Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F210 I1 R1 4930 262.8 3829204 96.6% 3699011 272.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 678,690 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583678,6900GC98.7% 691.9 / NA 297intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (1/3);  new base C (147/145);  total (149/148)
Fisher's exact test for biased strand distribution p-value = 6.22e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP042583678,6910CG99.3% 668.4 / NA 297intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/1);  new base G (148/143);  total (149/148)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583678,6920TA98.6% 681.7 / NA 297intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/1);  major base A (145/146);  minor base C (3/1);  total (149/148)
Fisher's exact test for biased strand distribution p-value = 6.22e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 297 total aligned reads displayed.

CGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CGCTGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATAATGATGAGATCCGCTTCATTGATAGCGTGAACCGCCTCACGCGTTGCGGG  >  CP042583/678410‑678971
                                                                                                                                                                                                                                                                                         |||                                                                                                                                                                                                                                                                                        
cGGAAACCAGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATc                                                                                                                                                                                                                                                                                    <  1:502305/289‑1 (MQ=255)
cGGAAAACATCCTGAGTAGTTACGTTTATCAGGTCTACATTTTCTCCGAAATTTATGGAAGTGTCGCGGTTAGTAGGTCGGATAAGGCGTTCACGCCGTATCCGTCATAAACAACGCGCACGTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCTGATTTCCGTTATCCTAACGCCTGTAACGCCTTTTCCAGCGCTTTATGTAACCACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATc                                                                                                                                                                                                                                                                                    <  2:1321979/289‑1 (MQ=255)
          ccTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCCCAATCCGCACTTTCACCG‑CCGACACATCC‑ACTTTTgg                                                                                                                                                                                                                                                                          >  2:545080/1‑288 (MQ=255)
           cTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGc                                                                                                                                                                                                                                                                         <  1:1707370/288‑1 (MQ=255)
                  gcTACGGTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCAATTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGAt                                                                                                                                                                                                                                                                 <  2:328010/289‑1 (MQ=255)
                  gcTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGAt                                                                                                                                                                                                                                                                 <  1:475374/289‑1 (MQ=255)
                    tACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGc                                                                                                                                                                                                                                                                         <  1:633393/279‑1 (MQ=255)
                    tACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTGCACCG‑CGGAGACATCC‑ACTTTTGGCCCGACGATGa                                                                                                                                                                                                                                                               >  1:1043574/1‑289 (MQ=255)
                      cGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCCCCG‑CCGCGACATCC‑ACTTTTGGCCCGCCGATCAc                                                                                                                                                                                                                                                              >  2:1442628/1‑288 (MQ=255)
                       gCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCg                                                                                                                                                                                                                                                            <  1:744314/289‑1 (MQ=255)
                                gCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGc                                                                                                                                                                                                                                                                         <  1:973297/267‑1 (MQ=255)
                                gCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGATATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGCCCTCCAGCACCACCTGGACCACAACCCGCTCTTTCACCG‑C‑CGAGCACCCAACTTTTGGCCCGACGATTGCCACCTCAAttc                                                                                                                                                                                                                                                   >  2:570949/1‑287 (MQ=38)
                                  cTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGa                                                                                                                                                                                                                                                   >  1:1240785/1‑287 (MQ=255)
                                   tACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCACCAATGACCt                                                                                                                                                                                                                                                >  2:621347/1‑289 (MQ=255)
                                         ttCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTAc                                                                                                                                                                                                                                          <  1:1767067/289‑1 (MQ=255)
                                          tctcCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGCTAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTAc                                                                                                                                                                                                                                          >  1:351846/1‑288 (MQ=255)
                                                        tGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGCCCTTTTTACCAACATACTGCTCCa                                                                                                                                                                                                                           >  2:1895724/1‑289 (MQ=255)
                                                        tGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCa                                                                                                                                                                                                                           >  2:810313/1‑289 (MQ=255)
                                                          aaTTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACa                                                                                                                                                                                                                                     <  2:905759/277‑1 (MQ=255)
                                                                               ggATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGc                                                                                                                                                                                                                                                                         <  1:1780204/220‑1 (MQ=255)
                                                                                       cGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAAt                                                                                                                                                                                             <  1:935203/288‑1 (MQ=255)
                                                                                          tCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGc                                                                                                                                                                                         <  1:1638132/289‑1 (MQ=255)
                                                                                          tCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGc                                                                                                                                                                                         <  2:1033161/289‑1 (MQ=255)
                                                                                           cACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTg                                                                                                                                                                                                                                >  2:479453/1‑249 (MQ=255)
                                                                                            aCGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCg                                                                                                                                                                                       <  1:613077/289‑1 (MQ=255)
                                                                                            aCGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCg                                                                                                                                                                                       <  1:1873628/289‑1 (MQ=255)
                                                                                                 tcATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGt                                                                                                                                                                                  <  2:148450/288‑1 (MQ=255)
