Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A12 F56 I0 R1
|
312 |
170.3 |
8276235 |
93.7% |
7754832 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
1,778,470 |
A→G |
56.5% |
Y278H (TAC→CAC) |
ydiP ← |
putative DNA‑binding transcriptional regulator |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,778,470 | 0 | A | G | 56.5%
| 52.7
/ 108.2
| 100 | Y278H (TAC→CAC) | ydiP | putative DNA‑binding transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (21/22); new base G (27/29); total (49/51) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 102 total aligned reads displayed.
ACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTAATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGTGATCGACATTTTCATAACCCACACGCCAGGAGATCTCTGCCTGTGATAATT > NC_000913/1778371‑1778568
|
aCAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTa > 1:361419/1‑100 (MQ=255)
aCAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTa > 1:339061/1‑100 (MQ=255)
aaCTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTGATc < 1:1716051/100‑1 (MQ=255)
cTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTGATCGc > 1:1957750/1‑100 (MQ=255)
gcgcCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTGATCGCTg < 1:3555098/100‑1 (MQ=255)
cgccgcCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTGATCGCTgg > 1:1937710/1‑100 (MQ=255)
cgccgcCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTAATCGCTgg < 1:3778835/100‑1 (MQ=255)
gccgccAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGTAAAACAGTTTTTAAATTGTCTACGGTGATCGCTggg < 1:2909418/100‑1 (MQ=255)
gccgccAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTAAAATTGTCTACGGTAATCGCTggg > 2:862743/1‑100 (MQ=255)
ccgccAGATTTATGCAACAAGACTTACCGGTCGAGGAAATTCGGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTAATCGCTGGGc > 1:2792511/1‑100 (MQ=255)
ccgccAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTGATCGCTGGGc < 1:3362162/100‑1 (MQ=255)
ccgccAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTAATCGCTGGGc > 2:3629694/1‑100 (MQ=255)
gccAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTAATCGCTGGGCGa < 1:1916252/100‑1 (MQ=255)
ccAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTAATCGCTGGGCGaa > 1:1898211/1‑100 (MQ=255)
cAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTGATCGCTGGGCGaac > 1:1378752/1‑100 (MQ=255)
aTTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTGATCGCTGGGCGaacaac < 1:3607038/100‑1 (MQ=255)
ttATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTAATCGCTGGGCGAACAACCg < 1:1610415/100‑1 (MQ=255)
ccgatctcaaGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTAATCGCTGGGCGAACAACCGa < 2:3210360/93‑1 (MQ=255)
aTCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTGATCGCTGGGCGAACAACCGAc < 1:1038687/100‑1 (MQ=255)
aTCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTGATCGCTGGGCGAACAACCGAc > 1:2333393/1‑100 (MQ=255)
aTCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTAATCGCTGGGCGAACAACCGAc > 2:576211/1‑100 (MQ=255)
aacaaGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTGATCGCTGGGCGAACAACCGACATgg > 2:2592398/1‑100 (MQ=255)
aacaaGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTGATCGCTGGGCGAACAACCGACATgg > 1:2032946/1‑100 (MQ=255)
acgaGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTAATCGCTGGGCGAACAACCGACATGgc < 1:3258682/97‑1 (MQ=255)
acaaGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGATAATCGCTGGGCGAACAACCGACATGgc < 2:4026095/100‑1 (MQ=255)
caaGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTAATCGCTGGGCGAACAACCGaagatcgg > 1:3210380/1‑93 (MQ=255)
aaGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTGATCGCTGGGCGAACAACCGACATGgcgc < 1:1167498/100‑1 (MQ=255)
aaGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTAATCGCTGGGCGAACAACCGACATGgc > 2:1925189/1‑98 (MQ=255)
cTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTAATCGCTGGGCGAACAACCGACATGGCGCaaaa > 2:741132/1‑100 (MQ=255)
ttACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTGATCGCTGGGCGAACAACCGACATGGCGCaaa < 2:110550/98‑1 (MQ=255)
tACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTGATCGCTGGGCGAACAACCGACATGGCGCAAAAAc > 1:4027161/1‑100 (MQ=255)
ccGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTGATCGCTGGGCGAACAACCGACATGGCGCAAAAAc < 2:1563067/98‑1 (MQ=255)
ggctGAGGAAATTCCGATAGGATTTCTTGTTCCGCAAAACAGATTTTAAATTGTCTACGGTCATCGCTGCGCGAACAACCGACATGGCGCAAAAACAGtt > 2:3350694/4‑100 (MQ=255)
ggTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTGATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGtt > 1:2514077/1‑100 (MQ=255)
tGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTGATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTgg < 2:1378743/100‑1 (MQ=255)
tGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTGATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTgg < 1:624005/100‑1 (MQ=255)
aGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTAATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCa > 2:2834605/1‑100 (MQ=255)
ggAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTGATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCaa > 2:1935303/1‑100 (MQ=255)
ggAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTGATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCaa > 1:1025360/1‑100 (MQ=255)
ggAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGATTTTAAATTGTCTACGTTGAACGATGCGCAAACAACAGACATGGCGCAAAAACAGTTTGGCa > 2:2281002/1‑99 (MQ=255)
ggAAATTCAGAGAGGATTTCTTGTTCCGCAAAACAGATCTTAAATTGACTAGGGTGATCGCTGGCCGTACAACAAACATGCCGCAAAAACactgaggca > 2:2274022/1‑91 (MQ=255)
gAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTGATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCaaa > 1:16773/1‑100 (MQ=255)
aaTTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTGATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGt < 2:114940/100‑1 (MQ=255)
aGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTGATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGTGATCg < 1:3402198/100‑1 (MQ=255)
aGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTGATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGTGATCg < 1:2156899/100‑1 (MQ=255)
aTAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTAATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGTGATCGAc > 1:3715744/1‑100 (MQ=255)
aTAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTAATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGTGATCGAc > 2:2618098/1‑100 (MQ=255)
tAGGATTTGTTGTACGGCAAAACAGGTTTTAAATTATCTACGGTAATCGCTGGGCGAACAACCGAAATAACAAAAAAACAGTTTGGCAAAGTGATCGAc < 2:1441190/99‑1 (MQ=255)
tAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTGATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGTGATCGACa > 1:251542/1‑100 (MQ=255)
tAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTAATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGTGATCGACa > 1:1291555/1‑100 (MQ=255)
gATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTGATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGTGATCGACAttt > 2:2119158/1‑100 (MQ=255)
aTTTCTTGTTCCGGAAAACAGTTTTTAAATTGTATACGGTAATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGTGATCGACagt > 2:2555842/1‑96 (MQ=255)
aTTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTGATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGTGATCGACAtttt > 1:1947301/1‑100 (MQ=255)
aTTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTAATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGTGATCGACAtttt < 1:3178776/100‑1 (MQ=255)
tgtCTTGCTACGCAAAACAGATCTTAAATTGCCTACTGTGATCGTTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGTGATCGACATTTTc < 2:2619156/98‑1 (MQ=255)
ttCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTGATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGTGATCGACATTTTCa < 1:2474499/100‑1 (MQ=255)
tCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTGATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGTGATCGACATTTTCa < 2:3010156/99‑1 (MQ=255)
tCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTGATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGTGATCGACATTTTCAt > 1:1995634/1‑100 (MQ=255)
tCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTGATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGTGATCGACATTTTCAt > 1:2427540/1‑100 (MQ=255)
tCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTAATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGTGATCGACATTTTCAt > 2:2912091/1‑100 (MQ=255)
cTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTAATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGTGATCGACATTTTCAt < 2:3255314/99‑1 (MQ=255)
tGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTGATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGTGATCGACATTTTCATAAc > 2:640306/1‑100 (MQ=255)
tGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTGATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGTGATCGACATTTTCATAAc < 2:2083649/100‑1 (MQ=255)
tGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTAATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGTGATCGACATTTTCATAAc > 1:3965030/1‑100 (MQ=255)
tGTACCACAAAACAGTTTATACATTGTCTCCGGTAATCGCTGAGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGTGATCGACATTTTCATaa < 1:608773/99‑1 (MQ=255)
gTTCCGCAAAACAGTTTTTAAATTTTTTATGGTAATCGCTAGGCGAACAACCAACATGGCGCAAAAACAGTTTGGCAAAGTGATCGACATTTTCATAAcc > 2:769642/1‑100 (MQ=255)
gTTCCGCAAAACAGTTTTTAAATTGTCTACGGTGATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGTGATCGACATTTTCATAAcc < 1:2399735/100‑1 (MQ=255)
gTTCCGCAAAACAGTTTTTAAATTGTCTACGGTGATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGTGATCGACATTTTCATAAcc < 2:3894263/100‑1 (MQ=255)
gTTCCGCAAAACAGTTTTTAAATTGTCTACGGTAATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGTGATCGACATTTTCATAAcc > 1:2727978/1‑100 (MQ=255)
gTTCCGCAAAACAGTTTTTAAATTGTCGACGGTAAGCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGTGATCGACATTTTCATa < 2:1359745/97‑1 (MQ=255)
ttCCGCAAAACAGTTTTTAAATTGTCTACGGTAATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGTGATCGACATTTTCATAAccc > 1:336724/1‑100 (MQ=255)
ccGCAAAACAGTTTTTAAATTGTCTACGGTGATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGTGATCGACATTTTCATAACCcac < 1:103423/100‑1 (MQ=255)
cGCAAAACAGTTTTTAAATTGTCTACGGTGATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGTGATCGACATTTTCATAACCcaca > 1:1493186/1‑100 (MQ=255)
cGCAAAACAGTTTTTAAATTGTCTACGGTGATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGTGATCGACATTTTCATAACCcaca < 2:1038353/100‑1 (MQ=255)
aaaCAGTTTTTAAATTGTCTACGGTAATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGTGATCGACATTTTCATAACCCACACGcc < 1:214869/100‑1 (MQ=255)
aCAGTTTTTAAATTGTCTACGGTGATCGCTGGGCGAACAACCGTTGTGGCGCAACAACAGTTTGGCAAAGTGATCGACGTTTTCATAACCCACACGCCAg > 2:578271/1‑100 (MQ=255)
