Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F50 I3 R1 283 58.3 1819865 98.8% 1798026 150.1

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,403,176 C→T P380L (CCG→CTG)  hflK → modulator for HflB protease specific for phage lambda cII repressor

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,403,1760CT100.0% 213.8 / NA 56P380L (CCG→CTG) hflKmodulator for HflB protease specific for phage lambda cII repressor
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (30/26);  total (30/26)

ATGGAAAAAGTGTTGGGTAACACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCAGGGCGATATTATGGACCAACGCCGCGCCAACGCGCAGCGTAACGACTACCAGCGTCAGGGGGAATAACGATGCGTAAGTCAGTTATC  >  NC_000913/4403028‑4403317
                                                                                                                                                    |                                                                                                                                             
aTGGAAAAAGTGTTGGGTAACACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCtgctgc                                                                                                                                             >  1:882595/1‑151 (MQ=255)
 tGGAAAAAGTGTTGGGTAACACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTgctgcc                                                                                                                                            >  2:290919/1‑151 (MQ=255)
  ggAAAAAGTGTTGGGTAACACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTgctgcc                                                                                                                                            <  1:302675/150‑1 (MQ=255)
   gAAAAAGTGTTGGGTAACACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTgctgcc                                                                                                                                            >  1:279309/1‑149 (MQ=255)
     aaaaGTGTTGGGTAACACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCTGCCAGcc                                                                                                                                        >  1:653292/1‑151 (MQ=255)
      aaaGTGTTGGGTAACACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCTGCCAGCct                                                                                                                                       >  1:443332/1‑151 (MQ=255)
          tgtTGGGTAACACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCTGCCAGCCTCTtc                                                                                                                                   >  1:645852/1‑151 (MQ=255)
                gTAACACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCTGCCAGCCTCTTCCTCcac                                                                                                                             <  2:101855/151‑1 (MQ=255)
                    cacCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCTGCCAGCCTCTTCCTCCACAAcc                                                                                                                         >  2:481743/1‑151 (MQ=255)
                     acCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCTGCCAGCCTCTTCCTCCACAAcc                                                                                                                         >  2:332654/1‑150 (MQ=255)
                     acCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCTGCCAGCCTCTTCCTCCACAAcc                                                                                                                         >  2:584207/1‑150 (MQ=255)
                      cccGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCTGCCAGCCACTTCCTCCACAACCa                                                                                                                        <  2:621109/150‑1 (MQ=255)
                         gCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCTGCCAGCCTCTTCCTCCACAACCAGTgg                                                                                                                    <  2:120073/151‑1 (MQ=255)
                         gCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCTGCCAGCCTCTTCCTCCACAACCAGTgg                                                                                                                    >  2:203287/1‑151 (MQ=255)
                             aGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCTGCCAGCCTCTTCCTCCACAACCAGTGGagca                                                                                                                <  1:573984/151‑1 (MQ=255)
                                 cTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCTGCCAGCCTCTTCCTCCACAACCAGTGGagcaagc                                                                                                             >  2:80048/1‑150 (MQ=255)
                                  tGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCTGCCAGCCTCTTCCTCCACAACCAGTGGagcaagca                                                                                                            >  1:401972/1‑150 (MQ=255)
                                    gTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAATGGTGCCAGCAATCTGCTGCGTCTGCTGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAac                                                                                                          >  1:656558/1‑150 (MQ=255)
                                       aaCGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCTGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACAcgt                                                                                                      >  2:336972/1‑151 (MQ=255)
                                        aCGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCTGCCAGCCTCTTCCTCCACAAc                                                                                                                          <  2:23052/130‑1 (MQ=255)
                                        aCGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCTGCCAGCCTCTTCCTCCACAAc                                                                                                                          >  1:23074/1‑130 (MQ=255)
