Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A12 F56 I0 R1
|
312 |
170.3 |
8276235 |
93.7% |
7754832 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
1,681,932 |
T→C |
100% |
P33P (CCA→CCG) |
ydgC ← |
GlpM family inner membrane protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,681,932 | 0 | T | C | 96.0%
| 352.5
/ 0.9
| 111 | P33P (CCA→CCG) | ydgC | GlpM family inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base T (3/2); new base C (45/61); total (48/63) |
| Fisher's exact test for biased strand distribution p-value = 6.50e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 111 total aligned reads displayed.
TCGACCACATACTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCC > NC_000913/1681835‑1682026
|
tCGACCACATACTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCgg < 1:2321964/100‑1 (MQ=255)
naCCACATACTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGaa > 2:1520367/2‑100 (MQ=255)
gACCACATACTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGaa < 1:3652285/100‑1 (MQ=255)
aCCACATACTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAAt > 1:318348/1‑100 (MQ=255)
ccACATACTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCCCGTTCGCTGGCACGAATATAATGCGCGATAAGCGCAAAGGTCGGGCAAAGCGGaa > 2:3227758/1‑98 (MQ=255)
caTACTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGc > 2:1396727/1‑100 (MQ=255)
tACTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGccc < 1:2566615/100‑1 (MQ=255)
aCTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGAAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGccgg > 1:2462422/1‑98 (MQ=255)
cTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGTGGAATCAGCCCgg > 2:3670385/1‑100 (MQ=255)
cTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCACGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCgg > 1:542855/1‑100 (MQ=255)
tAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGc > 1:862351/1‑100 (MQ=255)
tAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGc > 1:2634744/1‑100 (MQ=255)
aaaaaTGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCg > 1:2722393/1‑100 (MQ=255)
aaTGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGata > 1:1717164/1‑100 (MQ=255)
tgatgGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAGGCGGAATCAGCCCGGCGAtata < 2:1657290/100‑1 (MQ=255)
gatgGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGTGGAATCAGCCCGGCGATataa < 1:3136980/100‑1 (MQ=255)
gatgGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATataa < 1:87973/100‑1 (MQ=255)
gatgGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATataa < 2:2268940/100‑1 (MQ=255)
gatgGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATataa > 2:2077161/1‑100 (MQ=255)
atgGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATataat < 1:457447/100‑1 (MQ=255)
atgGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATataat < 2:3752300/100‑1 (MQ=255)
gTTGCGCGTAAGGCTTCAATGCTGCGTTCGCTGGCAATAATATAATGCGCGATAAGCGAAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGAaataataat < 2:2793125/100‑1 (MQ=255)
gTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATaataat > 1:2930914/1‑100 (MQ=255)
cgcgTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAAttttt < 2:602772/100‑1 (MQ=255)
cgcgTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAAGGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAAttttt < 2:3373274/100‑1 (MQ=255)
gcgTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTc < 1:3784621/100‑1 (MQ=255)
cgTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCg < 2:598990/100‑1 (MQ=255)
cgTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCg > 2:3348315/1‑100 (MQ=255)
cgTAAGGATTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCg < 2:4082291/100‑1 (MQ=255)
tAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGtt > 1:2246029/1‑100 (MQ=255)
aaGGCTTCAATGCCGCGTTCGCTTGCAACAATATAATGGGGGATAAGCGCACAGATCGTGACAAGTGGAATGAGCGCGGCGATATAATAATTTTTCGtt < 2:2240657/99‑1 (MQ=255)
ggCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGttttt < 2:1178069/100‑1 (MQ=255)
ggCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGttttt > 2:3405464/1‑100 (MQ=255)
gCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTg > 1:2168428/1‑100 (MQ=255)
cTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTgn < 1:2442790/100‑2 (MQ=255)
cTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGc < 1:2979846/100‑1 (MQ=255)
cTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGc > 2:3537061/1‑100 (MQ=255)
cTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGc < 1:1708105/100‑1 (MQ=255)
cTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGc < 2:2673741/100‑1 (MQ=255)
cTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGc > 2:2444273/1‑100 (MQ=255)
ttCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCt > 2:1998715/1‑100 (MQ=255)
tCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTa < 2:2325739/100‑1 (MQ=255)
tCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTa > 2:1275302/1‑100 (MQ=255)
aaTGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTaaa > 1:2107191/1‑100 (MQ=255)
aTGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTaaaa < 2:160258/100‑1 (MQ=255)
aTGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTaaaa > 2:2108345/1‑100 (MQ=255)
tGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAac < 1:1750086/100‑1 (MQ=255)
tGCCGCGTTCGCTAGCAACAAAAGAATGCGCGATCAGCGCAAAGGTCGGGAAAAGCGGACTCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAac < 2:4102212/100‑1 (MQ=255)
gCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAaca > 2:1418005/1‑100 (MQ=255)
ccGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAacac > 2:1922236/1‑100 (MQ=255)
cgcgTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACAcc < 1:3235322/100‑1 (MQ=255)
cgcgTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACAcc < 2:3971395/100‑1 (MQ=255)
gcgTTGGCAGACAACAATATAATCCTCGATAAGCGAAAACGTCTGAAAAAGCGTAACCAGCCCGTCGATATAATAATTTTTCGTTTTTACTaaa < 2:2087680/94‑1 (MQ=255)
gcgTTCGCGGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCa < 2:2458056/100‑1 (MQ=255)
gCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAAc < 2:1526450/100‑1 (MQ=255)
cTGGCAACAATATAATGCGCGATAAGCGCAAATGTTGGGAAAAGCGGAATCGGTCCGGCGATATAATTATTTTTCGTTTTTTCTAAAACACCAATCAACa < 1:2408934/100‑1 (MQ=255)
cTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACa > 1:1269150/1‑100 (MQ=255)
ggCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGc > 1:1398120/1‑100 (MQ=255)
ggCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGc < 2:1084530/100‑1 (MQ=255)
ggCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGc < 2:3823228/100‑1 (MQ=255)
ggCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGc < 1:1000854/100‑1 (MQ=255)
gCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCa < 2:80771/100‑1 (MQ=255)
caacaaTATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCAc > 2:1354887/1‑100 (MQ=255)
aaTATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTAcc > 2:3230110/1‑100 (MQ=255)
aaTATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTAcc < 2:2772976/100‑1 (MQ=255)
aaTATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTAcc < 1:488893/100‑1 (MQ=255)
aaTAGAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTAcc < 2:1730418/100‑1 (MQ=255)
ataaAATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGAGATAATAATTTTTAGTTTTTGCTAAACCACCAATCAACAGGACTACCa > 2:1008215/1‑100 (MQ=255)
tataATGCGCGAGAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGTGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAg < 2:2436960/100‑1 (MQ=255)
ataATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAgc < 1:3235208/100‑1 (MQ=255)
ataATGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAgc < 2:1297174/100‑1 (MQ=255)
aTGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTTCTTAAACACCAATCAACAGCACTACCAGCGCa > 2:1810017/1‑100 (MQ=255)
tGCGCGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCAc > 1:486246/1‑100 (MQ=255)
gcgcGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCAcc > 1:1891751/1‑100 (MQ=255)
gcgcGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCAcc > 1:2764184/1‑100 (MQ=255)
gcgcGATAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCAcc > 1:2926064/1‑100 (MQ=255)
tAAGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAgcgc < 2:2116757/100‑1 (MQ=255)
aaGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGcgcg < 1:411015/100‑1 (MQ=255)
aaGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCCATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAgcgc < 2:2011512/99‑1 (MQ=255)
aGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGTACTACCAGCGCACCGAGcgcg > 2:2584349/1‑99 (MQ=255)
aGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCgg > 2:2442153/1‑100 (MQ=255)
aGCGCAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCgg < 2:676501/100‑1 (MQ=255)
gcgcAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGc > 1:846744/1‑100 (MQ=255)
cgcAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCt > 1:2871409/1‑100 (MQ=255)
cgaaaaGGGAGGGAAAAGCAGAATCAGCACGGCGATAGAATCATGGTAGGTTTTTGCTAAAACCCCAATCAACAGGACTACCAGCGCACTGGGAGCggg < 2:415983/96‑2 (MQ=255)
cAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCttt > 1:506857/1‑100 (MQ=255)
cAAAGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTGTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCttt < 2:469393/100‑1 (MQ=255)
aaaGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTGTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTg < 1:1208491/100‑1 (MQ=255)
aaGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGa < 1:2558013/100‑1 (MQ=255)
aGGTGGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGAt < 1:993433/100‑1 (MQ=255)
aGGTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGAt < 1:4014399/100‑1 (MQ=255)
ggTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGAtt < 1:694155/100‑1 (MQ=255)
ggTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTACGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGAtt > 2:2259086/1‑100 (MQ=255)
gTCGGGATAATCGGAATCAGCCCGGCGATAGAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTa < 1:2405661/100‑1 (MQ=255)
gTCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTa > 1:1245486/1‑100 (MQ=255)
tCGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTAc > 1:368836/1‑100 (MQ=255)
cGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTAcc < 1:1987021/100‑1 (MQ=255)
cGGGAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTAcc > 2:1987008/1‑100 (MQ=255)
gggAAAAGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCa < 2:2576486/100‑1 (MQ=255)
aaaaGCGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGcc < 1:2442167/100‑1 (MQ=255)
|
TCGACCACATACTAAAAATGATGGTTGCGCGTAAGGCTTCAATGCCGCGTTCGCTGGCAACAATATAATGCGCGATAAGCGCAAAGGTCGGGAAAAGTGGAATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCC > NC_000913/1681835‑1682026
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
