Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F210 I1 R1 4928 385.2 6658600 97.5% 6492135 231.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 678,690 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583678,6900GC99.7% 897.7 / NA 374intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (187/185);  minor base T (0/1);  total (188/186)
Fisher's exact test for biased strand distribution p-value = 4.99e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583678,6910CG98.9% 866.4 / NA 374intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (3/1);  new base G (185/183);  total (188/186)
Fisher's exact test for biased strand distribution p-value = 6.23e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583678,6920TA99.2% 869.0 / NA 374intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (1/2);  new base A (186/180);  total (188/186)
Fisher's exact test for biased strand distribution p-value = 6.19e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 374 total aligned reads displayed.

AACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCGCTGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATAATGATGAGATCCGCTTCATTGATAGCGTGAACCGCCTCACGCGTTGCGGG  >  CP042583/678415‑678971
                                                                                                                                                                                                                                                                                   |||                                                                                                                                                                                                                                                                                        
      cTGATGCGCTACGCTTAGCCGGCCTACATTGTCTCCGCAATATATTGAAGTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGc                                                                                                                                                                                                                                                                         <  1:2552648/288‑1 (MQ=255)
            cgcTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCcgacg                                                                                                                                                                                                                                                                   <  2:2558020/288‑1 (MQ=255)
                      aTCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATTCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGCCGATGTCCGccta                                                                                                                                                                                                                                                        >  2:2458553/1‑286 (MQ=255)
                      aTCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGAc                                                                                                                                                                                                                                                              >  1:2897407/1‑283 (MQ=255)
                      aTCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATc                                                                                                                                                                                                                                                        >  1:1168708/1‑289 (MQ=255)
                           gCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGAc                                                                                                                                                                                                                                                              <  1:2794300/278‑1 (MQ=255)
                           gCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATg                                                                                                                                                                                                                                                    >  2:1286402/1‑288 (MQ=255)
                           gCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATg                                                                                                                                                                                                                                                    >  1:2137948/1‑288 (MQ=255)
                            ccTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCCCCCAGC‑CATCCACTTTTGGCCCGACGATGACCGCACCAATGa                                                                                                                                                                                                                                                   >  2:1252748/1‑288 (MQ=255)
                              tACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATACGGCATAAACAACGCGCACTTTGCCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACATACTGGATCACAATCCGCTCTTCCACCTCCGCGA‑CACTCACTTTTGCACCGACGATTACCGAATCAATGACCt                                                                                                                                                                                                                                                >  2:2288144/1‑289 (MQ=255)
                                cATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCttt                                                                                                                                                                                                                                              >  2:3318220/1‑289 (MQ=255)
                                cATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCttt                                                                                                                                                                                                                                              >  1:1107925/1‑289 (MQ=255)
                                cATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTACTGGATCACAATCCGCCCTTTCACCGC‑CTAACCATCAACTTTTGGCCCGACGATGACCGCACCAATGACCttt                                                                                                                                                                                                                                              >  2:535892/1‑289 (MQ=255)
                                 aTTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCtttt                                                                                                                                                                                                                                             <  1:75349/289‑1 (MQ=255)
                                 aTTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCtttt                                                                                                                                                                                                                                             <  1:1564544/289‑1 (MQ=255)
                                     tctcCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCtttt                                                                                                                                                                                                                                             <  1:824588/285‑1 (MQ=255)
                                     tctcCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCCCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATTCCCGCATCCATg                                                                                                                                                                                                                                                    >  2:2794300/1‑278 (MQ=255)
                                      ctcCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCa                                                                                                                                                                                                                                        <  1:2582744/289‑1 (MQ=255)
                                          gCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTAc                                                                                                                                                                                                                                          <  2:1155065/283‑1 (MQ=255)
                                          gCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACAt                                                                                                                                                                                                                                    >  2:289946/1‑289 (MQ=255)
                                            aaTATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAGTCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATa                                                                                                                                                                                                                                   <  1:3243466/288‑1 (MQ=255)
                                            aaTATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATa                                                                                                                                                                                                                                   <  2:2580686/288‑1 (MQ=255)
                                                   tGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGcc                                                                                                                                                                                                                                                                        <  1:313337/244‑1 (MQ=255)
                                                                  tGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAgctt                                                                                                                                                                                                              >  2:2316758/1‑287 (MQ=255)
