Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F56 I0 R1
|
215 |
141.2 |
6785521 |
95.3% |
6466601 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
1,681,932 |
T→C |
100% |
P33P (CCA→CCG) |
ydgC ← |
GlpM family inner membrane protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,681,932 | 0 | T | C | 98.3%
| 388.3
/ ‑3.3
| 113 | P33P (CCA→CCG) | ydgC | GlpM family inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base T (2/0); new base C (55/56); total (57/56) |
| Fisher's exact test for biased strand distribution p-value = 4.96e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.80e-01 |
Only 100 of 113 total aligned reads displayed.
CGACCACATACTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCC > NC_000913/1681836‑1682027
|
cGACCACATACTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGAAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGa < 1:1448963/100‑1 (MQ=255)
gACCACATACTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGaa < 2:1886214/100‑1 (MQ=255)
ccACATACTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGTGGAATc > 2:3383988/1‑100 (MQ=255)
caTACTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGc > 2:834862/1‑100 (MQ=255)
aCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCg > 2:1470761/1‑100 (MQ=255)
cTAAAAATGATGGTTGCGCGTAAGGCTTCAATTCCGCGTTCGCTGGCAACAATATAATGCGCTATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCg > 1:2278268/1‑99 (MQ=255)
tAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGc < 1:566094/100‑1 (MQ=255)
tAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGc < 2:712573/100‑1 (MQ=255)
aaaaTGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGa > 1:1049767/1‑100 (MQ=255)
aaaaTGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGAAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGa > 2:2809845/1‑100 (MQ=255)
atgatgGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGatat < 1:253753/100‑1 (MQ=255)
atgatgGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGatat < 2:2693184/100‑1 (MQ=255)
tgatgGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGAtata < 2:558719/100‑1 (MQ=255)
tgatgGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGAtata < 1:1896120/100‑1 (MQ=255)
atgGTTGCTCGTAAGGCTTCGAGGCCGCGTTCGCTGGAAACAAGATAATGCGCGAGAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGCTataa < 1:2326243/99‑1 (MQ=255)
tgGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATataata > 1:1216665/1‑100 (MQ=255)
ggTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATAtaataa > 2:1597149/1‑100 (MQ=255)
ggTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATAtaataa > 2:2810315/1‑100 (MQ=255)
ggTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATAtaataa < 2:2716993/100‑1 (MQ=255)
gTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATaataat > 2:1269321/1‑100 (MQ=255)
taagcgTAAGGCTTCAATGCCTCTTTCGCTAGAAACAATATAATGCACGATAAGCGCAAAGTTTGTGAAAAGCGGAATCAGCCCAGCGATATAATAAttt < 1:1099386/97‑1 (MQ=255)
tGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAAttt > 2:1156594/1‑100 (MQ=255)
tGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAAttt > 2:1236307/1‑100 (MQ=255)
tGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAAttt < 2:2484147/100‑1 (MQ=255)
gcgcGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAAttt < 2:2763600/99‑1 (MQ=255)
gcgcGTAAGGCTTCAATGCCGCGTTCGCTGGAAACAATATAAAGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATaataat < 1:224546/97‑1 (MQ=255)
gcgTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTc < 2:302433/100‑1 (MQ=255)
gcgTAAGGCTACAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTc < 1:2226315/100‑1 (MQ=255)
cgTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTcn < 2:1424436/100‑2 (MQ=255)
cgTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCg < 2:1625948/100‑1 (MQ=255)
cgTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCg < 1:2580867/100‑1 (MQ=255)
aaGGCTTCAATGCCGCGTTCGCTGACAACAATACAAAGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGttt < 1:374462/100‑1 (MQ=255)
ggCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGttttt > 2:1272396/1‑100 (MQ=255)
gCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTg < 1:3163730/100‑1 (MQ=255)
gCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTg < 2:2614792/100‑1 (MQ=255)
gCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTg > 2:1658014/1‑100 (MQ=255)
gatctaTGCCGCGTTGGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGc < 2:3333113/95‑1 (MQ=255)
cTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGCAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGc > 2:410551/1‑100 (MQ=255)
cTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTcagatcgga > 1:545279/1‑92 (MQ=255)
cTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGc > 2:2489497/1‑100 (MQ=255)
cTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGc < 2:1542750/100‑1 (MQ=255)
cTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGc < 2:1114443/100‑1 (MQ=255)
cTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGc > 2:129375/1‑100 (MQ=255)
cTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGc < 2:3128816/100‑1 (MQ=255)
tCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTa > 2:2670922/1‑100 (MQ=255)
tCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTa < 2:2479939/100‑1 (MQ=255)
cAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTaa > 2:2853283/1‑100 (MQ=255)
aaTGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTaaa < 1:1241719/100‑1 (MQ=255)
aaTGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTaaa < 1:650937/100‑1 (MQ=255)
aTGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGcagatc > 1:3333085/1‑95 (MQ=255)
aTGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTaaaa < 1:2705179/100‑1 (MQ=255)
aTGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTaaaa > 2:3379545/1‑100 (MQ=255)
aTGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAAACAGCGCGGCGATATAATAATATTTCGTTTTTGATaaaa > 1:1379954/1‑100 (MQ=255)
tGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAac < 1:1101953/100‑1 (MQ=255)
tGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAac < 2:1398736/100‑1 (MQ=255)
tGCCGCGTTCGCGGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAac < 1:427/100‑1 (MQ=255)
gCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAaca > 1:692958/1‑100 (MQ=255)
gCCGCGTTCGATGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAac < 2:813672/99‑1 (MQ=255)
cgcgTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAACACAcc > 1:2972787/1‑100 (MQ=255)
gcgTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCa > 1:545591/1‑100 (MQ=255)
cgTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATACTTTTTCGTTTTTGCTAAAACACCaa < 1:671987/100‑1 (MQ=255)
cgTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCaa < 2:1867681/100‑1 (MQ=255)
ttCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATc > 2:116164/1‑100 (MQ=255)
cGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCa > 1:3146824/1‑99 (MQ=255)
cGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCaa > 2:1296114/1‑100 (MQ=255)
cGCTGGCAACAATATAATGCGCGATAAGAGCAAAGGACGGGAAAACCGGCATCAGCCCGGCGACATCATAATTTTACGTTTTTGCTACAccacca > 1:2950008/1‑95 (MQ=255)
cTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACa > 2:3151981/1‑100 (MQ=255)
caacaaTATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTTTTTTTTTTTTTAACGCCAATAAACAGCa > 1:889845/1‑99 (MQ=255)
caacaaTATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCAc > 2:2489096/1‑100 (MQ=255)
caacaaTATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCAc > 1:2198028/1‑100 (MQ=255)
acaaTATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACAAATCAACAGCACTa > 2:2689025/1‑100 (MQ=255)
caaTATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTAc > 2:1698844/1‑100 (MQ=255)
aaTATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTAcc < 2:732350/100‑1 (MQ=255)
aaTGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAgcgc > 2:2739250/1‑100 (MQ=255)
cgcgATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCg > 2:113253/1‑100 (MQ=255)
cgcgATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCg > 2:3213381/1‑100 (MQ=255)
cgATAAGCGCAAAGGTCGGGAACAGCGGAATCAGCACGGCGGTATAATAATGTATCGTTTTTGCGAAAACACGGATCGACAGCACTACTAGCacaca > 1:819945/1‑96 (MQ=255)
cgATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAg > 2:712579/1‑100 (MQ=255)
gATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAgc < 1:343273/100‑1 (MQ=255)
aTAAGCGCAAAGGTCTGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCa < 1:270010/93‑1 (MQ=255)
gcgcAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGTTAAAACACCAATCAACAGCACTACCAGCCCACCGAGcgcgcc < 2:2293238/100‑3 (MQ=255)
gcgcAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGc > 2:1341407/1‑100 (MQ=255)
gcgcAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGc > 2:1135503/1‑100 (MQ=255)
cgcAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCt > 2:1060739/1‑100 (MQ=255)
cAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCttt > 2:3003157/1‑100 (MQ=255)
aaaGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTg < 1:2608347/100‑1 (MQ=255)
aaGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGa < 2:881583/100‑1 (MQ=255)
aGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGAt < 2:1613438/100‑1 (MQ=255)
ggTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGAtt > 2:3352668/1‑100 (MQ=255)
gTCAGGAAAACCCGAATCAGCCCGGCGCTATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTa < 1:695564/100‑1 (MQ=255)
tCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTTCTTTTTCTTCAATCAACAGCACTACTAACGCACCGCGCCCCGCTTTGATTAc > 1:2087215/1‑100 (MQ=255)
tCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTAc > 2:2401915/1‑100 (MQ=255)
tCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTAc > 1:2087135/1‑100 (MQ=255)
cGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTAcc > 2:450479/1‑100 (MQ=255)
gggAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCa < 2:1756738/100‑1 (MQ=255)
aaaaGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGcc < 1:3180265/100‑1 (MQ=255)
aaaGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGccc < 2:3196817/100‑1 (MQ=255)
aaaGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGccc < 2:2824996/100‑1 (MQ=255)
aaaGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGccc < 1:1401829/100‑1 (MQ=255)
aaGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTTTTTTTTTTTTAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAg > 1:3031286/1‑96 (MQ=255)
|
CGACCACATACTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCC > NC_000913/1681836‑1682027
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
