Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F50 I3 R1
|
160 |
117.2 |
4331776 |
85.4% |
3699336 |
149.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,541,618 |
C→T |
D325N (GAC→AAC) |
narZ ← |
nitrate reductase 2 (NRZ), alpha subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,541,618 | 0 | C | T | 100.0%
| 406.8
/ NA
| 110 | D325N (GAC→AAC) | narZ | nitrate reductase 2 (NRZ), alpha subunit |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (54/56); total (54/56) |
Only 100 of 110 total aligned reads displayed.
TGCGGATTGTTGCTTTCGCCCAGTCCATCCACCAGGTCAGATGCGCGGATCATGCGCCCGGGAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTCGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCGGTGCCAGCCACTGGTCGCACAATTTGGCCACTTCAGAGTAGTCAGGGGTAATGGCGATGGTTTT > NC_000913/1541473‑1541762
|
tGCGGATTGTTGCTTTCGCCCAGTCCATCCACCAGGTCAGATGCGCGGATCATGCGCCCGGGAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTgg > 4:123839/1‑151 (MQ=255)
gCGGATTGTTGCTTTCGCCCAGTCCATCCACCAGGTCAGATGCGCGGATCATGCGCCCGGGAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCTGTCGGTGCTAAAGTAGCTGCTggg > 2:603177/1‑151 (MQ=255)
gCGGATTGTTGCTTTCGCCCAGTCCATCCACCAGGTCAGATGCGCGGATCATGCGCCCGGGAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGGTAAAGTAGTTGCTggg > 4:465765/1‑151 (MQ=255)
cGGATTGTTGCTTTCGCCCAGTCCATCCACCAGGTCAGATGCGCGGATCATGCGCCCGGGAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGa < 2:1556539/151‑1 (MQ=255)
gATTGTTGCTTTCGCCCAGTCCATCCACCAGGTCAGATGCGCGGATCATGCGCCCGGGAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGAtt > 2:591634/1‑151 (MQ=255)
tgttgCTTTCGCCCAGTCCATCCACCAGGTCAGATGCGCGGATCATGCGCCCGGGAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTAt > 4:1406016/1‑150 (MQ=255)
tgttgCTTTCGCCCAGTCCATCCACCAGGTCAGATGCGCGGATCATGCGCCCGGGAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATc > 1:360185/1‑151 (MQ=255)
ttgCTTTCGCCCAGTCCATCCACCAGGTCAGATGCGCGGATCATGCGCCCGGGAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCg > 3:153266/1‑150 (MQ=255)
tgCTTTCGCCCAGTCCATCCACCAGGTCAGATGCGCGGATCATGCGCCCGGGAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCga < 2:418976/150‑1 (MQ=255)
gCTTTCGCCCAGTCCATCCACCAGGTCAGATGCGCGGATCATGCGCCCGGGAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCgag < 2:603115/150‑1 (MQ=255)
gCTTTCGCCCAGTCCATCCACCAGGTCAGATGCGCGGATCATGCGCCCGGGAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCg > 2:651349/1‑148 (MQ=255)
cTTTCGCCCAGTCCATCCACCAGGTCAGATGCGCGGATCATGCGCCCGGGAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCg > 3:439011/1‑147 (MQ=255)
ttCGCCCAGTCCATCCACCAGGTCAGATGCGCGGATCATGCGCCCGGGAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGAt < 2:590028/149‑1 (MQ=255)
ttCGCCCAGTCCATCCACCAGGTCAGATGCGCGGATCATGCGCCCGGGAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATg < 2:1221230/150‑1 (MQ=255)
cGCCCAGTCCATCCACCAGGTCAGATGCGCGGATCATGCGCCCGGGAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGaa < 4:145618/150‑1 (MQ=255)
cGCCCAGTCCATCCACCAGGTCAGATGCGCGGATCATGCGCCCGGGAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGaa < 4:1046080/150‑1 (MQ=255)
ccAGTCCATCCACCAGGTCAGATGCGCGGATCATGCGCCCGGGAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGAAGTTGCTGGGGTTATCGAGATGAAActc > 2:1208334/1‑151 (MQ=255)
cAGTCCATCCACCAGGTCAGATGCGCGGATCATGCGCCCGGGAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAActct > 4:165722/1‑151 (MQ=255)
cAGTCCATCCACCAGGTCAGATGCGCGGATCATGCGCCCGGGAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAActct < 2:209911/151‑1 (MQ=255)
