)
gCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGAATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCACCAGCGCGTAAAAGAGAAAATCg > 2:1264492/1‑100 (MQ=255)
ccGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGAATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCCCCAGCGCGTAAAAGAGAAAATCga > 2:1014634/1‑100 (MQ=255)
cGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGAATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCACCAGCGCGTAAAAGAGAAAATCgag < 2:1672459/100‑1 (MQ=255)
gATAAACGCAAACAACAACCAGCCGCCTGCCAGCGCATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCACCAGCGCGTAAAAGAGAAAATCgaga < 2:3856089/100‑1 (MQ=255)
gATAAACGCAAACAACAACCAGCCGCCTGCCAGCGCATTTTGCACCGGAGCAGCAAGAATAAAGCCAAACGGCACCAGCGCGTAAAAGAGAAAATCgaga < 1:540751/100‑1 (MQ=255)
aaCGCAAACAACAACCAGCCGCCTGCCAGCGCATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCACCAGCGCGTAAAAGAGAAAATCGAGAGaaa > 1:3912248/1‑100 (MQ=255)
aaCGCAAACAACAACCAGCCGCCTGCCAGCGCATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCACCAGCGCGTAAAAGAGAAAAACGAGAGaaa > 1:1660704/1‑100 (MQ=255)
aCGCAAACAACAACCAGCCGCCTGCCAGCGAATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCACCAGCGCGTAAAAGAGAAAATCGAGAGAAat > 1:2076427/1‑100 (MQ=255)
cGCAAACAACAACCAGCCGCCTGCCAGCGCATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCACCAGCGCGTAAAAGAGAAAATCGAGAGAAata < 1:1903924/100‑1 (MQ=255)
cGCAAACAACAACCAGCCGCCTGCCAGCGCATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCACCAGCGCGTAAAAGAGAAAATCGAGAGAAata < 2:319516/100‑1 (MQ=255)
gCACACAACGCCCAGCCGCCTGCCAGGCCATACTGCTCCGGTGCACCAAAAATAAAGCGGAACGGCACTATCGCGCAAAAGAGAAAACCGAGAGaac < 1:3777735/97‑2 (MQ=255)
aacaacaacCAGCCGCCTGCCAGCGCATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCACCAGCGCGTAAAAGAGAAAATCGAGAGAAATATCaa < 2:819006/100‑1 (MQ=255)
aacaacaacCAGCCGCCTGCCAGCGAATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCACCAGCGCGTAAAAGAGAAAATCGAGAGAAATATCaa < 1:1101605/100‑1 (MQ=255)
aacaacaacCAGCCGCCTGCCAGCGAATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCACCAGCGCGTAAAAGAGAAAATCGAGAGAAATATCaa < 2:285134/100‑1 (MQ=255)
acaacaacCAGCCGCCTGCCAGCGCATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCACCAGCGCGTAAAAGAGAAAATCGAGAGAAATATCAAg > 2:2861422/1‑100 (MQ=255)
caacaacCAGCCGCCTGCCAGCGCATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCACCAGCGCGTAAAAGAGAAAATCGAGAGAAATATCAAGa > 1:139031/1‑100 (MQ=255)
acaacCAGCCGCCTGCCAGCGAATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCACCAGCGCGTAAAAGAGAAAATCGAGAGAAATATCAAGaaa > 2:314830/1‑100 (MQ=255)
acaacCAGCCGCCTGCCAGCGAATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCACCAGCGCGTAAAAGAGAAAATCGAGAGAAATATCAAGaaa > 2:312919/1‑100 (MQ=255)
acaacCAGCCGCCTGCCAGCGAATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCACCAGCGCGTAAAAGAGAAAATCGAGAGAAATATCAAGaaa > 2:3480761/1‑100 (MQ=255)
acaacCAGCCGCCTGCCAGCGAATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCACCAGCGCGTAAAAGAGAAAATCGAGAGAAATATCAAGaaa > 2:427320/1‑100 (MQ=255)
aGCCGCCTGCCAGCGCATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCACCAGCGCGTAAAAGAGAAAATCGAGAGAAATATCAAGAAAgccgcc < 2:1503199/100‑1 (MQ=255)
gccTGCCAGCGCATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCACCAGCGCGTAAAAGAGAAAATCGAGAGAAATATCAAGAAAGCCGCCcgcg < 2:1083736/100‑1 (MQ=255)
cTGCCAGCGCATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCACCAGCGCGTAAAAGAGAAAATCGAGAGAAATATCAAGAAAGCCGCCCGCGTc < 2:903768/100‑1 (MQ=255)
tGCCAGCGCATTTTGCTCCGGTGCAGAAAGAATAAAGCCAAACGGCACCAGCGCGTAAAAGAGAAAATCGAGAGAAATATCAAGAAAGCCGCCCGCGTCg > 2:2606710/1‑100 (MQ=255)
tGCCAGCGAATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCACCAGCGCGTAAAAGAGAAAATCGAGAGAAAAATCAAGAAAGCCGCCCGCGTCg > 1:3293742/1‑100 (MQ=255)
ccAGCGCATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCACCAGCGCGTAAAAGAGAAAATCGAGAGAAATATCAAGAAAGCCGCCCGCGTCGGt > 1:1285454/1‑100 (MQ=255)
ccAGCGAATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCACCAGCGCGTAAAAGAGAAAATCGAGAGAAATATCAAGAAAGCCGCCCGCGTCGGt > 1:833519/1‑100 (MQ=255)
cggcgaATTTTGCTCCGGTGCAGCAAGATTAAAGCCAAACGGCACCAGCGCGTAAAAGAGAAAATCGAGAGAAATATCAATAAAGCCGCCCGCCTCg > 1:193711/3‑97 (MQ=255)
aGCGAATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCACCAGCGCGTAAAAGAGAAAATCGAGAGAAATATCAAGAAAGCCGCCCGCGTCGGTa < 2:3618106/99‑1 (MQ=255)
cgcATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCACCAGCGCGTAAAAGAGAAAATCGAGAGAAATATCAAGAAAGCCGCCCGCGTCGGTAAGc < 1:852373/100‑1 (MQ=255)
cgcATTTTGCTCCGGTGCAACAAGAATACAGCCAAACGACACCAGCGCGTAAAAGCGAAAATCGAGAGAAATATCAAGAAAGCCGCCCTCGTCGGTaatg < 1:1848787/100‑3 (MQ=255)
gcATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCACCAGCGCGTAAAAGAGAAAATCGAGAGAAATATCAAGAAAGCCGCCCGCGTCGGTAAGct > 1:345146/1‑100 (MQ=255)
|
CGGGGTTATCAATCTGATGTTTTGCTGCCAGTGCAGCAAAGGCGAGAAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGCGCATTTTGCTCCGGTGCAGCAAGAATAAAGCCAAACGGCACCAGCGCGTAAAAGAGAAAATCGAGAGAAATATCAAGAAAGCCGCCCGCGTCGGTAAGCT > NC_000913/1840980‑1841177
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
