Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F142 I0 R1
|
175 |
91.2 |
4812830 |
94.5% |
4548124 |
99.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,881,837 |
G→T |
26.7% |
T162N (ACC→AAC) |
dnaN ← |
DNA polymerase III, beta subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,881,837 | 0 | G | T | 26.7%
| 266.1
/ 92.0
| 141 | T162N (ACC→AAC) | dnaN | DNA polymerase III, beta subunit |
| Reads supporting (aligned to +/- strand): ref base G (49/53); new base T (22/16); total (72/69) |
| Fisher's exact test for biased strand distribution p-value = 3.45e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 148 total aligned reads displayed.
ACGATCACCGAATGGCTTGGCAAAGATTGACCAATTGGCATTGAACAGACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGGTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATGCGCCATAGAAAACTGGGTCGCTTCAATCAGACGCTTCATCGTTGCCTGCGGCAGGG > NC_000913/3881738‑3881936
|
aCGATCACCGAATGGCTTGGCAAAGATTGACCAATTGGCATTGAACAGACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCgg < 2:41099/100‑1 (MQ=255)
aCGATCACCGAATGGCTTGGCAAAGATTGACCAATTGGCATTGAACAGACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCgg < 2:1241990/100‑1 (MQ=255)
cGATCACCGAATGGCTTGGCAAAGATTGACCAATTGGCATTGAACAGACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGGt > 1:2395678/1‑100 (MQ=255)
cGATCACCGAATGGCTTGGCAAAGATTGACCAATTGGCATTGAACAGACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGGt < 2:1230066/100‑1 (MQ=255)
tCACCGAATGGCTTGGCAAAGATTGACCAATTGGCATTGAACAGACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGTTTTc < 2:2241511/100‑1 (MQ=255)
cACCGAATGGCTTGGCAAAGATTGACCAATTGGCATTGAACAGACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGTTTTCa < 2:1041231/100‑1 (MQ=255)
cACCGAATGGCTTGGCAAAGATTGACCAATTGGCATTGAACAGACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGTTTTCa > 1:1249053/1‑100 (MQ=255)
cACCGAATGGCTTGGCAAAGATTGACCAATTGGCATTGAACAGACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGGTTTCa > 1:78796/1‑100 (MQ=255)
cACCGAATGGCTTGGCAAAGATTGACCAATTGGCATTGAACAGACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGGTTTCa < 2:491632/100‑1 (MQ=255)
aCCGAATGGCTTGGCAAAGATTGACCAATTGGCATTGAACAGACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGTTTTCaa > 1:2157862/1‑100 (MQ=255)
ccGAATGGCTTGGCAAAGATTGACCAATTGGCATTGAACAGACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGGTTTCaaa > 1:208143/1‑100 (MQ=255)
cGAATGGCTTGGCAAAGATTGACCAATTGGCATTGAACAGACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGGTTTCAAAc < 1:1582126/100‑1 (MQ=255)
ggCTTGGCAAAGATTGACCAATTGGCATTGAACAGACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGGTTTCAAACAGCAt > 1:322506/1‑100 (MQ=255)
gCTTGGCAAAGATTGACCAATTGGCATTGAACAGACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGTTTTCAAACAGCATa < 2:125681/100‑1 (MQ=255)
gCTTGGCAAAGATTGACCAATTGGCATTGAACAGACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGGTTTCAAACAGCATa < 1:1970072/100‑1 (MQ=255)
cTTGGCAAAGATTGACCAATTGGCATTGAACAGACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGGTTTCAAACAGCATAc > 2:1150517/1‑100 (MQ=255)
ggCAAAGATTGACCAATTGGCATTGAACAGACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGTTTTCAAACAGCATACCAt > 2:868030/1‑100 (MQ=255)
ggCAAAGATTGACCAATTGGCATTGAACAGACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGGTTTCAAACAGCATACCAt > 1:657985/1‑100 (MQ=255)
ctaaGATTGACCAATTGGCATTGAACAGACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGGTTTCAAACAGCATACCAttt < 1:1235049/98‑1 (MQ=255)
aaaGATTGACCAATTGGCATTGAACAGACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGGTTTCAAACAGCATACCATTTa < 1:725927/100‑1 (MQ=255)
aaaGATTGACCAATTGGCATTGAACAGACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGGTTTCAAACAGCATACCATTTa < 2:890450/100‑1 (MQ=255)
aGATTGACCAATTGGCATTGAACAGACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCATCGTTTTCAAACAGCATACCATTTAAg > 2:668720/1‑100 (MQ=255)
gATTGACCAATTGGCATTGAACAGACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGGTTTCAAACAGCATACCATTTAAGt < 1:1373962/100‑1 (MQ=255)
aTTGACCAATTGGCATTGAACAGACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGTTTTCAAACAGCATACCATTTAAGTa < 2:799510/100‑1 (MQ=255)
aTTGACCAATTGGCATTGAACAGACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGGTTTCAAACAGCATACCATTTAAGTa < 1:1760433/100‑1 (MQ=255)
gACCAATTGGCATTGAACAGACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGTTTTCAAACAGCATACCATTTAAGTAATa < 2:1363723/100‑1 (MQ=255)
gACCAATTGGCATTGAACAGACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGGTTTCAAACAGCATACCATTTAAGTAATa > 2:420020/1‑100 (MQ=255)
gACCAATTGGCATTGAACAGACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGGTTTCAAACAGCATACCATTTAAGTAATa > 1:1212252/1‑100 (MQ=255)
aCCAATTGGCATTGAACAGACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGGTTTCAAACAGCATACCATTTAAGTAATAg < 1:109652/100‑1 (MQ=255)
ccAATTGGCATTGAACAGACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGGTTTCAAACAGCATACCATTTAAGTAATAGc > 2:940985/1‑100 (MQ=255)
aaTTGGCATTGAACAGACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGGTTTCAAACAGCATACCATTTAAGTAATAGCGa > 1:1667101/1‑100 (MQ=255)
tGGCATTGAACAGACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGGTTTCAAACAGCATACCATTTAAGTAATAGCGAACg < 1:428351/100‑1 (MQ=255)
ggCATTGAACAGACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGGTTTCAAACAGCATACCATTTAAGTAATAGCGAACGt > 1:1451738/1‑100 (MQ=255)
ggCATTGAACAGACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGGTTTCAAACAGCATACCATTTAAGTAATAGCGAACGt > 1:484255/1‑100 (MQ=255)
ggCATTGAACAGACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGGTTTCAAACAGCATACCATTTAAGTAATAGCGAACGt > 1:1180883/1‑100 (MQ=255)
cATTGAACAGACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGTTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTcc > 2:1653136/1‑100 (MQ=255)
cATTGAACAGACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGTTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTcc > 1:2366774/1‑100 (MQ=255)
cATTGAACAGACCGCCAGACGGTCGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGGTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTcc > 2:624035/1‑100 (MQ=255)
aTTGAACAGACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGTTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCt < 1:1273898/100‑1 (MQ=255)
aTTGAACAGACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGTTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCt > 2:1993063/1‑100 (MQ=255)
tGAACAGACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGGTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGa < 2:1445556/100‑1 (MQ=255)
gAACAGACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGGTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGAt > 1:2223129/1‑100 (MQ=255)
aaCAGACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGTTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATg < 1:933774/100‑1 (MQ=255)
cAGACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGGTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATgcg < 2:1719477/100‑1 (MQ=255)
aGACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGGTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATgcgc < 2:1244170/100‑1 (MQ=255)
aGACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGGTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATgcgc < 2:347609/100‑1 (MQ=255)
gACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGTTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATGCGcc < 2:1445603/100‑1 (MQ=255)
gACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGGTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATGCGcc > 2:1805308/1‑100 (MQ=255)
gACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGGTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATGCGcc < 2:480624/100‑1 (MQ=255)
aCCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGGTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATGCGCCa < 2:2055560/100‑1 (MQ=255)
ccGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGTTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATGCGCCAt < 1:162083/100‑1 (MQ=255)
ccGCCAGACGGTAGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGTTTTCAAACAGCCTACCATTTAAGTAATAGCGAACGTCCTGATgcg > 2:1982979/1‑96 (MQ=255)
cGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGGTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATGAGCAATa > 1:1862944/1‑100 (MQ=255)
gCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGGTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATGCGCCATAg > 2:354553/1‑100 (MQ=255)
aGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGGTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATGCGCCATAGaaa < 2:1264656/100‑1 (MQ=255)
gACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGGTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATGCGCCATAGaaaa > 1:242890/1‑100 (MQ=255)
gACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGGTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATGCGCCATAGaaaa > 1:2344351/1‑100 (MQ=255)
cGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGTTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATGCGCCATAGAAAACt > 1:176376/1‑100 (MQ=255)
ggTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGGTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATGCGCCATAGAAAACTg < 1:1288819/100‑1 (MQ=255)
ggCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGGTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATGCGCCATAGAAAACTGGGt < 1:1143604/100‑1 (MQ=255)
ccGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGTTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATGCGCCATAGAAAACTGGGTCg > 1:602008/1‑100 (MQ=255)
ccGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGGTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATGCGCCATAGAAAACTGGGTCg > 1:2141599/1‑100 (MQ=255)
cGTTGGTTGCCACGGTGCGCAGTTCTTCACCTTCGTTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTTCTGATGCGCCATAGAAAACTGGGTCg < 2:1568433/99‑1 (MQ=255)
cGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGGTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATGCGCCATAGAAAACTGGGTCGc > 2:1361130/1‑100 (MQ=255)
tCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGGTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATGCGCCATAGAAAACTGGGTCGCtt < 2:2071910/100‑1 (MQ=255)
ggTTGCCACGGTGCGCAGTTCTTCACCTTCGGTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATGCGCCATAGAAAACTGGGTCGCTTCa < 1:2007500/100‑1 (MQ=255)
ttGCCACGGTGCGCAGTTCTTCACCTTCGGTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATGCGCCATAGAAAACTGGGTCGCTTCAAt < 1:1962234/100‑1 (MQ=255)
tGCCACGGTGCGCAGTTCTTCACCTTCGTTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATGCGCCATAGAAAACTGGGTCGCTTCAATc < 2:484527/100‑1 (MQ=255)
tGCCACGGTGCGCAGTTCTTCACCTTCGTTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATGCGCCATAGAAAACTGGGTCGCTTCAATc > 2:1741037/1‑100 (MQ=255)
tGCCACGGTGCGCAGTTCTTCACCTTCGGTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATGCGCCATAGAAAACTGGGTCGCTTCAATc < 1:241524/100‑1 (MQ=255)
tGCCACGGTGCGCAGTTCTTCACCTTCGGTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATGCGCCATAGAAAACTGGGTCGCTTCAATc < 2:797755/100‑1 (MQ=255)
gCCACGGTGCGCAGTTCTTCACCTTCGGTTTCAAACGGCATACCATTTAAGTAATAGCGAACGTCCTGATGCGCCATAGAAAACTGGGTCGCTTCAATCa < 2:1322226/100‑1 (MQ=255)
ccACGGTGCGCAGTTCTTCACCTTCGGTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATGCGCCATAGAAAACTGGGTCGCTTCAATCAg > 1:2073780/1‑100 (MQ=255)
ccACGGTGCGCAGTTCTTCACCTTCGGTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATGCGCCATAGAAAACTGGGTCGCTTCAATCAg > 2:700951/1‑100 (MQ=255)
ccACGGTGCGCAGTTCTTCACCTTCGGTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATGCGCCATAGAAAACTGGGTCGCTTCAATCAg > 1:2277184/1‑100 (MQ=255)
