Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A12 F56 I0 R1
|
312 |
170.3 |
8276235 |
93.7% |
7754832 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,638,525 |
A→G |
47.2% |
E295G (GAA→GGA) |
pitA → |
phosphate transporter, low‑affinity; tellurite importer |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,638,525 | 0 | A | G | 47.2%
| 20.4
/ inf
| 247 | E295G (GAA→GGA) | pitA | phosphate transporter, low‑affinity; tellurite importer |
| Reads supporting (aligned to +/- strand): ref base A (73/56); new base G (60/55); total (134/113) |
| Fisher's exact test for biased strand distribution p-value = 5.21e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.08e-01 |
Only 100 of 250 total aligned reads displayed.
TACCCGTGATGCCATCAACAACGTCGAAGCTTACTTTGAGCAGCATCCTGCGCTGCTCAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGAAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAACGCGCTCAACCGCCTGAAAGGTATGTTGACCACCGATGTGGAAAG > NC_000913/3638427‑3638624
|
tacccgtGATGCCATCAACAACGTCCAAGCTTACTTTGAGCCGCATCCTGCGCTGCTCAAACAGGCTACCGGTGCGGATCAGTTAGTACCGGCTCCGGaa > 2:530975/1‑100 (MQ=255)
cccgtGATGCCATCAACAACGTCGAAGCTTACTTTGAGCAGCATCCTGCGCTGCTCAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGGAGc < 1:3329116/100‑1 (MQ=255)
cccgtGATGCCATCAACAACGTCGAAGCTTACTTTGAGCAGCATCCTGCGCTGCTCAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGAAGc < 2:404296/100‑1 (MQ=255)
ccgtGATGCCATCAACAACGTCGAAGCTTACTTTGAGCAGCATCCTGCGCTGCTCAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGAAGCt < 2:3285268/100‑1 (MQ=255)
tGATGCCATCAACAACGTCGAAGCTTACTTTGAGCAGCATCCTGCGCTGCTCAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGAAGCTGgc < 1:2390759/100‑1 (MQ=255)
gATGCCATCAACAACGTCGAAGCTTACTTTGAGCAGCATCCTGCGCTGCTCAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGGAGCTGgcg < 1:1520341/100‑1 (MQ=255)
ccATCAACAACGTCGAAGCTTACTTTGAGCAGCATCCTGCGCTGCTCAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGGAGCTGGcgcaac > 1:187816/1‑100 (MQ=255)
cATCAACAACGTCGAAGCTTACTTTGCGCAGCATCCTGCGCTGCTCAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGAAGCTGGcgcaacg < 1:859028/100‑1 (MQ=255)
cATCAACAACGTCGAAGCTTACTTTGAGCAGCATCCTGCGCTGCTCAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGGAGCTGGcgcaacg > 1:2641289/1‑100 (MQ=255)
cATCAACAACGTCGAAGCTTACTTTGAGCAGCATCCTGCGCTGCTCAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGAAGCTGGcgcaacg > 2:3509920/1‑100 (MQ=255)
caacaaCGTCGAAGCTTACTTTGAGCAGCATCCTGCGCTGCTCAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGGAGCTGGcgcaacgcta > 2:2508624/1‑98 (MQ=255)
aacaacGTCGAAGCTTACTTTGAGCAGCATCCTGCGCTGCTCAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGGAGCTGGCgcaacgcaac < 2:1961743/100‑1 (MQ=255)
acaacGTCGAAGCTTACTTTGAGCAGCATCCTGCGCTGCTCAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGAAGCTGGCgcaacgcaac > 2:837821/1‑99 (MQ=255)
caacGTCGAAGCTTACTTTGAGCAGCATCCTGCGCTGCTCAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGGAGCTGGCGCAACGCAACCt < 2:1853679/100‑1 (MQ=255)
caacGTCGAAGCTTACTTTGAGCAGCATCCTGCGCTGCTCAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGAAGCTGGCGCAACGCAACCt > 1:2295171/1‑100 (MQ=255)
acGTCGAAGCTTACTTTGAGCAGCATCCTGCGCTGCTCAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGAAGCTGGCGCAACGCAACCTGc < 2:334903/100‑1 (MQ=255)
cGTCGAAGCTTACTTTGAGCAGCATCCTGCGCTGCTCAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGGAGCTGGCGCAACGCAACCTGCg < 1:3031235/100‑1 (MQ=255)
gTCGAAGCTTACTTTGAGCAGCATCCTGCGCTGCTCAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGAAGCTGGCGCAACGCAACCTGCgg < 1:2275209/100‑1 (MQ=255)
tCGAAGCTTACTTTGAGCAGCATCCTGCGCTGCTCAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGGAGCTGGCGCAACGCAACCTGCGGa > 1:3191501/1‑100 (MQ=255)
tCGAAGCTTACTTTGAGCAGCATCCTGCGCTGCTCAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGAAGCTGGCGCAACGCAAACTGCGGa > 1:2092692/1‑100 (MQ=255)
