Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F142 I0 R1
|
175 |
91.2 |
4812830 |
94.5% |
4548124 |
99.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
2,887,352 |
T→A |
100% |
intergenic (‑133/+226) |
ygcB ← / ← cysH |
Cascade complex anti‑viral R‑loop helicase‑annealase Cas3/phosphoadenosine phosphosulfate reductase; PAPS reductase, thioredoxin dependent |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,887,352 | 0 | T | A | 98.7%
| 397.0
/ ‑4.5
| 121 | intergenic (‑133/+226) | ygcB/cysH | Cascade complex anti‑viral R‑loop helicase‑annealase Cas3/phosphoadenosine phosphosulfate reductase; PAPS reductase, thioredoxin dependent |
| Reads supporting (aligned to +/- strand): ref base T (1/1); new base A (57/62); total (58/63) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 121 total aligned reads displayed.
ATCAGCGGGCTATTTTTCGATGCTGCTCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCA > NC_000913/2887256‑2887448
|
tCAGCGGGCTATTTTTCGATGCTGCTCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGttt > 1:575506/1‑100 (MQ=255)
cAGCGGGCTATTTTTCGATGCTGCTCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTg < 1:1745850/100‑1 (MQ=255)
cAGCGGGCTATTTTTCGATGCTGCTCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTg < 1:1495222/100‑1 (MQ=255)
cAGCGGGCTATTTTTCGATGCTGCTCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTg < 1:2333029/100‑1 (MQ=255)
aGCGGGCTATTTTTTTATTTTTTTTATACATATTTTATTACAGTGATATACATATTTCTTTTATCCCTGTCAATTAGAGCCTAACATTTGAATAGttttg > 2:1767964/1‑98 (MQ=255)
aGCGGGCTATTTTTCGATGCTGCTCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACCTTCGAATAGTTTgg > 2:1132281/1‑100 (MQ=255)
aGCGGGCTATTTTTCGATGCTGCTCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTgg > 1:988076/1‑100 (MQ=255)
aGCGGGCTATTTTTCGATGCTGCTCATAAATATCCAATTCCAGTGATATACCCATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTg > 1:1211523/1‑99 (MQ=255)
gggCTATTTTTCGATGCTGCTCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGtt > 1:227020/1‑100 (MQ=255)
ggCTATTTTTCGATGCTGCTCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTc < 1:1327552/100‑1 (MQ=255)
gCTATTTTTCGATGCTGCTCATAAATATCGTATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTc < 2:1396958/99‑1 (MQ=255)
cTATTTTTCGATGCTGCTCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCg < 1:664300/99‑1 (MQ=255)
cTATTTTTCGATGCTGCTCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGa > 1:1938416/1‑100 (MQ=255)
cTATTTTTCGATGCTGCTCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGa < 2:609344/100‑1 (MQ=255)
cTATTTTTCGATGCTGCTCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGa > 1:453499/1‑100 (MQ=255)
cTAATTTTCGATGTTGCTCATAAATAACGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGATACTAATATTCGAATAGTTTGGGTTCGa < 2:1181175/100‑1 (MQ=255)
tttCGATGCTGCTCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCt < 2:411463/100‑1 (MQ=255)
tCGATGCTGCTCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTgg < 1:2213837/100‑1 (MQ=255)
cGATGCTGCTCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGCTgg > 1:1953478/1‑99 (MQ=255)
cGATGCTGCTCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGc > 1:2223417/1‑100 (MQ=255)
gATGCTGCTCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGcc < 1:1504372/100‑1 (MQ=255)
gATGCTGCTCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGcc < 2:601350/100‑1 (MQ=255)
gATGCTGCTCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGcc > 1:194991/1‑100 (MQ=255)
gATGCTGCTCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGc < 2:954877/99‑1 (MQ=255)
tgctgcTCATAAATATCTAATTACAGTGTTATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTc < 2:1065811/100‑1 (MQ=255)
gcttctCATAAATATCGAATTACAGTGATAGACACATGTCGTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCa > 1:1039660/1‑100 (MQ=255)
gctgctCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCa > 2:878009/1‑100 (MQ=255)
ctgctCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAg < 1:2011308/100‑1 (MQ=255)
ctgctCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAg > 2:429568/1‑100 (MQ=255)
gcttctAAATATTGAATTAAATTGATATATACATGTTTTGCCTATTTGTAAAGAAGAGACTAACATTAGAATAGTTTGGGCTCGAAGGTTGGCCTCa > 2:819823/6‑97 (MQ=255)
gctCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTAGCCTCa > 2:2259293/1‑97 (MQ=255)
cATAAATATCGAATTACAGTGATATACACGTGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGATGGCCTCAGGTTGa > 1:37208/1‑100 (MQ=255)
cATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGa < 1:1542623/100‑1 (MQ=255)
cATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGa > 1:1579657/1‑100 (MQ=255)
cATAAATATCAAATTACAGATATATACACATGTCTTACCTCCCTATAAAGAAGAGACTAACATTCGAATAGTTAGGATTCGAACGCAGGCCTCAGGTTGa > 2:2090604/1‑100 (MQ=255)
aTAAATTTCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGAt < 1:1915172/100‑1 (MQ=255)
tAAATATAGAATTTCATTGTTATACACATGTTTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGTTTCGAATGCTGGCCTCAGGTTGAt < 2:287012/99‑1 (MQ=255)
tatCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGaan < 1:1996219/100‑2 (MQ=255)
atCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAat > 1:1203457/1‑100 (MQ=255)
tCGAATTACAGTGATATACACATGTCTTGCCTCCCTTCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGaaa > 2:1539024/1‑98 (MQ=255)
tCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAata < 2:960528/100‑1 (MQ=255)
gAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATc > 1:2039422/1‑100 (MQ=255)
aaTTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCg < 1:959468/100‑1 (MQ=255)
aaTTACAGTGATATACACATGTCTTGCCTCCCTGAAAAGAAGAGACTAACATTCGAATAGGTTGGGTTCGAACGCTAGACTAAGGTTAATAGAAatat > 2:2148288/1‑98 (MQ=255)
ttACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGcc < 2:300123/100‑1 (MQ=255)
ttACAGTGATATAAACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGcc > 1:1624874/1‑100 (MQ=255)
aCAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTg < 1:911426/100‑1 (MQ=255)
aGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTggg < 1:1252650/100‑1 (MQ=255)
gTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTgggg > 1:1279922/1‑100 (MQ=255)
tGATATACACATGTCTTGCCTCCCCGCAAAGAAGAGACTAACATTCGAATAGTGTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTgggg < 2:38192/99‑1 (MQ=255)
gATATCCACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTgg > 2:1289139/1‑96 (MQ=255)
gATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCt < 1:1061592/100‑1 (MQ=255)
tataCACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCttt > 2:974524/1‑100 (MQ=255)
tataCACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCttt > 1:1715858/1‑100 (MQ=255)
ataCACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCtttt < 2:1949811/100‑1 (MQ=255)
taCACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTg > 1:2338518/1‑100 (MQ=255)
taCACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTg > 1:165830/1‑100 (MQ=255)
taCACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGACTCAGGTTGATAGAAATATCGCCTGGGGCTTTTg < 2:944608/100‑1 (MQ=255)
taCACATGTCTTGCCTCCCTGAAAAAAAGAAACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGATACTTTTg > 2:1017788/1‑100 (MQ=255)
acacATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGt < 1:1840539/100‑1 (MQ=255)
acacATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGt < 2:1958237/100‑1 (MQ=255)
cacaTGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTc < 1:818603/100‑1 (MQ=255)
cacaTGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTc < 1:206148/100‑1 (MQ=255)
aTGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCAt > 1:1494610/1‑100 (MQ=255)
gTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGATATATCGCATGGGGCTTTTGTCCAt > 2:236412/1‑98 (MQ=255)
tCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTg > 1:1918127/1‑100 (MQ=255)
tCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTg < 2:1287882/100‑1 (MQ=255)
tCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTg < 2:2243125/100‑1 (MQ=255)
ccTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAAcc < 1:150592/100‑1 (MQ=255)
ccTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAAcc > 1:959874/1‑100 (MQ=255)
ccTCCCTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAAcc > 2:128632/1‑100 (MQ=255)
ccTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATATAAATATCAACTGGGGCTTTTGTCCATCTGGAACCTcg > 1:2021439/1‑99 (MQ=255)
ccTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTcgc < 2:142920/100‑1 (MQ=255)
cTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTcgcg < 1:411198/100‑1 (MQ=255)
cTGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTcgcg < 1:98784/100‑1 (MQ=255)
tGCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGa > 1:1839666/1‑100 (MQ=255)
gCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGaa > 1:1051105/1‑100 (MQ=255)
gCAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGaa < 1:457311/100‑1 (MQ=255)
cAAAGAAGCGACTAACATTCGAATAGTTTGGGTTCTGTCGCTGGCCTTAGGTTGATAGAAATATCGCCTGGGGTTTTTGTCCATCTGGAACCTcg < 2:1018930/95‑1 (MQ=255)
cAAAGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAAt > 2:1938814/1‑100 (MQ=255)
aaaGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATg > 2:891293/1‑100 (MQ=255)
aaaGAAGAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATg < 2:2213414/100‑1 (MQ=255)
aagaagAGGCTAACATTCGAATAGTTTAGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGc < 1:888598/100‑1 (MQ=255)
aagaagAGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGc < 1:1373466/100‑1 (MQ=255)
aagaagAGACTAACATTCGAATAGATTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGaa > 2:2054829/1‑97 (MQ=255)
agaagaGACTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCt < 1:1388381/100‑1 (MQ=255)
gagaCTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAAc < 2:1039650/100‑1 (MQ=255)
agaCTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACg < 2:2039400/100‑1 (MQ=255)
gaCTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGc > 1:1942651/1‑100 (MQ=255)
gaCTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGc > 2:1522835/1‑100 (MQ=255)
aCTAACATTCGAATTGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGcc < 2:1953456/100‑1 (MQ=255)
cTAACATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCa < 2:194988/100‑1 (MQ=255)
aaCATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCa < 1:543158/98‑1 (MQ=255)
aCATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGAc < 1:596471/100‑1 (MQ=255)
aCATTCGAATAGTTTGGGTTCGAACGCTAACCTCAGGTTGATAGAAATATCGACTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGAc > 2:1047124/1‑100 (MQ=255)
cATTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACa > 1:780595/1‑100 (MQ=255)
aTTCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAg > 2:1629620/1‑100 (MQ=255)
ttCGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCGTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGc > 2:2248913/1‑100 (MQ=255)
cGAATAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCGTCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCt < 1:1692659/100‑1 (MQ=255)
aaTAGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCa < 2:1461019/100‑1 (MQ=255)
|
ATCAGCGGGCTATTTTTCGATGCTGCTCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCA > NC_000913/2887256‑2887448
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