aCAGTTTTTAAATTGTCTACGGTAATCGCTGGGCGAACAACCGACATTGCGCAAAAACAGTTTGGCAAAGTCAGCGACATTTTCATAACACACACGCCAg > 2:2863146/1‑100 (MQ=255)
gTTTTTAAATTGTCTACGGTGATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGTGATCGACATTTTCATAACCCACACGCCAGgag < 1:2155214/100‑1 (MQ=255)
tttttAAATTGTCTACGGTGATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGTGATCGACATTTTCATAACCCACACGCCAGgaga < 1:992868/100‑1 (MQ=255)
tttttAAATTGTCTACGGTAATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGTGATCGACATTTTCATAACCCACACGCCAGgaga > 1:3549661/1‑100 (MQ=255)
ttttAAATTGTCTACGGTGATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGTGATCGACATTTTCATAACCCACACGCCAGGAGAt > 1:1792787/1‑100 (MQ=255)
tAAATTGTCTACGGTGATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGTGATCGACATTTTCATAACCCACACGCCAGGAGAtctc > 1:2834366/1‑100 (MQ=255)
aaaTTGTCTACGGTAATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGTGATCGACATTTTCATAACCCACACGCCAGGAGATctct > 1:2106554/1‑100 (MQ=255)
aaaTTGTCTACGGTAATCGCTGGGCGAACAAAAAAAAAAAAAAAAAAACAGTTTGGCAAAGTGATCGACATTTTCATAACCCACACGCCAGGAGATctct < 2:32728/100‑1 (MQ=255)
aaTTGTCTACGGTGATCGCTGGGCGAACAACCGACATGGCGCAAACACAGTTTGGCACAGTGCTCAACATTTTCATAACCCACACGCCAGGAGAtc > 2:3535356/1‑96 (MQ=255)
aaTTGTCTACGGTAATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGTGATCGACATTTTCATAACCCACACGCCAGGAGATCTCTg < 2:3244027/100‑1 (MQ=255)
aTTGTCTACGGTGATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGTGATCGACATTTTCATAACCCACACGCCAGGAGATCTCTGc < 1:3308069/100‑1 (MQ=255)
aTTGTCTACGGTAATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGTGATCGACATTTTCATAACCCACACGCCAGGAGATCTCTGc < 2:1850155/100‑1 (MQ=255)
ttGTCTACGGTGATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGTGATCGACATTTTCATAACCCACACGCCAGGAGATCTCTGcc < 1:560122/100‑1 (MQ=255)
ttGTCTACGGTGATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGTGATCGACATTTTCATAACCCACACGCCAGGAGATCTCTGcc < 1:1506291/100‑1 (MQ=255)
ttGTCTACGGTGATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTAGCAAAGTGATCGACATTTTCATAACCCACACGCCAGGAGATCTCTGcc < 2:2817925/100‑1 (MQ=255)
gTCTACGGTGATCGCGGGGTGAACAACCGACATGGCGCAAAAACAGCTTGGCAAAGTGATCGACATTTTCATAACCCACATGCCAGGAGATCTCTGCCt > 2:2700150/1‑99 (MQ=255)
gTCTACGGTAATCGCTGGGCGAACAACCGACATGGCGCAAAATCTGTTTGTTAAAGATACCGCGACTATCATAACCCACACGCCAGGAGATCTCTGCCtg < 2:354589/100‑1 (MQ=255)
cTACGGTAATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGTGATCGACATTTTCATAACCCACACGCCAGGAGATCTCTGCCtgtg < 1:3016951/100‑1 (MQ=255)
aCGGTGATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGTGATCGACATTTTCATAACCCACACGCCAGGAGATCTCTGCCTGTGAt > 2:1366397/1‑100 (MQ=255)
aCGGTAATCGCTGGGCTAACAACCTACATGGCCCAAAAACAGTTTGGCAAAGTGATTGACACTTTCATAACCCACACGCCAGGAGATCTCTGCCTGTGAt < 2:4058208/100‑1 (MQ=255)
aCGGTAATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGTGATCGACATTTTCATAACCCACACGCCAGGAGATCTCTGCCTGTGAt < 1:974815/100‑1 (MQ=255)
cGGTGATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGTGATCGACATTTTCATAACCCACACGCCAGGAGATCTCTGCCTGTGATa > 2:539168/1‑100 (MQ=255)
cGGTAAGCGCTTGGCGAACGACCGACATGGCGCAACAACAGTTTGGCAAAGTGATCGTCATTGTCATAACCCACTCGCCAGGAGATCTTTGCCTGTGAt < 2:1955893/99‑1 (MQ=255)
tAATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGTGATCGACATTTTCATAACCCACACGCCAGGAGATCTCTGCCTGTGATAAtt < 2:339058/100‑1 (MQ=255)
|
ACAAACTGCGCCGCCAGATTTATCCAACAAGACTTACCGGTTGAGGAAATTCAGATAGGATTTCTTGTTCCGCAAAACAGTTTTTAAATTGTCTACGGTAATCGCTGGGCGAACAACCGACATGGCGCAAAAACAGTTTGGCAAAGTGATCGACATTTTCATAACCCACACGCCAGGAGATCTCTGCCTGTGATAATT > NC_000913/1778371‑1778568
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
