Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A8 F50 I3 R1 168 141.0 4346284 99.6% 4328898 150.4

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,178,383 C→T R61H (CGT→CAT)  fbaB ← fructose‑bisphosphate aldolase class I

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,178,3830CT100.0% 562.0 / NA 137R61H (CGT→CAT) fbaBfructose‑bisphosphate aldolase class I
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (78/59);  total (78/59)

Only 100 of 137 total aligned reads displayed.

GCCACACAGTTACAGCCCGCTTCGATCGCCAGTTCAACAATGTTTTTCGGGTCAAAGTAGAGCGGGTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGACGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCG  >  NC_000913/2178236‑2178529
                                                                                                                                                   |                                                                                                                                                  
gCCACACAGTTACAGCCCGCTTCGATCGCCAGTTCAACAATGTTTTTCGGGTCAAAGTAGAGCGGGTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGcc                                                                                                                                                 <  1:1218054/151‑1 (MQ=255)
  cacacaGTTACAGCCCGCTTCGATCGCCAGTTCAACAATGTTTTTCGGGTCAAAGTAGAGCGGGTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCg                                                                                                                                               >  1:696445/1‑151 (MQ=255)
   acacaGTTACAGCCCGCTTCGATCGCCAGTTCAACAATGTTTTTCGGGTCAAAGTAGAGCGGGTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCgg                                                                                                                                              >  2:124153/1‑151 (MQ=255)
    cacaGTTACAGCCCGCTTCGATCGCCAGTTCAACAATGTTTTTCGGGTCAAAGTAGAGCGGGTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCgg                                                                                                                                              >  2:1327438/1‑150 (MQ=255)
      caGTTACAGCCCGCTTCGATCGCCAGTTCAACAATGTTTTTCGGGTCAAAGTAGAGCGGGTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGgtgt                                                                                                                                           >  2:862217/1‑151 (MQ=255)
       aGTTACAGCCCGCTTCGATCGCCAGTTCAACAATGTTTTTCGGGTCAAAGTAGAGCGGGTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGtgtt                                                                                                                                          <  1:450195/151‑1 (MQ=255)
          tACAGCCCGCTTCGATCGCCAGTTCAACAATGTTTTTCGGGTCAAAGTAGAGCGGGTTAGCAGCAAATGAAGCCCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGtgttgt                                                                                                                                        <  1:1990097/150‑1 (MQ=255)
            cAGCCCGCTTCGATCGCCAGTTCAACAATGTTTTTCGGGTCAAAGTAGAGCGGGTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTAc                                                                                                                                      >  1:1146124/1‑150 (MQ=255)
             aGCCCGCTTCGATCGCCAGTTCAACAATGTTTTTCGGGTCAAAGTAGAGCGGGTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACa                                                                                                                                     >  1:524776/1‑150 (MQ=255)
             aGCCCGCTTCGATCGCCAGTTCAACAATGTTTTTCGGGTCAAAGTAGAGCGGGTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGCGTTGTACa                                                                                                                                     >  2:1564432/1‑150 (MQ=255)
               cccGCTTCGATCGCCAGTTCAACAATGTTTTTCGGGTCAAAGTAGAGCGGGTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACg                                                                                                                                  >  2:70641/1‑151 (MQ=255)
               cccGCTTCGATCGCCAGTTCAACAATGTTTTTCGGGTCAAAGTAGAGCGGGTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACg                                                                                                                                  >  2:376016/1‑151 (MQ=255)
                ccGCTTCGATCGCCAGTTCAACAATGTTTTTCGGGTCAAAGTAGAGCGGGTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGt                                                                                                                                 <  1:804006/151‑1 (MQ=255)
                ccGCTTCGATCGCCAGTTCAACAATGTTTTTCGGGTCAAAGTAGAGCGGGTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGt                                                                                                                                 >  1:989911/1‑151 (MQ=255)
                    ttCGATCGCCAGTTCAACAATGTTTTTCGGGTCAAAGTAGAGCGGGTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGc                                                                                                                             >  1:1922592/1‑151 (MQ=255)
                     tCGATCGCCAGTTCAACAATGTTTTTCGGGTCAAAGTAGAGCGGGTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGc                                                                                                                             >  2:896557/1‑150 (MQ=255)
                      cGATCGCCAGTTCAACAATGTTTTTCGGGTCAAAGTAGAGCGGGTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCat                                                                                                                           <  2:1879224/151‑1 (MQ=255)
                       gATCGCCAGTTCAACAATGTTTTTCGGGTCAAAGTAGAGCGGGTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCat                                                                                                                           >  1:1744914/1‑150 (MQ=255)
                           gCCAGTTCAACAATGTTTTTCGGGTCAAAGTAGAGCGGGTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTAc                                                                                                                      >  1:399857/1‑151 (MQ=255)
                            ccAGTTCAACAATGTTTTTCGGGTCAAAGTAGAGCGGGTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACg                                                                                                                     >  1:1786345/1‑151 (MQ=255)
                              aGTTCAACAATGTTTTTCGGGTCAAAGTAGAGCGGGTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTa                                                                                                                   <  2:271998/151‑1 (MQ=255)
                               gTTCAACAATGTTTTTCGGGTCAAAGTAGAGCGGGTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTa                                                                                                                   >  2:1814184/1‑150 (MQ=255)
                                ttCAACAATGTTTTTCGGGTCAAAGTAGAGCGGGTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAac                                                                                                                 >  2:97150/1‑151 (MQ=255)
                                ttCAACAATGTTTTTCGGGTCAAAGTAGAGCGGGTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAac                                                                                                                 >  2:972278/1‑151 (MQ=255)
                                  caacaaTGTTTTTCGGGTCAAAGTAGAGCGGGTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAacac                                                                                                               >  2:2118849/1‑151 (MQ=255)
                                  caacaaTGTTTTTCGGGTCAAAGTAGAGCGGGTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAacac                                                                                                               >  2:270452/1‑151 (MQ=255)
                                  caacaaTGTTTTTCGGGTCAAAGTAGAGCGGGTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAaca                                                                                                                <  1:1213264/150‑1 (MQ=255)
                                     caaTGTTTTTCGGGTCAAAGTAGAGCGGGTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGc                                                                                                            <  1:469249/151‑1 (MQ=255)
