Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A12 F56 I0 R1
|
312 |
170.3 |
8276235 |
93.7% |
7754832 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,616,491 |
T→C |
48.1% |
D192G (GAT→GGT) |
yjjI ← |
DUF3029 family protein, putative glycine radical enzyme |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,616,491 | 0 | T | C | 48.1%
| ‑5.4
/ 269.0
| 194 | D192G (GAT→GGT) | yjjI | DUF3029 family protein, putative glycine radical enzyme |
| Reads supporting (aligned to +/- strand): ref base T (51/50); new base C (38/55); total (89/105) |
| Fisher's exact test for biased strand distribution p-value = 1.96e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.38e-01 |
Only 100 of 194 total aligned reads displayed.
TTTTATCATGCACCGGACCGTTGGCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACTCTGCATCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACGGGCCGATATTGGCG > NC_000913/4616393‑4616589
|
tttATCATGCACCGGACCGTTGGCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCg < 2:3205491/100‑1 (MQ=255)
tttATCATGCACCGGACCGTTGGCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCg < 1:1722069/100‑1 (MQ=255)
ttATCATGCACCGGACCGTTGGCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGt > 2:580796/1‑100 (MQ=255)
tATCATGCACCGGACCGTTGGCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGACCGTa < 2:730954/100‑1 (MQ=255)
aTCATGCACGGGGCCGTTGGCGAGGTGCGGTTTGCTACATTCTCAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGACCGTAg < 2:1140165/100‑1 (MQ=255)
aTCATGCACCGGACCGTTGGCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAg < 1:3443365/100‑1 (MQ=255)
aTCATGCACCGGACCGTTGGCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGACCGTAg < 1:156201/100‑1 (MQ=255)
cATGCACCGGACCGTTGGCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGACCGTAGAt > 1:2001056/1‑100 (MQ=255)
aTGCACCGGACCGTTGGCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGACCGTAGATa > 1:3200523/1‑100 (MQ=255)
aTGCACCGGACCGTTGGCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGACCGTAGATa < 1:1147352/100‑1 (MQ=255)
aTGCACCGGAACGTTGGCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGa > 2:3445872/1‑98 (MQ=255)
tGCACCGGACCGTTGGCGATGTGCGGTTTGCTACATTTACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGACCGTAGATaa < 2:2781788/100‑1 (MQ=255)
aCCGGACTGTTGGCGATGTGCGGTTTGCTACATCCACAGAGGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCATGATCGTAGATAAAgg < 2:1369469/100‑1 (MQ=255)
aCCGGACCGTTGGCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAgg < 1:3480852/100‑1 (MQ=255)
aCCGGACCGTTGGCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAgg < 1:2132677/100‑1 (MQ=255)
aCCGGACCGTTGGCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAg > 2:3003288/1‑99 (MQ=255)
gACCGTTGGCGATGTGCGGTTTGCTACATTCACAGATGCTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGACCGTAGATAAAGGTCAg < 2:457210/100‑1 (MQ=255)
aCCGTTGGCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGACCGTAGATAAAGGTCAgg > 1:441643/1‑100 (MQ=255)
tGGCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCgg < 1:3053506/100‑1 (MQ=255)
tGGCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGACCGTAGATAAAGGTCAGGTTCgg < 1:1792936/100‑1 (MQ=255)
tGGCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGACCGTAGATAAAGGTCAGGTTCgg < 2:869735/100‑1 (MQ=255)
ggCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGt < 2:350795/100‑1 (MQ=255)
ggCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGACCGTAGATAAAGGTCAGGTTCGGt < 1:528875/100‑1 (MQ=255)
ggCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGACCGTAGATAAAGGTCAGGTTCGGt > 2:1471763/1‑100 (MQ=255)
gCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGTg < 1:1035725/100‑1 (MQ=255)
gtgCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGTGAAAcc < 2:3786362/100‑1 (MQ=255)
gtgCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGTGAAAcc < 1:2696918/100‑1 (MQ=255)
cGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGACCGTAGATAAAGGTCAGGTTCGGTGAAACCTGc < 1:1433195/100‑1 (MQ=255)
tttGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGACCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTc < 1:134526/100‑1 (MQ=255)
gCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGACCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAAc < 1:1583469/100‑1 (MQ=255)
gCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGACCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAAc > 2:485198/1‑100 (MQ=255)
tACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGTTCATCAGGGGTTATTTCAGGATCGTAGATAAAGGACAGGTTCGGTGTACCCTGCTTCAActc > 2:1974180/1‑100 (MQ=255)
tACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCGGGGGTGATTTCAGGATCGGAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAAct < 2:3409402/99‑1 (MQ=255)
tACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAActc > 2:3998757/1‑100 (MQ=255)
tACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGACCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCACctc > 2:3776910/1‑100 (MQ=255)
aCATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGACCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAActct > 2:3167566/1‑100 (MQ=255)
cATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACtctg < 1:4015437/100‑1 (MQ=255)
aTTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACtctgc < 1:2582485/100‑1 (MQ=255)
aTTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGACCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACtctgc < 2:3081061/100‑1 (MQ=255)
ttCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACtctgca < 1:1055284/100‑1 (MQ=255)
ttCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACtctgca > 1:1404536/1‑100 (MQ=255)
ttCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGACCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACtctgca < 1:37333/100‑1 (MQ=255)
tCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACtctgcat > 1:3782111/1‑100 (MQ=255)
cacaGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGACCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACtctgcatc < 2:3819846/100‑1 (MQ=255)
acaGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGACCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACtctgcatct < 2:3929943/100‑1 (MQ=255)
caGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGACCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACtctgcatctg < 2:3630346/100‑1 (MQ=255)
caGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGACCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACtctgcatctg < 2:2914849/100‑1 (MQ=255)
caGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGACCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACtctgcatctg < 2:3481908/100‑1 (MQ=255)
aGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGACCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACtctgcatctgc < 1:3764873/100‑1 (MQ=255)
gATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACtctgcatctgca < 1:2879270/100‑1 (MQ=255)
gATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGACCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACtctgcatctgca < 1:1500814/100‑1 (MQ=255)
gATGTTCTTCGCCACTGCCAGGAGCAGGTGATCAGGGGTGATTTGAGGACCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACtctgcatctgca < 2:2001043/100‑1 (MQ=255)
aTGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACTCTGCATCTGCAc < 2:4137/100‑1 (MQ=255)
tGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACTCTGCATCTGCACg > 1:1920376/1‑100 (MQ=255)
gTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGACCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACTCTGCATCTGCACGt > 1:2386932/1‑100 (MQ=255)
gTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGACCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACTCTGCATCTGCACGt > 1:1836005/1‑100 (MQ=255)
cttcGCCACTTCCAGCAGTAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACTCTGCATCTGCAGGTAAg > 2:676231/1‑100 (MQ=255)
cttcGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACTCTGCATCTGCACGTAAg > 2:2609931/1‑100 (MQ=255)
cttcGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGACCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACTCTGCATCTGCACGTAAg < 1:905677/100‑1 (MQ=255)
tggCCCCTTCCAGCCGCAGGTCATCGGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTCCGGCGAAACCTGCTTCATCtctgcacctgca < 2:405079/90‑1 (MQ=255)
cGCCACTTCCAGCAGTAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACTCTGCATCTGCACGTAAGATc < 1:4063859/100‑1 (MQ=255)
cGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACTCTGCATCTGCACGTAAGATc > 1:66262/1‑100 (MQ=255)
gCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGACCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACTCTGCATCTGCACGTAAGATcg > 1:489033/1‑100 (MQ=255)
cTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACTCTGCATCTGCACGTAAGATcgcgcg < 1:299773/100‑1 (MQ=255)
tCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACTCTGCATCTGCACGTAAGATCGCGCggg < 2:2468971/100‑1 (MQ=255)
tCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACTCTGCATCTGCACGTAAGATCGCGCggg < 2:2068197/100‑1 (MQ=255)
tCCAGCAGCAGGTCATCAGGGGTGATTTCAGGACCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACTCTGCATCTGCACGTAAGATCGCGCggg < 1:624447/100‑1 (MQ=255)
tCCAGCAGCAGGTCATCAGGGGTGATTTCAGGACCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACTCTGCATCTGCACGTAAGATCGCGCggg < 1:1652416/100‑1 (MQ=255)
ccAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACTCTGCATCTGCACGTAAGATCGCGCGGGt > 1:2810983/1‑100 (MQ=255)
cagcagcagGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACTCTGCATCTGCACGTAAGATCGCGCGGGTa < 1:986948/100‑1 (MQ=255)