aGTCCATCCACCAGGTCAGATGCGCGGATCATGCGCCCGGGAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCtt < 2:1146369/151‑1 (MQ=255)
ccatccaCCAGGTCAGATGCGCGGATCATGCGCCCGGGAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTa < 4:397418/151‑1 (MQ=255)
catccaCCAGGTCAGATGCGCGGATCATGCGCCCGGGAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTa > 3:364899/1‑150 (MQ=255)
atccaCCAGGTCAGATGCGCGGATCATGCGCCCGGGAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCCGTAGGTGATAAAGAAGTTGCTGGGGTTATCGAGATGAAACTCTTTTaa > 2:892925/1‑150 (MQ=255)
tccaCCAGGTCAGATGCGCGGATCATGCGCCCGGGAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGGAGTTGCTGGGATTATCGAGATGAAACTCTTTTaaa > 2:1682356/1‑150 (MQ=255)
ccaccaGGTCAGATGCGCGGATCATGCGCCCGGGAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTaaaa < 3:450990/150‑1 (MQ=255)
ccaccaGGTCAGATGCGCGGATCATGCGCCCGGGAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTaaaa > 4:1136224/1‑150 (MQ=255)
ccaccaGGTCAGATGCGCGGATCATGCGCCCGGGAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTaaaa < 3:178464/150‑1 (MQ=255)
ccaccaGGTCAGATGCGCGGATCATGCGCCCGGGAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAAt < 4:1224555/151‑1 (MQ=255)
accaGGTCAGATGCGCGGATCATGCGCCCGGGAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATca < 3:161259/151‑1 (MQ=255)
caGGTCAGATGCGCGGATCATGCGCCCGGGAACGTAGCTACAATCGTCGCGAGGCTCCAGAATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGGAGTTGATAAAGCAGGTTCTGGGATTCTCATGTAGAAAATCCTTTAAAAacac > 2:368388/1‑150 (MQ=255)
ggTCAGATGCGCGGATCATGCGCCCGGGAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATg < 4:494458/151‑1 (MQ=255)
aGATGCGCGGATCATGCGCCCGGGAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGccc < 3:178533/151‑1 (MQ=255)
aTGCGCGGATCATGCGCCCGGGAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCAt > 4:198220/1‑151 (MQ=255)
tGCGCGGATCATGCGCCCGGGAACGTAGCTACCATCGTCGCGAGGCTTCAGCATTACCAGCATCGGCATGTCGCTGTAGCGACGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCAt < 1:359962/150‑1 (MQ=255)
gcgcGGATCATGCGCCCGGGAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCAtt < 2:1464097/150‑1 (MQ=255)
gcgcGGATCATGCGCCCGGGAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCAtt < 4:1556005/150‑1 (MQ=255)
gcgcGGATCATGCGCCCGGGAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTg < 3:397549/151‑1 (MQ=255)
gcgGATCATGCGCCCGGGAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGcc > 2:58753/1‑151 (MQ=255)
gcgGATCATGCGCCCGGGAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGcc < 4:234829/151‑1 (MQ=255)
gATCATGCGCCCGGGAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTTAAATCACATGGCCCATTGCCAt > 2:1255286/1‑150 (MQ=255)
aTCATGCGCCCGGGAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCg < 2:767511/151‑1 (MQ=255)
aTCATGCGCCCGGGAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCg < 3:50563/151‑1 (MQ=255)
cATGCGCCCGGGAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGcc > 2:1036938/1‑151 (MQ=255)
tGCGCCCGGGAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGGAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGcc > 4:1198908/1‑149 (MQ=255)
gcgcCCGGGAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAgg > 4:216567/1‑151 (MQ=255)
gcgcCCGGGAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAgg < 1:446950/151‑1 (MQ=255)
cccGGGAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAGCTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGgc < 2:223444/150‑1 (MQ=255)
ccGGGAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGgcg > 4:1122911/1‑150 (MQ=255)
gAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTAt > 1:353436/1‑150 (MQ=255)
cATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGttt > 3:121807/1‑151 (MQ=255)
aTCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGttt > 1:175767/1‑150 (MQ=255)
tcgtcgCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCg > 2:656281/1‑151 (MQ=255)
cgtcgCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCg < 3:474392/150‑1 (MQ=255)
cgtcgCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCg < 2:389329/150‑1 (MQ=255)
gtcgCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCgg > 3:50278/1‑150 (MQ=255)
gtcgCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCGGt < 2:1470641/151‑1 (MQ=255)
tcgCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCGGTg > 1:321829/1‑151 (MQ=255)
gcgAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCGGTgcc > 2:823828/1‑151 (MQ=255)
tgAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCGGTgcc > 2:481805/2‑150 (MQ=255)
aGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCGGTgccagc < 1:50274/151‑1 (MQ=255)
ggCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCGGTgccagcc < 2:165444/151‑1 (MQ=255)
tCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCCGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCATTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCGGGGGCAGCCACt > 2:1420956/1‑151 (MQ=255)
gCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCGGTGCCAGCCACTGGTc < 4:592455/151‑1 (MQ=255)
cATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGGTGAAACTCTTTTAAAATCACATGGCCCATTGCCCTCGCCAGGGCGCTATCAGTGCCTTGTTTCGGTGCCAGCCACTgg > 2:755454/1‑148 (MQ=255)
aTTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCGGTGCCAGCCACTGGTCGc < 2:1197387/151‑1 (MQ=255)
aCCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGGAGTTGCTGGGATTATCGAGATGAAACTCTTTTTAAATCACATGGCCCCTTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCGGTGCCAGCCACTGGTCGca > 2:937521/1‑149 (MQ=255)
cAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCGGTGCCAGCCACTGGTCGCACAAt < 3:441588/151‑1 (MQ=255)
aGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCGGTGCCAGCCACTGGTCGCACAAtt < 4:163580/151‑1 (MQ=255)
aGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGGTGATAAAGTAGGTGCTGGGATTATCGAGATGAAACTCTTTTTAAATCACATGGCCCCATGCCATCCCCAGGGCGCTATCAGTGGCTTGTTTCGGTGGCAGCCACTGGTCGCACAAtt > 2:1428504/1‑151 (MQ=255)
aTCGGCATGTCGCTGTAGCGGCGGCAGGAGGTGGTAAAGTAGTTGCTGGGGTTATCGAGGTGAAAATCTTTTTAAAACACATGGCCCCTTGCCATCGCCCGGGCGCTATCAGTGCCTTTTTTTGGTGGCAGCCCCTGGGCGCACAAttttg > 4:188335/1‑149 (MQ=255)
tCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCGGTGCCAGCCACTGGTCGCACAATTTGGc > 2:1484829/1‑151 (MQ=255)
cGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCGGTGCCAGCCACTGGTCGCACAATTTGGcc < 3:333829/151‑1 (MQ=255)
gCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCGGTGCCAGCCACTGGTCGCACAATTTGGCCAc < 4:1144832/151‑1 (MQ=255)
aTGTCGCTGTAGCGGCGGCCGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCCCCAGGGCGCTATCAGTGCCTTGTTTCGGTGCCAGCCACTGGTCGCACCATTTGGCCACtt > 4:874709/1‑151 (MQ=255)
aTGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCGGTGCCAGCCACTGGTCGCACAATTTGGCCACtt < 1:449080/151‑1 (MQ=255)
aTGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCGGTGCCAGCCACTGGTCGCACAATTTGGCCACtt < 1:62923/151‑1 (MQ=255)
gTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCGGTGCCAGCCACTGGTCGCACAATTTGGCCACTTc < 4:1037186/150‑1 (MQ=255)
gTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCGGTGCCAGCCACTGGTCGCACAATTTGGCCACTTCa < 2:1134779/151‑1 (MQ=255)