                                     caaTGTTTTTCGGGTCAAAGTAGAGCGGGTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGc                                                                                                            <  1:868143/151‑1 (MQ=255)
                                      aaTGTTTTTCGGGTCAAAGTAGAGCGGGTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCt                                                                                                           >  1:1773820/1‑151 (MQ=255)
                                       aTGTTTTTCGGGTCAAAGTAGAGCGGGTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTg                                                                                                          <  2:1856332/151‑1 (MQ=255)
                                         gTTTTTCGGGTCAAAGTAGAGCGGGTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAAGCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTggc                                                                                                        >  2:1493094/1‑151 (MQ=255)
                                             ttCGGGTCAAAGTAGAGCGGGTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTggcgggc                                                                                                    >  2:799633/1‑151 (MQ=255)
                                              tCGGGTCAAAGTAGAGCGGGTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTggcgggc                                                                                                    <  1:560506/150‑1 (MQ=255)
                                               cGGGTCAAAGTAGAGCGGGTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTggcgggcg                                                                                                   <  1:834213/150‑1 (MQ=255)
                                                gggTCAAAGTAGAGCGGGTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGat                                                                                                 <  1:129721/151‑1 (MQ=255)
                                                    cAAAGTAGAGCGGGTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGattat                                                                                              <  1:2037635/150‑1 (MQ=255)
                                                     aaaGTAGAGCGGGTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTg                                                                                            >  1:1720759/1‑151 (MQ=255)
                                                     aaaGTAGAGCGGGTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTg                                                                                            >  2:683529/1‑151 (MQ=255)
                                                      aaGTAGAGCGGGTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGt                                                                                           >  1:1422618/1‑151 (MQ=255)
                                                       aGTAGAGCGGGTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGt                                                                                           >  1:927201/1‑150 (MQ=255)
                                                       aGTAGAGCGGGTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTc                                                                                          <  1:717739/151‑1 (MQ=255)
                                                       aGTAGAGCGGGTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTc                                                                                          >  2:2087994/1‑151 (MQ=255)
                                                        gTAGAGCGGGTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTc                                                                                          >  1:903503/1‑150 (MQ=255)
                                                         tAGAGCGGGTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCa                                                                                         >  1:1743477/1‑150 (MQ=255)
                                                          agagCGGGTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCaa                                                                                        <  2:641307/150‑1 (MQ=255)
                                                             gCGGGTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCAt                                                                                    <  2:2043310/151‑1 (MQ=255)
                                                               gggTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCAtt                                                                                   >  1:403961/1‑150 (MQ=255)
                                                                  ttAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTAcgc                                                                               >  2:1123111/1‑151 (MQ=255)
                                                                   tAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTAcgcg                                                                              >  1:426481/1‑151 (MQ=255)
                                                                   tAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTAcacg                                                                              >  2:1196054/1‑151 (MQ=255)
                                                                        gcaAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCt                                                                          >  2:1753087/1‑150 (MQ=255)
                                                                         caAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTAc                                                                        <  2:1260598/151‑1 (MQ=255)
                                                                          aaaTGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACg                                                                       >  2:1989556/1‑151 (MQ=255)
                                                                           aaTGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGt                                                                      <  1:1297352/151‑1 (MQ=255)
                                                                            aTGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGt                                                                      >  1:557377/1‑150 (MQ=255)
                                                                            aTGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTa                                                                     <  1:538134/151‑1 (MQ=255)
                                                                            aTGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTa                                                                     <  2:1476721/151‑1 (MQ=255)
                                                                              gAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGt                                                                   <  1:1126038/151‑1 (MQ=255)
                                                                                 gCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCAt                                                                <  1:1851995/151‑1 (MQ=255)
                                                                                    ccGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTc                                                             <  2:1005305/151‑1 (MQ=255)
                                                                                     cGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGt                                                              <  2:171674/149‑1 (MQ=255)
                                                                                      ggCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCg                                                           >  2:1952186/1‑151 (MQ=255)
                                                                                      ggCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCg                                                           >  2:815783/1‑151 (MQ=255)
                                                                                          gagTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGga                                                       <  1:494526/151‑1 (MQ=255)