cACGGTGCGCAGTTCTTCACCTTCGGTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATGCGCCATAGAAAACTGGGTCGCTTCAATCAGa > 2:1859494/1‑100 (MQ=255)
cGGTGCGCAGTTCTTCACCTTCGGTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATGCGCCATAGAAAACTGGGTCGCTTCAATCAGACg < 1:1361144/100‑1 (MQ=255)
tacgcAGTTCTTCACCTTCGTGTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATCCGCCATAGAAAACTGGATCGCTTCAATCAGACGCtt > 2:466223/3‑100 (MQ=255)
gcgcAGTTCTTCACCTTCGTTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCCGATGCGCCATAGAAAACTGGGTCGCTTCAATCAGACGCTTc > 2:307370/1‑100 (MQ=255)
gcgcAGTTCTTCACCTTCGGTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATGCGCCATAGAAAACTGGGTCGCTTCAATCAGACGCTTc > 2:848405/1‑100 (MQ=255)
cgcAGTTCTTCACCTTCGGTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATGCGCCATAGAAAACTGGGTCGCTTCAATCAGACGCTTCa > 1:1034567/1‑100 (MQ=255)
cAGTTCTTCACCTTCGGTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATGCGCCATAGAAAACTGGGTCGCTTCAATCAGACGCTTCATc > 1:1487294/1‑100 (MQ=255)
aGTTCTTCACCTTCGTTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATGCGCCATAGAAAACTGGGTCGCTTCAATCAGACGCTTCATCg < 1:680216/100‑1 (MQ=255)
tcttcACCTTCGTTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATGCGCCATAGAAAACTGGGTCGCTTCAATCAGACGCTTCATCGTTg < 1:184625/100‑1 (MQ=255)
tcttcACCTTCGGTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATGCGCCATAGAAAACTGGGTCGCTTCAATCAGACGCTTCATCGTTg < 1:611910/100‑1 (MQ=255)
tcttcACCTTCGGTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATGCGCCATAGAAAACTGGGTCGCTTCAATCAGACGCTTCATCGTTg < 1:488022/100‑1 (MQ=255)
cttcACCTTCGTTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATGCGCAATAGAAAACTGGGTCGCTTCAATCAGACGCTTCATCGTTGc > 2:1054567/1‑100 (MQ=255)
cttcACCTTCGGTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATGCGCCATAGAAAACTGGGTCGCTTCAATCAGACGCTTCATCGTTGc < 1:320001/100‑1 (MQ=255)
cttcACCTTCGGTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATGCGCCATAGAAAACTGGGTCGCTTCAATCAGACGCTTCATCGTTGc > 1:1134852/1‑100 (MQ=255)
tttactttCGGTTTCAAACAGTATACCATTTAAGTAATAGCGGACGTCCTGATGCGCCATAGAAAACTGGGTCGCTTCAATCAGACGCTTCATCGTTGc < 1:41881/93‑1 (MQ=255)
ccTTCGTTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATGCGCCATAGAAAACTGGGTCGCTTCAATCAGACGCTTCATCGTTGCCTGCg > 1:2222555/1‑100 (MQ=255)
ccTTCGGTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATGCGCCATAGAAAACTGGGTCGCTTCAATCAGACGCTTCATCGTTGccagat > 1:1380913/1‑96 (MQ=255)
ccTTCGGTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATGCGCCATAGAAAACTGGGTCGCTTCAATCAGACGCTTCATCGTTGCCTGCg > 1:1315667/1‑100 (MQ=255)
cTTCGGTTTCAAACAGCATACCAATAAAGTAATAACGAACGTACTGATGCGCAATAGAAAACTAGGTCGCTTCAAACAGACACTTCATCGtt > 2:608950/1‑92 (MQ=255)
ttCGGTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATGCGCCATAGAAAACTGGGTCGCTTCAATCAGACGCTTCATCGTTGCCTGCGGc < 1:1044753/100‑1 (MQ=255)
tCGGTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATGCGCCATAGAAAACTGGGTCGCTTCAATCAGACGCTTCATCGTTGCCTGCGGCa < 2:194165/100‑1 (MQ=255)
cGGTTTCACAACGCATACAATTTAAGTAATAGCGAACGTCCTGATGCGCCATAGAAAACTGGGTCGCTTCAATCAGACGCTTCATCGTTGCCTGCGGc < 1:1553138/98‑1 (MQ=255)
ggTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATGCGCCATAGAAAACTGGGTCGCTTCAATCAGACGCTTCATCGTTGCCTGCGGCAgg > 2:1297338/1‑100 (MQ=255)
gTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATGCGCCATAGAAAACTGGGTCGCTTCAATCAGACGCTTCATCGTTGCCTGCGGCAggg > 1:788418/1‑100 (MQ=255)
gTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATGCGCCATAGAAAACTGGGTCGCTTCAATCAGACGCTTCATCGTTGCCTGCGGCAggg < 1:998102/100‑1 (MQ=255)
|
ACGATCACCGAATGGCTTGGCAAAGATTGACCAATTGGCATTGAACAGACCGCCAGACGGTGGCCGTCGGTTGCCACGGTGCGCAGTTCTTCACCTTCGGTTTCAAACAGCATACCATTTAAGTAATAGCGAACGTCCTGATGCGCCATAGAAAACTGGGTCGCTTCAATCAGACGCTTCATCGTTGCCTGCGGCAGGG > NC_000913/3881738‑3881936
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