tCGCTGTAGCGGCGGCAGTAGTTGATAAAGGAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCGGTGCCAGCCACTGGTCGCACAATTTGGCCACtt > 1:71322/1‑148 (MQ=255)
gCTGTAGCGGCGGCAGGAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCGGTGCCAGCCACTGGTCGCACAATTTGGCCACTTCag > 2:1441725/1‑149 (MQ=255)
gTAGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCGGTGCCAGCCACTGGTCGCACAATTTGGCCACTTCAGagta < 4:429742/150‑1 (MQ=255)
aGCGGCGGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCGGTGCCAGCCACTGGTCGCACAATTTGGCCACTTCAGAGTAGTc < 4:1209851/151‑1 (MQ=255)
gcggcgGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCGGTGCCAGCCACTGGTCGCACAATTTGGCCACTTCAGAGTAGTc > 4:711458/1‑150 (MQ=255)
gcggcgGCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCGGTGCCAGCCACTGGTCGCACAATTTGGCCACTTCAGAGTAGTCa < 2:205364/151‑1 (MQ=255)
cggcggCAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCGGTGCCAGCCACTGGTCGCACAATTTGGCCACTTCAGAGTAGTCAg < 2:399368/151‑1 (MQ=255)
ggcggcAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCGGTGCCAGCCACTGGTCGCACAATTTGGCCACTTCAGAGTAGTCAgg < 2:465114/151‑1 (MQ=255)
tggcAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCGGTGCCAGCCACTGGTCGCACAATTTGGCCACTTCAGAGTAGTCAgggg > 2:1214321/2‑151 (MQ=255)
cggcAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCGGTGCCAGCCACTGGTCGCACAATTTGGCCACTTCAGAGTAGTCAgggg > 2:1630291/1‑151 (MQ=255)
cggcAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCGGTGCCAGCCACTGGTCGCACAATTTGGCCACTTCAGAGTAGTCAgggg > 3:368531/1‑151 (MQ=255)
ggcAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCGGTGCCAGCCACTGGTCGCACAATTTGGCCACTTCAGAGTAGTCAGGGGt > 4:792876/1‑151 (MQ=255)
gcAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCGGTGCCAGCCACTGGTCGCACAATTTGGCCACTTCAGAGTAGTCAGGGGTa < 2:256364/151‑1 (MQ=255)
cAGTAGTTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCGGTGCCAGCCACTGGTCGCACAATTTGGCCACTTCAGAGTAGTCAGGGGTaa < 4:725496/151‑1 (MQ=255)
agtagtTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCGGTGCCAGCCACTGGTCGCACAATTTGGCCACTTCAGAGTAGTCAGGGGTAAt > 2:558596/1‑151 (MQ=255)
agtTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCGGTGCCAGCCACTGGTCGCACAATTTGGCCACTTCAGAGTAGTCAGGGGTAATgg < 2:710505/150‑1 (MQ=255)
agtTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCGGTGCCAGCCACTGGTCGCACAATTTGGCCACTTCAGAGTAGTCAGGGGTAATGGc > 4:840212/1‑151 (MQ=255)
gtTGATAAAGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCGGTGCCAGCCACTGGTCGCACAATTTGGCCACTTCAGAGTAGTCAGGGGTAATGGCg < 4:248476/151‑1 (MQ=255)
aaaGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCGGTGCCAGCCACTGGTCGCACAATTTGGCCACTTCAGAGTAGTCAGGGGTAATGGCGATGGtt < 2:1284264/151‑1 (MQ=255)
aaGTAGTTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCGGTGCCAGCCACTGGTCGCACAATTTGGCCACTTCAGAGTAGTCAGGGGTAATGGCGATGGttt > 2:997925/1‑151 (MQ=255)
agtagtTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCGGTGCCAGCCACTGGTCGCACAATTTGGCCACTTCAGAGTAGTCAGGGGTAATGGCGATGGtttt > 1:375862/1‑151 (MQ=255)
gtagtTGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCGGTGCCAGCCACTGGTCGCACAATTTGGCCACTTCAGAGTAGTCAGGGGTAATGGCGATGGtttt > 4:110545/1‑150 (MQ=255)
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TGCGGATTGTTGCTTTCGCCCAGTCCATCCACCAGGTCAGATGCGCGGATCATGCGCCCGGGAACGTAGCTACCATCGTCGCGAGGCTCCAGCATTACCAGCATCGGCATGTCGCTGTAGCGGCGGCAGTAGTTGATAAAGTAGTCGCTGGGATTATCGAGATGAAACTCTTTTAAAATCACATGGCCCATTGCCATCGCCAGGGCGCTATCAGTGCCTTGTTTCGGTGCCAGCCACTGGTCGCACAATTTGGCCACTTCAGAGTAGTCAGGGGTAATGGCGATGGTTTT > NC_000913/1541473‑1541762
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