                                                                          ggATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCtttt                                                                                                                                                                                                                                             >  1:1508289/1‑248 (MQ=255)
                                                                          ggATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTTCTTTCCa                                                                                                                                                                                                      >  2:1707117/1‑287 (MQ=255)
                                                                            aTAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCt                                                                                                                                                                                                   >  1:1836606/1‑288 (MQ=255)
                                                                                      cACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGc                                                                                                                                                                                         >  1:2816602/1‑288 (MQ=255)
                                                                                      cACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGc                                                                                                                                                                                         >  2:797358/1‑288 (MQ=255)
                                                                                           cgcATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAgg                                                                                                                                                                                   >  2:3194179/1‑289 (MQ=255)
                                                                                            gcATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCa                                                                                                                                                                                                                                        >  1:2228022/1‑235 (MQ=255)
                                                                                            gcATCCCGCATAAACAACGCGCACTTTGGCTTCAATAGTGAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAGGCCTGTAACGCCTTTTCCAGCGCGTGATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGt                                                                                                                                                                                  <  2:16328/289‑1 (MQ=255)
                                                                                                   gCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGAGGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCCCAGGTAaactca                                                                                                                                                                           >  2:864259/1‑289 (MQ=255)
                                                                                                        aacaacGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAactcaactca                                                                                                                                                                      <  1:430201/289‑1 (MQ=255)
                                                                                                              gcgcACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAAt                                                                                                                                                                                                                                                     >  2:2635386/1‑204 (MQ=255)
                                                                                                                    tttGTCTTCAATGGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACACCTTTTCCAGCGCGTTATGTAACAACGGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTg                                                                                                                                                          <  2:1980894/289‑1 (MQ=255)
                                                                                                                     ttGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGc                                                                                                                                                         <  2:2934817/289‑1 (MQ=255)
                                                                                                                                    aGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCg                                                                                                                                          >  2:2596635/1‑289 (MQ=255)
                                                                                                                                                    cGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCAGCTCTTTCACCGCCGAGA‑CATCCCCTTTTGGCCCGACGATGACCGCATCACTGCCCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCCAATTAGCCTCAGGTAAACTCAACTCACCCCCCAGCTTCCCGATTTAATCCATCGGCGCTGGCGTgcggcg                                                                                                                          >  2:1793293/1‑289 (MQ=255)
                                                                                                                                                                   cTAAAGCCTGTAACGCCTTTTCCAGCGCATTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATTATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTg                                                                                                                               <  1:2420635/269‑1 (MQ=255)
                                                                                                                                                                    tAAAGCCGATAACGCCTTTTCCAGCTCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGAtt                                                                                                          <  2:2711435/289‑1 (MQ=255)
                                                                                                                                                                       aGCCTGAAACGCCTTTTCCAGCACGTAATGTAACAACTGGCAGTCATGACGATACGGCATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTGACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTCTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTcc                                                                                                       <  2:2028581/289‑1 (MQ=255)
                                                                                                                                                                           tGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCTTCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTca                                                                                                   >  1:2368829/1‑289 (MQ=255)
                                                                                                                                                                           tGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTca                                                                                                   >  1:3164580/1‑289 (MQ=255)
                                                                                                                                                                             tAACGCCTTTTCCAGCGCGTTATGTAACACCTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAAt                                                                                                                                                                                                                                                     >  1:1127378/1‑141 (MQ=255)
                                                                                                                                                                             tAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACg                                                                                                                                                                    <  1:3303542/222‑1 (MQ=255)
                                                                                                                                                                             tAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCACCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCa                                                                                                                                                                                                                                        >  1:3181265/1‑154 (MQ=255)
                                                                                                                                                                               aCGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTcagcag                                                                                               <  2:1105433/289‑1 (MQ=255)
                                                                                                                                                                                   cTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATAACGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCAGCAATGACCTTTTTACCAACATACTGCTCCATACTTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCTATATAAACCATCGGACCTGGCGTTCTGCGTAACGCCTGGTCGAGTTCCTTcagcacaaga                                                                                           >  2:1448708/1‑284 (MQ=255)