                                                                                           agTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCgggg                                                        >  2:537575/1‑149 (MQ=255)
                                                                                           agTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGgag                                                      <  1:2033159/151‑1 (MQ=255)
                                                                                            gTGCTCAACGCCCTGGTCAACCGGCAGAATAGAACGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGACTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCggggcg                                                      >  2:687039/1‑148 (MQ=255)
                                                                                              gCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGAt                                                    <  1:1347806/150‑1 (MQ=255)
                                                                                              gCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATa                                                   <  2:914277/151‑1 (MQ=255)
                                                                                                     gCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTgg                                            >  1:1989472/1‑151 (MQ=255)
                                                                                                      cccTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGt                                           >  1:812841/1‑151 (MQ=255)
                                                                                                      cccTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGt                                           <  1:1522155/151‑1 (MQ=255)
                                                                                                         tGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTc                                          >  1:1156163/1‑149 (MQ=255)
                                                                                                            tCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGa                                       >  2:1708508/1‑149 (MQ=255)
                                                                                                             cAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAgg                                    >  1:833579/1‑151 (MQ=255)
                                                                                                             cAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAgg                                    >  2:640819/1‑151 (MQ=255)
                                                                                                              aaCCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGa                                   <  2:1767303/151‑1 (MQ=255)
                                                                                                                ccGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAAt                                 <  1:525651/151‑1 (MQ=255)
                                                                                                                 cGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAAtt                                <  1:1897103/151‑1 (MQ=255)
                                                                                                                 cGGCAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAAtt                                >  2:487276/1‑151 (MQ=255)
                                                                                                                    cAGAATAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTc                             >  2:1113556/1‑151 (MQ=255)
                                                                                                                       aaTAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATa                          <  2:1312067/151‑1 (MQ=255)
                                                                                                                       aaTAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGT‑CGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATAc                         >  1:218976/1‑151 (MQ=255)
                                                                                                                        aTAGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATAc                         <  1:1327461/151‑1 (MQ=255)
                                                                                                                          aGAAAGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACa                        <  2:1045884/150‑1 (MQ=255)
                                                                                                                             aaGATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACgg                    >  1:294169/1‑151 (MQ=255)
                                                                                                                               gATATCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTg                  >  1:1242529/1‑151 (MQ=255)
                                                                                                                                 tatCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCt                >  2:295268/1‑151 (MQ=255)
                                                                                                                                  atCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTg               <  1:676351/151‑1 (MQ=255)
                                                                                                                                  atCCTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTg               <  2:81606/151‑1 (MQ=255)
                                                                                                                                    ccTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGt              <  2:2121891/150‑1 (MQ=255)
                                                                                                                                    ccTGTGCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTa             <  2:1018046/151‑1 (MQ=255)
                                                                                                                                        tgCCAGCCAGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTaaa           >  2:421100/1‑149 (MQ=255)
                                                                                                                                         gccagccaGATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAgg        <  1:1990255/151‑1 (MQ=255)
                                                                                                                                          ccagccagATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGt       <  1:1458886/151‑1 (MQ=255)
                                                                                                                                           cagccagATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGtt      >  2:1383353/1‑151 (MQ=255)
                                                                                                                                            agccagATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTg     >  1:2040003/1‑151 (MQ=255)
                                                                                                                                            agccagATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTg     <  1:107757/151‑1 (MQ=255)
                                                                                                                                            agccagATGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTg     >  2:465370/1‑151 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
GCCACACAGTTACAGCCCGCTTCGATCGCCAGTTCAACAATGTTTTTCGGGTCAAAGTAGAGCGGGTTAGCAGCAAATGAAGCTCCGGCAGAGTGCTCAACGCCCTGGTCAACCGGCAGAATAGAAAGATATCCTGTGCCAGCCAGACGCCCGGTGTTGTACAACGTCTGCATATTACGTAACACCGCTGGCGGGCGATTATTGTCAATCATTACGCGGTCTACGTAGTCATGTCCGGGGAGATAAAGCTGGTCAGAAGGAATTGTCATACAACGGTGCTGTAAAAGGTTGTCG  >  NC_000913/2178236‑2178529

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A