gcagcagGTCATCAGGGGTGATTTCAGGACCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACTCTGCATCTGCACGTAAGATCGCGCGGGTAAt < 1:2517177/100‑1 (MQ=255)
gcagcagGTCATCAGGGGTGATATCAGGATCGTAGATAAAGATCAGGCTCGGTGAAACCTGGTTCAACTCTGCATCTGCACGTAAGATCGCGCGGGTAAt > 2:2254050/1‑100 (MQ=255)
cagcagGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACTCTGCATCTGCACGTAAGATCGCGCGGGTAATg > 2:402181/1‑100 (MQ=255)
agcagGTCATCAGGGGTGATTTCAGGACCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACTCTGCATCTGCACGTAAGATCGCGCGGGTAATgg < 2:1841025/100‑1 (MQ=255)
agcagGTCATCAGGGGTGATTTCAGGACCGTAGATAAAGGTAAGGTTCGGTGAAACCTGCTTCTACTCTTTATCTGCACGTAAGATCGCGCGGGTAATgg < 2:143692/100‑1 (MQ=255)
gcagGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACTCTGCATCTGCACGTAAGATCGCGCGGGTAATggg < 2:3370103/100‑1 (MQ=255)
cagGTCATCAGGGGTGATGTCATGACCCTAGCTGCAGGTCAGGCTCGGTGGAACCTGCTTAAACTTTGCATCTGCACGTAAGATCGCGCGGGt < 2:2852124/93‑1 (MQ=255)
agGTCATCAGGGGTGATTTCAGGACCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACTCTGCATCTGCACGTAAGATCGCGCGGGTAATGGGCg < 2:3639328/100‑1 (MQ=255)
ggTCCTCAGGGGTGATTTCAGGACCGTAGCTAAAGGTCAGGTTCGGTGCCCCCTGCTTCAACTCTGCATCTGCACGTCACATCGCGCGGGTAATGCGCGa > 2:2455650/1‑100 (MQ=255)
ggTCATCAGGGGTGATTTCAGGACCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACTCTGCATCTGCACGTAAGATCGCGCGGGTAATGGGCGa > 2:3791635/1‑100 (MQ=255)
gTCATCAGGGGTGATTTCAGGACCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACTCTGCATCTGCACGTAAGATCGCGCGGGTAATGGGCGaa < 1:1469914/100‑1 (MQ=255)
tcatcaGGGGTGATTTCAGGACCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACTCTGCATCTGCACGTAAGATCGCGCGGGTAATGGGCGAAt < 2:2303202/100‑1 (MQ=255)
catcaGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACTCTGCATCTGCACGTAAGATCGCGCGGGTAATGGGCGAATc > 2:931713/1‑100 (MQ=255)
catcaGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACTCTGCATCTGCACGTAAGATCGCGCGGGTAATGGGCGAATc > 2:1086104/1‑100 (MQ=255)
atcaGGGGTGATTTCAGGACCGTAGATAAAGGTCCGGTTCGGTGAAACCTGCTTCAACTCTGCATCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCa < 2:2179041/100‑1 (MQ=255)
atcaGGGGTGATTTCAGGACCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACTCTGCATCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCa < 1:3736931/100‑1 (MQ=255)
tcaGGGGTGATTTCAGGACCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACTCTGCATCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAg > 2:3567121/1‑100 (MQ=255)
caGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACTCTGCATCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGa < 2:3988700/100‑1 (MQ=255)
ggggTGATTTCAGGACCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACTCTGCATCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACg < 1:46590/100‑1 (MQ=255)
ggggTGATTTCAGGACCGTAGATAAAGGTCAGCTTCGGTGAAACCTGCTTCAACTCTGCATCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACg > 1:3923314/1‑100 (MQ=255)
gggTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACTCTGCATCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACgg > 1:88763/1‑100 (MQ=255)
ggTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACTCTGCATCTGCACGTAAGATCGCGAGGGTAATGGGAGAATCAGACgg > 2:1165946/1‑99 (MQ=255)
tGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACTCTGCATCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACGGGcc < 1:2218876/100‑1 (MQ=255)
tGATTTCAGGACCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACTCTGCATCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACGGGcc < 1:809981/100‑1 (MQ=255)
tgtctggATCGTAGATAAAAGTCAGGTAGGGTGAAACCTGCTTCAACGCTAGACCTGGACGTAAAATCGAGCGGGTAATGGGCAAATCAGACGGGCCGa < 2:3515651/94‑1 (MQ=255)
ttCAAGATCGTAGATAAAGGTCAGGTTCGGTGAAGCCTGCTTTAACTCTGCATCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACGGGCCg < 2:1150696/97‑1 (MQ=255)
cAGGACCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACTCTGCATCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACGGGCCGATAtt > 1:1306372/1‑100 (MQ=255)
ggATCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACTCTGCATCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACGGGCCGATATTgg > 1:3244701/1‑100 (MQ=255)
ggACCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACTCTGCATCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACGGGCCGATATTgg < 2:1567054/100‑1 (MQ=255)
aTCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACTCTGCATCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACGGGCCGATATTGGCg < 1:1260438/100‑1 (MQ=255)
|
TTTTATCATGCACCGGACCGTTGGCGATGTGCGGTTTGCTACATTCACAGATGTTCTTCGCCACTTCCAGCAGCAGGTCATCAGGGGTGATTTCAGGATCGTAGATAAAGGTCAGGTTCGGTGAAACCTGCTTCAACTCTGCATCTGCACGTAAGATCGCGCGGGTAATGGGCGAATCAGACGGGCCGATATTGGCG > NC_000913/4616393‑4616589
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
