Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F50 I1 R1
|
157 |
93.7 |
2947622 |
98.1% |
2891617 |
150.3 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,293,491 |
C→T |
intergenic (‑569/‑36) |
hns ← / → tdk |
global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,293,491 | 0 | C | T | 99.0%
| 382.9
/ NA
| 99 | intergenic (‑569/‑36) | hns/tdk | global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (48/50); total (49/50) |
| Fisher's exact test for biased strand distribution p-value = 4.95e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
CAGCAGTCATTTACCCGCTTATAACAAGCGAGGCAGTTGTAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGCCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCATTGTTGCAATCTTCATACAATTACCAGGAACGCGGCATGCGCACTGTCGTATATACGG > NC_000913/1293344‑1293638
|
cagcagTCATTTACCCGCTTATAACAAGCGAGGCAGTTGTAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCaa < 1:1234284/151‑1 (MQ=255)
cagcagTCATTTACCCGCTTATAACAAGCGAGGCAGTTGTAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCaa < 1:1299168/151‑1 (MQ=255)
gcagTCATTTACCCGCTTATAACAAGCGAGGCAGTTGTAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACt < 2:881877/151‑1 (MQ=255)
cagTCATTTACCCGCTTATAACAAGCGAGGCAGTTGTAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACtt > 2:537939/1‑151 (MQ=255)
tCATTTACCCGCTTATAACAAGCGAGGCAGTTGTAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTAt > 1:183990/1‑151 (MQ=255)
cATTTACCCGCTTATAACAAGCGAGGCAGTTGTAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTAt < 2:1341698/150‑1 (MQ=255)
tttACCCGCTTATAACAAGCGAGGCAGTTGTAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTAttt > 2:1383757/1‑150 (MQ=255)
ttACCCGCTTATAACAAGCGAGGCAGTTGTAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTc < 2:503074/150‑1 (MQ=255)
aCCCGCTTATAACAAGCGAGGCAGTTGTAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCata < 2:38231/151‑1 (MQ=255)
aCCCGCTTATAACAAGCGAGGCAGTTGTAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCata < 1:530419/151‑1 (MQ=255)
aCCCGCTTATAACAAGCGAGGCAGTTGTAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCata < 1:1024314/151‑1 (MQ=255)
cccGCTTATAACAAGCGAGGCAGTTGTAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCatat > 1:856384/1‑151 (MQ=255)
ccGCTTATAACAAGCGAGGCAGTTGTAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATc < 2:725365/151‑1 (MQ=255)
gCTTATAACAAGCGAGGCAGTTGTAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCAt < 1:205671/151‑1 (MQ=255)
tataACAAGCGAGGCAGTTGTAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTg > 2:58872/1‑150 (MQ=255)
tataACAAGCGAGGCAGTTGTAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTg < 1:163320/150‑1 (MQ=255)
tataACAAGCGAGGCAGTTGTAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTg < 2:1308993/150‑1 (MQ=255)
tataACAAGCGAGGCAGTTGTAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTg < 2:301528/150‑1 (MQ=255)
aaCAAGCGAGGCAGTTGTAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAggg > 2:133698/1‑151 (MQ=255)
cAAGCGAGGCAGTTGTAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGcc < 1:328831/151‑1 (MQ=255)
cAAGCGAGGCAGTTGTAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGcc > 2:543073/1‑151 (MQ=255)
aaGCGAGGCAGTTGTAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCt > 1:396344/1‑151 (MQ=255)
gCGAGGCAGTTGTAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCtgt < 1:485311/151‑1 (MQ=255)
gCGAGGCAGTTGTAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCtgt > 2:47950/1‑151 (MQ=255)
gTTGTAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATg < 1:253059/151‑1 (MQ=255)
tAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGcac > 2:248468/1‑151 (MQ=255)
aaTGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGcaca < 1:1319533/151‑1 (MQ=255)
aaTGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGcac < 1:724931/150‑1 (MQ=255)
gATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCt < 1:105802/151‑1 (MQ=255)
aTAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCta < 2:41592/151‑1 (MQ=255)
cAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATAttt < 2:263518/150‑1 (MQ=255)
aGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCCTATACACACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGATGATGGCAAAGCTATATTTc > 2:401477/1‑150 (MQ=255)
aGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTct > 2:576246/1‑151 (MQ=255)
aGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTct > 2:391551/1‑151 (MQ=255)
ggATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTctacta < 1:449286/151‑1 (MQ=255)
ggATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTctacta < 2:830732/151‑1 (MQ=255)
gATTATGCAAGGCTTCGAAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTAt > 2:185335/1‑151 (MQ=255)
ttATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACCGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTc > 2:1000471/1‑151 (MQ=255)
tATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTc < 1:382874/150‑1 (MQ=255)
aTGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCg > 1:431627/1‑151 (MQ=255)
aTGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCg > 2:821127/1‑151 (MQ=255)
cAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCa > 1:348646/1‑150 (MQ=255)
aaGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCaat < 1:471773/151‑1 (MQ=255)
aGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCaatg > 1:557270/1‑151 (MQ=255)
cGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCg < 1:550558/151‑1 (MQ=255)
gTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCgg < 1:1208174/151‑1 (MQ=255)
gTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCgg > 2:1142178/1‑151 (MQ=255)
gTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCg < 2:1211015/150‑1 (MQ=255)
ggAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTa > 1:1022803/1‑149 (MQ=255)
ggAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAg < 1:660802/151‑1 (MQ=255)
aaCGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTa < 2:396290/151‑1 (MQ=255)
gCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAg < 1:538001/151‑1 (MQ=255)
atatACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGc > 1:1043998/1‑150 (MQ=255)
atatACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCa < 1:725665/151‑1 (MQ=255)
ataCCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCAtt > 2:1052755/1‑151 (MQ=255)
ataCCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCAtt < 1:676513/151‑1 (MQ=255)
ataCCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCAtt < 2:1285477/151‑1 (MQ=255)
cccACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCAttgtt > 2:452311/1‑151 (MQ=255)
cccACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCAttgtt < 2:1141200/151‑1 (MQ=255)
cccACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCAttgtt > 2:572639/1‑151 (MQ=255)
aCTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCATTGTTGc > 2:1089874/1‑150 (MQ=255)
cTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCATTGTTGCa > 2:61736/1‑150 (MQ=255)
ttCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCATTGTTGCAAt > 2:1393534/1‑151 (MQ=255)
gtgCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCATTGTTGCAATCTTc > 1:808865/1‑151 (MQ=255)
gCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCATTGTTGCAATCTTCa < 1:733348/150‑1 (MQ=255)
gCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCATTGTTGCAATCTTCAt < 2:1090294/151‑1 (MQ=255)
gCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCATTGTTGCAATCTTCAt > 1:726693/1‑151 (MQ=255)
tACTGTTGAGCTGAAAACCTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCATTGTTGCAATCTTCATAc > 1:553613/1‑150 (MQ=255)
aCTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCATTGTTGCAATCTTCATACa < 2:996187/150‑1 (MQ=255)
aCTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCATTGTTGCAATCTTCATACa < 1:859327/150‑1 (MQ=255)
cTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCATTGTTGCAATCTTCATACAAt > 1:192906/1‑151 (MQ=255)
tGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCATTGTTGCAATCTTCATACAAtt > 1:1243362/1‑151 (MQ=255)
gTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCATTGTTGCAATCTTCATACAATTa < 2:1464575/151‑1 (MQ=255)
gTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCATTGTTGCAATCTTCATACAATTa < 1:1451636/151‑1 (MQ=255)
tGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCATTGTTGCAATCTTCATACAATTAcc > 2:1294263/1‑151 (MQ=255)
tGAGCTGAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCATTGTTGCAATCTTCATACAATTAc < 2:1434163/150‑1 (MQ=255)
gAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCATTGTTGCAATCTTCATACAATTACCAGGAAc < 2:820539/151‑1 (MQ=255)
gAAAAACTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCATTGTTGCAATCTTCATACAATTACCAGGAAc < 2:1163527/151‑1 (MQ=255)
gaaaCTGACGACTTATGATAAAGTACAGCCAGCTTTGTTTCATATGATTCTGGGCCGGTGCCTGATGACACAGCAATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCATTGTTGCAATCTTCACACAATTACCAg > 2:71667/2‑145 (MQ=255)
aaaCTGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCATTGTTGCAATCTTCATACAATTACCAGGAAcgcg < 1:394556/151‑1 (MQ=255)
tGACGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCATTGTTGCAATCTTCATACAATTACCAGGAACGCGGCAt > 1:1375018/1‑151 (MQ=255)
cGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCATTGTTGCAATCTTCATACAATTACCAGGAACGCGGCATgcg > 1:329932/1‑151 (MQ=255)
cGAATTATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCATTGTTGCAATCTTCATACAATTACCAGGAACGCGGCATgcg < 2:697850/151‑1 (MQ=255)
tATGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCATTGTTGCAATCTTCATACAATTACCAGGAACGCGGCATGCGCACt < 2:905840/150‑1 (MQ=255)
aTGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCATTGTTGCAATCTTCATACAATTACCAGGAACGCGGCATGCGCACTGt > 2:1401859/1‑151 (MQ=255)
aTGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCATTGTTGCAATCTTCATACAATTACCAGGAACGCGGCATGCGCACTGt > 1:640706/1‑151 (MQ=255)
aTGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCATTGTTGCAATCTTCATACAATTACCAGGAACGCGGCATGCGCACTGt > 2:288085/1‑151 (MQ=255)
aTGATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCATTGTTGCAATCTTCATACAATTACCAGGAACGCGGCATGCGCACTGt > 2:1469329/1‑151 (MQ=255)
gATAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCATTGTTGCAATCTTCATACAATTACCAGGAACGCGGCATGCGCACTGTCg > 1:356876/1‑151 (MQ=255)
aTAACCTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCATTGTTGCAATCTTCATACAATTACCACGAACGCGGCATGCGCACTGTCGt < 2:284195/151‑1 (MQ=255)
aTAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTACGTCTACAGCATAGTTGCAATCTTCATACAATTACCAGGAACGCGGCATGCGCACTGACg > 2:1025272/1‑150 (MQ=255)
aTAAACTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCATTGTTGCAATCTTCATACAATTACCAGGAACGCGGCATGCGCACTGTCGt > 1:789586/1‑151 (MQ=255)
aaaCTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCATTGTTGCAATCTTCATACAATTACCAGGAACGCGGCATGCGCACTGTCGtat > 1:183537/1‑151 (MQ=255)
aCTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCATTGTTGCAATCTTCATACAATTACCAGGAACGCGGCATGCGCACTGTCGtatat < 1:1078392/151‑1 (MQ=255)
aCTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCATTGTTGCAATCTTCATACAATTACCAGGAACGCGGCATGCGCACTGTCGtatat > 1:473914/1‑151 (MQ=255)
cTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCATTGTTGCAATCTTCATACAATTACCAGGAACGCGGCATGCGCACTGTCGtatat > 2:663013/1‑150 (MQ=255)
cTCCAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCATTGTTGCAATCTTCATACAATTACCAGGAACGCGGCATGCGCACTGTCGtatat > 1:865196/1‑150 (MQ=255)
ccAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCATTGTTGCAATCTTCATACAATTACCAGGAACGCGGCATGCGCACTGTCGTATATACg > 1:798969/1‑151 (MQ=255)
cAGTCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCATTGTTGCAATCTTCATACAATTACCAGGAACGCGGCATGCGCACTGTCGTATATACgg < 1:1383862/151‑1 (MQ=255)
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CAGCAGTCATTTACCCGCTTATAACAAGCGAGGCAGTTGTAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGCCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCATTGTTGCAATCTTCATACAATTACCAGGAACGCGGCATGCGCACTGTCGTATATACGG > NC_000913/1293344‑1293638
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