                                                                                                                                                                                     tttCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTCCCGATATAAACCATCGGCGCGCGCGTGCGGCGTAATGACCGGCCGAGTTCCttacgcacaagaa                                                                                          >  2:3010339/1‑277 (MQ=255)
                                                                                                                                                                                             gcgTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCtttt                                                                                                                                                                                                                                             <  1:2604090/133‑1 (MQ=255)
                                                                                                                                                                                                 tctgtaccacatgtcGGTCTGGACGATACGGAATACCGCTTCGTTCCGGTACAACCTGAATCACAATCCGCTCTTTCAACGCCGGGA‑CATCCTCTGTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACGGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAACCCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCt                                                                             <  2:2816602/275‑1 (MQ=255)
                                                                                                                                                                                                     tAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGta                                                                         >  1:2643433/1‑289 (MQ=255)
                                                                                                                                                                                                        caacTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGCTGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATaa                                                                      >  1:1982504/1‑289 (MQ=255)
                                                                                                                                                                                                         aacTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTg                                                                                                                                                                                                                                <  2:711634/134‑1 (MQ=255)
                                                                                                                                                                                                           cTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATaaaa                                                                    >  1:2338167/1‑288 (MQ=255)
                                                                                                                                                                                                             ggCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCtttt                                                                                                                                                                                                                                             <  1:1076501/117‑1 (MQ=255)
                                                                                                                                                                                                             ggCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCAt                                                                                                                                            <  2:1120696/214‑1 (MQ=255)
                                                                                                                                                                                                             ggCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCgg                                                                                                                                         >  1:1776450/1‑217 (MQ=255)
                                                                                                                                                                                                             ggCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATaaaa                                                                    >  2:2689268/1‑286 (MQ=255)
                                                                                                                                                                                                             ggCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATaaaa                                                                    >  2:2131552/1‑286 (MQ=255)
                                                                                                                                                                                                              gCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACt                                                                 >  1:2301361/1‑288 (MQ=255)
                                                                                                                                                                                                                 ggcATGACGCTACTGAAAATCGCTGGCCTCCATTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGcc                                                              <  2:65950/286‑1 (MQ=255)
                                                                                                                                                                                                                           tACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGt                                                                                                                                                                                  >  2:3120447/1‑162 (MQ=255)
                                                                                                                                                                                                                           tACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCcaacaa                                                   >  2:393690/1‑289 (MQ=255)
                                                                                                                                                                                                                            aCGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTgc                                                                                                                              >  1:174180/1‑213 (MQ=255)
                                                                                                                                                                                                                            aCGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTg                                                                                                                               <  2:3163686/212‑1 (MQ=255)
                                                                                                                                                                                                                            aCGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCaataat                                                  >  1:3082682/1‑289 (MQ=255)
                                                                                                                                                                                                                             cGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCTTCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATAatg                                                 <  2:2368829/289‑1 (MQ=255)
                                                                                                                                                                                                                                    tCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATAATGATgaga                                           >  1:1266850/1‑288 (MQ=255)
                                                                                                                                                                                                                                     cGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCtt                                                                                                                                                                                                                                               <  1:2709465/91‑1 (MQ=255)
                                                                                                                                                                                                                                       cTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAaactcaact                                                                                                                                                                        >  1:2997672/1‑160 (MQ=255)
                                                                                                                                                                                                                                       cTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAaactcaact                                                                                                                                                                        <  2:2997672/160‑1 (MQ=255)
                                                                                                                                                                                                                                          gCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAaactcaact                                                                                                                                                                        <  2:1909262/157‑1 (MQ=255)