                                            tAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCTGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTcc                                                                                                 >  2:749936/1‑151 (MQ=255)
                                             aaaGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCTGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTcc                                                                                                 >  1:575242/1‑150 (MQ=255)
                                             aaaGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCTGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTcc                                                                                                 <  1:598184/150‑1 (MQ=255)
                                              aaGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCTGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTccac                                                                                               <  2:527118/151‑1 (MQ=255)
                                                  tGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCTGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGt                                                                                           >  1:535758/1‑151 (MQ=255)
                                                     cAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCTGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTc                                                                                          >  2:112692/1‑149 (MQ=255)
                                                     cAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCTGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTc                                                                                          >  1:194161/1‑149 (MQ=255)
                                                      aaCCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCTGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCAgg                                                                                       <  1:435788/151‑1 (MQ=255)
                                                      aaCCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCTGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCAgg                                                                                       <  2:585787/151‑1 (MQ=255)
                                                         cTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCTGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCAGGGCg                                                                                    >  2:402935/1‑151 (MQ=255)
                                                            aTGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCTGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCAGGGCGat                                                                                  >  2:108417/1‑150 (MQ=255)
                                                             tGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCTGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCAGGGCGatat                                                                                >  2:832309/1‑151 (MQ=255)
                                                                         gaGAACAGATGCTGACAGGGGGTAACCCCCCTGCGGCGAAGAGAGATAACGGTGCCAGCAATCTGCGGCGTCTGCTGTGAGCGTCTTCATACACAAAAAGTGGAGCAAGCAACACGACGTACACCAGCCAGGCGGATATAATGGACCa                                                                       >  2:549853/2‑148 (MQ=255)
                                                                          aGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCTGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCAGGGCGATATTATGGACCAAcgc                                                                   <  2:235306/151‑1 (MQ=255)
                                                                           gACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCTGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCAGGGCGATATTATGGACCAAcgcc                                                                  <  1:286822/151‑1 (MQ=255)
                                                                              cAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCTGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCAGGGCGATATTATGGACCAACGCcgcg                                                               >  1:728325/1‑151 (MQ=255)
                                                                                   gCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCTGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCAGGGCGATATTATGGACCAACGCCGCGCCAAc                                                          <  1:342536/151‑1 (MQ=255)
                                                                                       aaaGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCTGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCAGGGCGATATTATGGACCAACGCCGCGCCAACgcgc                                                      >  1:478076/1‑151 (MQ=255)
                                                                                        aaGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCTGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCAGGGCGATATTATGGACCAACGCCGCGCCAACGCGCa                                                     <  1:687425/151‑1 (MQ=255)
                                                                                             ggtAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCTGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCAGGGCGATATTATGGACCAACGCCGCGCCAACGCGCAGCGt                                                 >  1:24539/1‑150 (MQ=255)
                                                                                                       cTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCTGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCAGGGCGATATTATGGACCAACGCCGCGCCAACGCGCAGCGTAACGACTAcc                                       >  2:636213/1‑150 (MQ=255)