aGCTTACTTTGAGCAGCATCCTGCGCTGCTCAAACAGGCGACCGGTGCTGATCAGTTAGTACCGGCTCCGGGAGCTGGCGCAACGCAACCTGCGGAGTTc < 2:612506/100‑1 (MQ=255)
tACTTTGAGCAGCATCCTGCGCTGCTCAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGGAGCTGGCGCAACGCAACCTGCGGAGTTCCACt < 1:3826196/100‑1 (MQ=255)
tACTTTGAGCAGCATCCTGCGCTGCTCAAACAGGCTACCGGTGCTGACCAGTTAGTACCGGCTCCGGGAGCTGGCGCAACGCAACCTGCGGAGTTCCAc > 2:1016786/1‑99 (MQ=255)
aCTTTGAGCTGCATCCAGCGCTGGACGATCAGGCTACCGGTGCTGTGCAGTAAGTACCGCCGACGGACGCTGGCGCAACGGAACGTTCGGAGcaccac > 2:301226/1‑98 (MQ=255)
aCTTTGAGCAGCATCCTGCGCTGCTCAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGGAGCTGGCGCAACGCAACCTGCGGAGTTCCACTg < 2:1870775/100‑1 (MQ=255)
cTTTGAGCAGCATCCTGCGCTGCTCAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGAAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGc < 1:1044238/100‑1 (MQ=255)
cTTTGAGCAGCATCCTGCGCTGCTCAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGAAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGc < 1:3233912/100‑1 (MQ=255)
cTTTGAGCAGCATCCTGCGCTGCTCAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGAAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGc < 1:1080549/100‑1 (MQ=255)
tttGCGCAGCATCCTGCGCTGCTCAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGAAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGc < 2:2461759/99‑1 (MQ=255)
tttGAGCAGCATCCTGCGCTGCTCAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGAAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGcc < 2:873823/100‑1 (MQ=255)
ttGAGCAGCATCCTGCGCTGCTCAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGAAGCGGGCGCAACGCAACCTGCGGAGTTCCACTGCCa < 2:1934390/100‑1 (MQ=255)
gcagcaTCCTGCGCTGCTCAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGGAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCg > 2:2840112/1‑100 (MQ=255)
gcagcaTCCTGCGCTGCTCAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGAAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCg > 2:1724658/1‑100 (MQ=255)
cagcaTCCTGCGCTGCTCAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGGAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGt < 1:2610808/100‑1 (MQ=255)
agcaTCCTGCGCTGCTCAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGAAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTc > 1:2061714/1‑100 (MQ=255)
gcaTCCTGCGCTGCTCAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGAAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCg > 2:34489/1‑100 (MQ=255)
ccTGCGCTGCTCAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGAAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATa < 2:1433718/100‑1 (MQ=255)
cTGCGCTGCTCAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGAAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATAc < 1:2638756/100‑1 (MQ=255)
cTGCGCTGCTCAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGAAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATAc > 2:2976786/1‑100 (MQ=255)
gcgcTGCTCAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGGAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCa < 2:3876129/100‑1 (MQ=255)
gctgctCAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGGAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCAtt > 2:3111890/1‑100 (MQ=255)
gctgctCAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGGAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCAt < 2:1229707/99‑1 (MQ=255)
gctgctCAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGAAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCAtt > 1:2452194/1‑100 (MQ=255)
gctCAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGGAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAAc > 1:1970083/1‑100 (MQ=255)
ctCAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGGAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAAcg > 2:1524382/1‑100 (MQ=255)
ctCAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGAAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAAcg < 1:1666236/100‑1 (MQ=255)
ctCAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCACCGGAAGCTGGCGCAACGCTACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAAcg < 2:2257864/100‑1 (MQ=255)
cAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGGAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAAcgcg > 2:1667737/1‑100 (MQ=255)
cAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGAAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAAcgcg > 1:687507/1‑100 (MQ=255)
tctcAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGGAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAACgcgc < 2:3062248/97‑1 (MQ=255)
aaCAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGAAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAACGCGCt > 1:1199860/1‑100 (MQ=255)
cAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGGAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAACgcgcaga > 1:3060990/1‑97 (MQ=255)
ctcttccgatcTGATCAGTTAGTACCGGCTCCGGAAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAACGCGCTCAAcc < 2:260205/90‑1 (MQ=255)
cTACCGGTGCTGATCAGTTAGTACCGGCTCCGGAAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAACGCGCTCAACCg < 1:2974091/100‑1 (MQ=255)
tACCGGTGCTGATCAGTTAGTACCGGCTCCGGGAGCTGGAGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAACGCGCTCAACCg < 2:1148171/99‑1 (MQ=255)
tACCGGTGCTGATCAGTTAGTACCGGCTCCGGAAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAACGCGCTCAACCGc > 1:3672226/1‑100 (MQ=255)
aCCGGTGCTGATCAGTTAGTACCGGCTCCGGGAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAACGCGCTCAACCGcc < 1:4087328/100‑1 (MQ=255)
aCCGGTGCTAATCAGTTAGTACCGGCTCCGGAAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGACATCCGTCGAATACCATTAACGCGCTCAACCGcc < 2:4113928/100‑1 (MQ=255)
ccGGTGCTGATCAGTTAGTACCGGCTCCGGGAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAACGCGCTCAACCGCCt < 1:2880529/100‑1 (MQ=255)
ccGGTGCTGATCAGTTAGTACCGGCTCCGGAAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAACGCGCTCAACCGCCt < 2:445021/100‑1 (MQ=255)
ccGGTGCGGATCAGTTAGTACCGGCTCCGGGAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAACGCGCTCAACCGcc < 1:2770774/99‑1 (MQ=255)
ggcgCTGATCAGTTAGTACCGGCTCCGGGAGCTGGCGCAACGCAACCTGCGGAGTTCCACCGCCAGCCGTCGACTACCACTAACGCCCCCAACCGCCTGa > 2:3924677/4‑100 (MQ=255)
tGCTGATCAGTTAGTACCGGCTCCGGGAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAACGCGCTCAACCGCCTGaaa > 1:113544/1‑100 (MQ=255)
gCTGATCAGTTAGTACCGGCTCCGGGAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAACGCGCTCAACCGCCTGAAAg > 1:896728/1‑100 (MQ=255)
cTGATCAGTTAGTACCGGCTCCGGGAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAACGCGCTCAACCGCCTGAAAgg < 2:2312755/100‑1 (MQ=255)
cTGATCAGTTAGTACCGGCTCCGGAAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAACGCGCTCAACCGCCTGAAAgg < 1:3419550/100‑1 (MQ=255)
gATCAGTTAGTACCGGCTCCGGGAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAACGCGCTCAACCGCCTGAAAGGTa > 1:972732/1‑100 (MQ=255)
gATCAGTTAGTACCGGCTCCGGGAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAACGCGCTCAACCGCCTGAAAGGTa < 1:3488516/100‑1 (MQ=255)
gATCAGTTAGTACCGGCTCCGGGAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAACGCGCTCAACCGCCTGAAAGGTa > 1:76397/1‑100 (MQ=255)
gATCAGTTAGTACCGGCTCCGGAAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAACGCGCTCAACCGCCTGAAAGGTa < 1:4064019/100‑1 (MQ=255)
gATCAGTTAGTACCGGCTCCGGAAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAACGCGCTCAACCGCCTGAAAGGTa > 1:1440369/1‑100 (MQ=255)
aTCAGTTAGTACCGGCTCCGGGAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAACGCGCTCAACCGCCTGAAAGGTAt > 1:2223442/1‑100 (MQ=255)
tCAGTTAGTACCGGCTCCGGAAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAACGCGCTCAACCGCCTGAAAGGTATg < 1:1568872/100‑1 (MQ=255)
cAGTTAGTACCGGCTCCGGGAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAACGCGCTCAACCGCCTGAAAGGTATGt < 1:612554/100‑1 (MQ=255)
cAGTTAGTACCGGCTCCGGAAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAACGCGCTCAACCGCCTGAAAGGTATGt < 1:1301508/100‑1 (MQ=255)
gTTAGTACCGGCTCCGGAAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATCCCATTAAGACGCTCAACCGCCCGACAGGTATGt > 2:3751894/1‑98 (MQ=255)
gTTAGTACCGGCTCCGGAAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAACGCGCTCAACCGCCTGAAAGGTATGTTg > 1:3959614/1‑100 (MQ=255)
ttAGTACCGGCTCCGGGAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAACGCGCTCAACCGCCTGAAAGGTATGTTGa < 2:567862/100‑1 (MQ=255)
ttAGTACCGGCTCCGGGAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAACGCGCTCAACCGCCTGAAAGGTATGTTGa < 2:3786488/100‑1 (MQ=255)
ttAGTACCGGCTCCGGAAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAACGCGCTCAACCGCCTGAAAGGTATGTTGa > 1:1241714/1‑100 (MQ=255)
tAGTACTGGATCCGGAAGCGGGCGCGACGGTAACTGCGGAGTTCCACTAGCATTCGTCGAATGCCTTGAACGCGTTTAATCGACTGGTAGGGATGTTg < 2:2699726/98‑1 (MQ=255)
aGTACCGGCTCCGGAAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAACGCGCTCAACCGCCTGAAAGGTATGTTGacc < 2:3584422/100‑1 (MQ=255)
gTACCGGCTCCGGGAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAACGCGCTCAACCGCCTGAAAGGTATGTTGacca < 2:3566688/100‑1 (MQ=255)
tACCGGCTCCGGGAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAACGCGCTCAACCGCCTGAAAGGTATGTTGaccac > 1:486235/1‑100 (MQ=255)
aCCGGCTCCGGGAGCTGGCGCAACGGAACCTGCGGAGCTCCACTGCCATCCGTCGAATACCATTAACGCGCTCAACCGCCTGCAAGGTATGTTGaccac > 1:191001/1‑99 (MQ=255)
aCCGGCTCCGGAAGCTGGCGCAACGCAACCTGCGGCGTTCCACTGCCATCCGTCGAATACCATTAACGCGCTCAACCGCCTGAAAGGTATGTTGaccacc > 2:2882775/1‑100 (MQ=255)
aCCGGCTCCGGAAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAACGCGCTCAACCGCCTGAAAGGTATGTTGaccacc < 1:3133224/100‑1 (MQ=255)
aCCGGCTCCGGAAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAACGCGCTCAACCGCCTGAAAGGTATGTTGaccacc > 2:2061629/1‑100 (MQ=255)
ccGGCTCCGGGAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAACGCGCTCAACCGCCTGAAAGGTATGTTGACCACCg > 1:1751545/1‑100 (MQ=255)
ccGGCTCCGGAAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAACGCGCTCAACCGCCTGAAAGGTATGTTGACCACCg > 1:3752295/1‑100 (MQ=255)
gCTCCGGGAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAACGCGCTCAACCGCCTGAAAGGTATGTTGACCACCGAtg > 1:220613/1‑100 (MQ=255)
cTCCGGGAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAACGCGCCCAACCGCCTGAAAGGTATGTTGACCACCGAtg > 2:2198536/1‑99 (MQ=255)
cTCCGGAAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAACGCGCTCAACCGCCTGAAAGGTATGTTGACCACCGAtgt > 2:3956474/1‑100 (MQ=255)
cGGGAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAACGCGCTCAACCGCCTGAAAGGTATGTTGACCACCGATGTGGa > 1:1605436/1‑100 (MQ=255)
cGGGAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAACGCGCTCAACCGCCTGAAAGGTATGTTGACCACCGATGTGGa < 1:3944784/100‑1 (MQ=255)
ggAAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAACGCGCTCAACCGCCTGAAAGGTATGTTGACCACCGATGTGGaa < 1:2576362/100‑1 (MQ=255)
ggAAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAACGCGCTCAACCGCCTGAAAGGTATGTTGACCACCGATGTGGaa < 1:3858275/100‑1 (MQ=255)
ggAAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGACATCCGTCGAATACCATTAACGCGCTCAACCGCCTGAAAGGTATGTTGACCACCGATGTGGaa > 1:2912821/1‑100 (MQ=255)
gAAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAACGCGCTCAACCGCCTGAAAGGTATGTTGACCACCGATGTGGaaa > 1:208441/1‑100 (MQ=255)
gAAGCTGGCGCAACGCAACCTGCGGAGTGCCACTGCCATCCGTCGAATACCATTAACGCGCTCAACCGCCGGAAAGGTATGTTGACCACCGATGTGGaaa < 2:3851557/100‑1 (MQ=255)
|
TACCCGTGATGCCATCAACAACGTCGAAGCTTACTTTGAGCAGCATCCTGCGCTGCTCAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGAAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAACGCGCTCAACCGCCTGAAAGGTATGTTGACCACCGATGTGGAAAG > NC_000913/3638427‑3638624
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
