Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F50 I3 R1
|
143 |
109.6 |
3434427 |
98.5% |
3382910 |
150.4 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,967,290 |
C→T |
G50S (GGT→AGT) |
cheY ← |
chemotaxis regulator transmitting signal to flagellar motor component |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,967,290 | 0 | C | T | 98.1%
| 399.8
/ ‑2.2
| 105 | G50S (GGT→AGT) | cheY | chemotaxis regulator transmitting signal to flagellar motor component |
| Reads supporting (aligned to +/- strand): ref base C (1/1); new base T (51/52); total (52/53) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.75e-01 |
Only 100 of 105 total aligned reads displayed.
GCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACCGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCAAAAATTTAAGTTCTTTATCCGCCAT > NC_000913/1967142‑1967437
|
gccgcAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTgc < 1:1048587/151‑1 (MQ=255)
cgcAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTgcct > 1:1100891/1‑151 (MQ=255)
cgcAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTgcc > 2:1135518/1‑150 (MQ=255)
gcagcaATGATGTTCTCTTTCTTCGCTTCTGCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTgcctg > 1:997333/1‑151 (MQ=255)
gcaATGATGTTCTCTTTCTTCGCTTCTGCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTgcctgcct > 2:889785/1‑151 (MQ=255)
gcaATGATGTTCTCTTTCTTCGCTTCTGCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTgcctgcct > 1:1080611/1‑151 (MQ=255)
caATGATGTTCTCTTTCTTCGCTTCTGCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGcctgcctg > 2:732855/1‑151 (MQ=255)
gTTCTCTTTCTTCGCTTCTGCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACtt > 1:1252049/1‑150 (MQ=255)
ttCTCTTTCTTCGCTTCTGCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTAt > 2:746261/1‑151 (MQ=255)
tttcttCGCTTCTGCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTg > 1:61690/1‑148 (MQ=255)
ttcttcGCTTCTGCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTgag < 2:718072/149‑1 (MQ=255)
ttcGCTTCTGCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGt > 2:739350/1‑151 (MQ=255)
gCTTCTGCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTgcc < 2:1380374/125‑1 (MQ=255)
gCTTCTGCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTgcc > 1:1380280/1‑125 (MQ=255)
ttCTGCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACg > 2:310412/1‑151 (MQ=255)
tGCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGcc > 2:202600/1‑150 (MQ=255)
gCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCa < 1:1410760/150‑1 (MQ=255)
cAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGc < 2:1062960/147‑1 (MQ=255)
cACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTcc > 2:845890/1‑151 (MQ=255)
cACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTcc > 1:63546/1‑151 (MQ=255)
cACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTcc < 2:1222838/151‑1 (MQ=255)
aCCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCg > 2:731969/1‑151 (MQ=255)
aTTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCtt < 2:1385815/151‑1 (MQ=255)
aTTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCtt > 2:1624931/1‑151 (MQ=255)
aTTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCtt > 1:1219418/1‑151 (MQ=255)
acacTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTc > 1:203907/1‑151 (MQ=255)
acacTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTc > 2:1356183/1‑151 (MQ=255)
acTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCa > 1:1594552/1‑150 (MQ=255)
cTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAAc > 2:1653856/1‑151 (MQ=255)
ggCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACat < 2:425744/151‑1 (MQ=255)
cAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACatt > 1:1314239/1‑150 (MQ=255)
aaTGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACattat > 1:1068004/1‑151 (MQ=255)
aaTGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACattat < 1:494776/151‑1 (MQ=255)
aTGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACattatt > 1:544019/1‑151 (MQ=255)
aTGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACattatt < 2:170175/151‑1 (MQ=255)
aTGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACattatt > 2:386677/1‑151 (MQ=255)
ccGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGaa < 2:1291975/151‑1 (MQ=255)
cGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAAt < 1:507697/151‑1 (MQ=255)
cGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAAt < 2:1252146/151‑1 (MQ=255)
gACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATc > 2:513700/1‑151 (MQ=255)
gACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATc < 1:455054/151‑1 (MQ=255)
gACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATc > 2:361592/1‑151 (MQ=255)
aCATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACCGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATcc > 1:1172123/1‑151 (MQ=255)
cATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATccc > 2:78967/1‑151 (MQ=255)
aTCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATccc > 1:693470/1‑150 (MQ=255)
aTCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCa < 1:429568/151‑1 (MQ=255)
gcgcCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGct < 2:589638/151‑1 (MQ=255)
gcCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGctct > 1:247043/1‑151 (MQ=255)
gcCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGctct < 2:362427/151‑1 (MQ=255)
cATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCttt > 2:90975/1‑151 (MQ=255)
aTCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTc < 2:1270411/151‑1 (MQ=255)
cACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTcagc > 2:651058/1‑149 (MQ=255)
cACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTcagc > 2:260284/1‑149 (MQ=255)
aCGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAgg < 1:716678/151‑1 (MQ=255)
tGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGc > 2:1007139/1‑151 (MQ=255)
tGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGc > 2:518231/1‑151 (MQ=255)
aGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATg < 1:961745/150‑1 (MQ=255)
aGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGc < 2:853930/151‑1 (MQ=255)
aGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGc < 2:350442/151‑1 (MQ=255)
gCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCg < 2:1553914/151‑1 (MQ=255)
aaTTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTc < 1:1007882/151‑1 (MQ=255)
aaTTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTc < 2:1049826/151‑1 (MQ=255)
aaTTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTc > 1:327340/1‑151 (MQ=255)
aTTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCg > 2:378080/1‑151 (MQ=255)
cAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCAtg < 2:1717060/151‑1 (MQ=255)
cAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCAtg > 1:1375630/1‑151 (MQ=255)
aGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCAtgg > 2:914173/1‑151 (MQ=255)
ggCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCAtggt < 2:223178/151‑1 (MQ=255)
ccatccatATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCAtggtgg < 1:1621025/151‑1 (MQ=255)
catccatATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCAtggtgg > 2:895162/1‑150 (MQ=255)
catccatATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGa < 2:61694/151‑1 (MQ=255)
atccatATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGa > 2:1419132/1‑150 (MQ=255)
ccatATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGaaaa < 1:895094/151‑1 (MQ=255)
catATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAg < 1:538416/151‑1 (MQ=255)
catATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAg < 2:800692/151‑1 (MQ=255)
ttGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCAt > 2:1431206/1‑151 (MQ=255)
tGGGCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCAt < 1:672130/150‑1 (MQ=255)
gCATGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCcac < 1:1634845/151‑1 (MQ=255)
aTGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCcaca > 2:1655420/1‑150 (MQ=255)
aTGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACaa < 2:72414/151‑1 (MQ=255)
aTGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACaa < 2:1063179/151‑1 (MQ=255)
tGTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAAc > 1:1035098/1‑151 (MQ=255)
gTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAAcc > 2:743835/1‑151 (MQ=255)
gTTCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAAc < 2:1579891/150‑1 (MQ=255)
tCCAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCa < 2:247065/150‑1 (MQ=255)
ccAGTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCaa > 2:211697/1‑150 (MQ=255)
gTCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCAAAAAt < 1:472367/151‑1 (MQ=255)
tCGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCAAAAAtt > 2:964299/1‑151 (MQ=255)
cGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCAAAAAttt < 1:141589/151‑1 (MQ=255)
cGGAGATAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCAAAAAtt < 1:409077/150‑1 (MQ=255)
gagaTAACAAACCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCAAAAATTTaa < 1:1135430/151‑1 (MQ=255)
gaTAACAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCAAAAATTTAAGt < 2:646214/151‑1 (MQ=255)
aCAATTCCATAGCCGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCAAAAATTTAAGTTCtt < 2:1172210/151‑1 (MQ=255)
aCAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCAAAAATTTAAGTTCtt < 2:1314334/151‑1 (MQ=255)
aCAAATCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCAAAAATTTAAGTTCtt > 2:111144/1‑151 (MQ=255)
aaaTCCATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCAAAAATTTAAGTTCttt > 1:489328/1‑150 (MQ=255)
ccATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCAAAAATTTAAGTTCTTTATcc < 2:203924/150‑1 (MQ=255)
ccATAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCAAAAATTTAAGTTCTTTATcc < 1:34076/150‑1 (MQ=255)
aTAACTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCAAAAATTTAAGTTCTTTATCCGcc < 1:889716/151‑1 (MQ=255)
aaCTGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCAAAAATTTAAGTTCTTTATCCGCCAt < 1:513648/151‑1 (MQ=255)
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GCCGCAGCAATGATGTTCTCTTTCTTCGCTTCTGCAGTCACCATTAACACTGGCAATGCCGACATCGCGCCATCCGCACGAATTGTTTTCAGCAATTCCAGGCCATCCATATTGGGCATGTTCCAGTCGGAGATAACAAATCCATAACCGCCTGCCTGCAACTTATTGAGAGCGTCGACGCCATCTTCCGCTTCCTCAACATTATTGAATCCCAGCTCTTTCAGCAGGTTACGCACTATGCGTCGCATGGTGGAAAAGTCATCCACAACCAAAAATTTAAGTTCTTTATCCGCCAT > NC_000913/1967142‑1967437
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