                                                                                                         gcggcgAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCTGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCAGGGCGATATTATGGACCAACGCCGCGCCAACGCGCAGCGTAACGACTACCa                                      <  2:350683/149‑1 (MQ=255)
                                                                                                         gcggcgAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCTGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCAGGGCGATATTATGGACCAACGCCGCGCCAACGCGCAGCGTAACGACTACCAGc                                    >  2:704806/1‑151 (MQ=255)
                                                                                                           ggcgAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCTGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCAGGGCGATATTATGGACCAACGCCGCGCCAACGCGCAGCGTAACGACTACCAGCGt                                  >  1:4107/1‑151 (MQ=255)
                                                                                                            gcgAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCTGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCAGGGCGATATTATGGACCAACGCCGCGCCAACGCGCAGCGTAACGACTACCAGCGTc                                 >  1:385486/1‑151 (MQ=255)
                                                                                                                agagCGATAACGGTGCCAGCAATCTGCTGCGTCTGCTGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCAGGGCGATATTATGGACCAACGCCGCGCCAACGCGCAGCGTAACGACTACCAGCGTCAggg                             >  1:863270/1‑151 (MQ=255)
                                                                                                                 gagCGATAACGGTGCCAGCAATCTGCTGCGTCTGCTGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCAGGGCGATATTATGGACCAACGCCGCGCCAACGCGCAGCGTAACGACTACCAGCGTCAgggg                            <  1:805552/151‑1 (MQ=255)
                                                                                                                        aaCGGTGCCAGCAATCTGCTGCGTCTGCTGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCAGGGCGATATTATGGACCAACGCCGCGCCAACGCGCAGCGTAACGACTACCAGCGTCAGGGGGAATAAc                     <  1:247498/151‑1 (MQ=255)
                                                                                                                        aaCGGTGCCAGCAATCTGCTGCGTCTGCTGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCAGGGCGATATTATGGACCAACGCCGCGCCAACGCGCAGCGTAACGACTACCAGCGTCAGGGGGAATAAc                     <  2:138959/151‑1 (MQ=255)
                                                                                                                            gTGCCAGCAATCTGCTGCGTCTGCTGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCAGGGCGATATTATGGACCAACGCCGCGCCAACGCGCAGCGTAACGACTACCAGCGTCAGGGGGAATAACGATg                 <  1:723826/151‑1 (MQ=255)
                                                                                                                             tGCCAGCAATCTGCTGCGTCTGCTGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCAGGGCGATATTATGGACCAACGCCGCGCCAACGCGCAGCGTAACGACTACCAGCGTCAGGGGGAATAACGATGc                >  2:533108/1‑151 (MQ=255)
                                                                                                                              gCCAGCAATCTGCTGCGTCTGCTGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCAGGGCGATATTATGGACCAACGCCGCGCCAACGCGCAGCGTAACGACTACCAGCGTCAGGGGGAATAACGATGCg               <  2:401946/151‑1 (MQ=255)
                                                                                                                              gCCAGCAATCTGCTGCGTCTGCTGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCAGGGCGATATTATGGACCAACGCCGCGCCAACGCGCAGCGTAACGACTACCAGCGTCAGGGGGAATAACGATGCg               <  1:753808/151‑1 (MQ=255)
                                                                                                                                cAGCAATCTGCTGCGTCTGCTGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCAGGGCGATATTATGGACCAACGCCGCGCCAACGCGCAGCGTAACGACTACCAGCGTCAGGGGGAATAACGATGCGTa             <  2:342966/151‑1 (MQ=255)
                                                                                                                                  gCAATCTGCTGCGTCTGCTGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCAGGGCGATATTATGGACCAACGCCGCGCCAACGCGCAGCGTAACGACTACCAGCGTCAGGGGGAATAACGATGCGTAAg           <  1:189613/151‑1 (MQ=255)
                                                                                                                                    aaTCTGCTGCGTCTGCTGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCAGGGCGATATTATGGACCAACGCCGCGCCAACGCGCAGCGTAACGACTACCAGCGTCAGGGGGAATAACGATGCGTAAGTc         <  1:112714/151‑1 (MQ=255)
                                                                                                                                    aaTCTGCTGCGTCTGCTGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCAGGGCGATATTATGGACCAACGCCGCGCCAACGCGCAGCGTAACGACTACCAGCGTCAGGGGGAATAACGATGCGTAAGTc         <  2:194136/151‑1 (MQ=255)
                                                                                                                                         gctgcGTCTGCTGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCAGGGCGATATTATGGACCAACGCCGCGCCAACGCGCAGCGTAACGACTACCAGCGTCAGGGGGAATAACGATGCGTAAGTCAGTTa    <  1:834135/151‑1 (MQ=255)
                                                                                                                                            gcGTCTGCTGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCAGGGCGATATTATGGACCAACGCCGCTCCAACGCGCAGCGTAACGACTACCAGCGTCAGGGGGAATAACGATGCGTAAGTCAGTTATc  <  2:777821/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                             
ATGGAAAAAGTGTTGGGTAACACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCAGGGCGATATTATGGACCAACGCCGCGCCAACGCGCAGCGTAACGACTACCAGCGTCAGGGGGAATAACGATGCGTAAGTCAGTTATC  >  NC_000913/4403028‑4403317

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A