                                                                                                                                                                                                                                          gCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAaactcaact                                                                                                                                                                        >  1:1909262/1‑157 (MQ=255)
                                                                                                                                                                                                                                          gCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAgg                                                           <  1:3203790/266‑1 (MQ=255)
                                                                                                                                                                                                                                           ccTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATAATGATGAGATCCGCtt                                    <  1:2060979/288‑1 (MQ=255)
                                                                                                                                                                                                                                            cTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATAATGATGAGAt                                          <  1:524495/281‑1 (MQ=255)
                                                                                                                                                                                                                                             tCCACTCCCTCCTGGATCACAATCCGCTCTTTCACCGCCGCGA‑CTTCCACTTTTTGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCAt                                                                                   <  2:1346357/239‑1 (MQ=255)
                                                                                                                                                                                                                                               cAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCg                                                                                                             >  2:2769550/1‑211 (MQ=255)
                                                                                                                                                                                                                                               cAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATAATGATGAGATCCGCTTCATTg                               <  2:324202/289‑1 (MQ=255)
                                                                                                                                                                                                                                                      tcctGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCaata                                                    <  1:1012458/261‑1 (MQ=255)
                                                                                                                                                                                                                                                       cctGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTcagca                                                                                                <  1:687152/216‑1 (MQ=255)
                                                                                                                                                                                                                                                       cctGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTTGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATAATGCTGAAATACGCTTCATTGAAAGCggg                       >  2:1030211/1‑287 (MQ=255)
                                                                                                                                                                                                                                                       cctGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGta                                                                         >  1:1346357/1‑239 (MQ=255)
                                                                                                                                                                                                                                                       cctGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGcc                                                              <  1:2922732/250‑1 (MQ=255)
                                                                                                                                                                                                                                                         tGGATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTTCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCGGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTAAAAAAAATGCCAGGCCCAATAATGATGAGATCCGCTCCTATGATAGGGTGa                      >  2:2200481/1‑288 (MQ=255)
                                                                                                                                                                                                                                                           gATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCaata                                                    >  2:3053652/1‑256 (MQ=255)
                                                                                                                                                                                                                                                           gATCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCaata                                                    <  1:3053652/256‑1 (MQ=255)
                                                                                                                                                                                                                                                            aTCACAATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATAATGATGAGATCCGCTTCATTGATAGCGTGaa                     <  1:1433025/286‑1 (MQ=255)
                                                                                                                                                                                                                                                              cacaATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAactcaactca                                                                                                                                                                      <  1:2759879/139‑1 (MQ=255)
                                                                                                                                                                                                                                                                caATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCt                                                                             >  2:958665/1‑226 (MQ=255)
                                                                                                                                                                                                                                                                caATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCt                                                                             <  1:958665/226‑1 (MQ=255)
                                                                                                                                                                                                                                                                caATCCGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGcc                                                         >  2:1526959/1‑246 (MQ=255)
                                                                                                                                                                                                                                                                     cGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTgc                                                                                                                              >  1:638693/1‑172 (MQ=255)
                                                                                                                                                                                                                                                                     cGCTCTTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAgg                                                                               <  1:991850/219‑1 (MQ=255)
                                                                                                                                                                                                                                                                        tctTTCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATAATGATGAGATCCGCTTCATTGATAGCGTGAACCGCCTCACGCGTTg      <  1:2689268/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                           ttCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATAATGATGAGATCCGCTTCATTGATAGCGTGAACCGCCTCACGCGTTGCgg   >  2:50180/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                            tCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATAATGATGAGATCCGCTTCATTGATAGCGTGAACCGCCTCACGCGTTGCggg  <  1:342783/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                            tCACCGCCGAGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATAATGATGAGATCCGCTTCATTGATAGCGTGAACCGCCTCACGCGTTGCggg  <  1:3033767/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                   |||                                                                                                                                                                                                                                                                                        
AACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCGCTGA‑CATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATAATGATGAGATCCGCTTCATTGATAGCGTGAACCGCCTCACGCGTTGCGGG  >  CP042583/678415‑678971

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A