                                                                                                   aTCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATg                                                                                                                                                                                                                                                    <  1:843871/221‑1 (MQ=255)
                                                                                                   aTCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACTAACATACTGCTCCATAATTGCCAACTTGCTTTCCCGCTTCAAATTACCCTCCGGTaa                                                                                                                                                                                >  2:1762161/1‑289 (MQ=255)
                                                                                                    tCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTaa                                                                                                                                                                                >  1:1480847/1‑288 (MQ=255)
                                                                                                             aacaacGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAaactcaactc                                                                                                                                                                       >  1:1587776/1‑288 (MQ=255)
                                                                                                                          ttGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAACTTAGCCGCAGGTAAACCCAACTCACCCCCCAGATTg                                                                                                                                                          >  2:1669651/1‑288 (MQ=255)
                                                                                                                          ttGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCATTAACCTAAAGCCTGCAACGCCTTTACCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGc                                                                                                                                                         <  1:1258856/289‑1 (MQ=255)
                                                                                                                                 cAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGAtata                                                                                                                                                  >  2:194255/1‑289 (MQ=255)
                                                                                                                                   aTAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGc                                                                                                                                                                                         <  2:1811078/248‑1 (MQ=255)
                                                                                                                                   aTAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGc                                                                                                                                                                                         >  1:1811078/1‑248 (MQ=255)
                                                                                                                                    tAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATaac                                                                                                                                                >  1:560060/1‑287 (MQ=255)
                                                                                                                                        aaGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCAt                                                                                                                                            <  1:1364735/288‑1 (MQ=255)
                                                                                                                                        aaGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCAt                                                                                                                                            <  1:679179/288‑1 (MQ=255)
                                                                                                                                            cGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGgc                                                                                                                                        >  2:1217891/1‑288 (MQ=255)
                                                                                                                                                   ttCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGt                                                                                                                                <  1:1390175/289‑1 (MQ=255)
                                                                                                                                                                               cTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTc                                                                                                    <  1:1020027/289‑1 (MQ=255)
                                                                                                                                                                                 gTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGcc                                                                                                                                                                  >  1:407449/1‑225 (MQ=255)
                                                                                                                                                                                 gTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGcc                                                                                                                                                                  <  2:407449/225‑1 (MQ=255)
                                                                                                                                                                                 gTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCAACAATGACCTTTTTACCAACATCCTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGCAAACTCAACTCACGCCCCAGATTGCCCATATAAACCATCCGCCCTGGCGTCCGGCGTAATGCCTGGGCGATCTCCTTca                                                                                                   >  2:960969/1‑288 (MQ=255)
                                                                                                                                                                                 gTAACGCCGTTGCCACGGCGTTATGTAACAACGTGAGGTCGTGACCGTACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTcag                                                                                                  <  2:74430/289‑1 (MQ=255)
                                                                                                                                                                                  tAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTcagc                                                                                                 >  1:118140/1‑289 (MQ=255)
                                                                                                                                                                                  tAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCACTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCAATAATTGCCAGCTTGCTTTCCAGCTTCAAATTCGCCGCCGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGCAATGCCTGGGGGATTTCCTTtaga                                                                                                 >  2:269971/1‑288 (MQ=255)
                                                                                                                                                                                    cctccTTTTCCAGCCGCTTATGTAACCACGGTCGGTACTGCCCAGACGGAATATGGCTGGCCTCCAGTCCCGCCTGGTTCACATTCCGCTCTTTCCCCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTcagcag                                                                                               <  2:93092/286‑1 (MQ=255)
                                                                                                                                                                                     cGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCCATGACCTTTTTACCAACATACTGCTCCATACTTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGAAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCACCGGCCTGCGGCGTCATGCGTGGGTGATTCTCGTcagcag                                                                                               >  2:1560598/1‑288 (MQ=255)
                                                                                                                                                                                         ttttTCTGCCCGGTATTTAACAGCTGGCGGTAATGACGATACGGAATATCGCTGGCCTCCAGTATCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGaa                                                                                          <  2:1715360/289‑1 (MQ=255)
                                                                                                                                                                                                      tATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCt                                                                             <  1:1217891/289‑1 (MQ=255)
                                                                                                                                                                                                      tATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCt                                                                             <  1:725864/289‑1 (MQ=255)
                                                                                                                                                                                                                cTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAAGTCCGTGGCGATCGCCTTCAGCAGCAGAATTGTCATCATGCTGGTATaaaaa                                                                   >  2:528438/1‑289 (MQ=255)
                                                                                                                                                                                                                cTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTCGCCCGACGATTACCGCATCACTGACCTTTTTACCAACATACTGCCCCATACTTGCCAGCTTGCTTTCCCGCTTCACATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCAGATATAAACCATCGGCGCTGGCGGTCGGCGTACTGCCTGGGGGCTTGCCTTCAGCCCCAGAATTGGCGCGAGGCTGGTATaaaa                                                                    >  2:1388516/1‑288 (MQ=255)
                                                                                                                                                                                                                  ggCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTgc                                                                                                                              <  1:1427430/228‑1 (MQ=255)
                                                                                                                                                                                                                  ggCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTg                                                                                                                               >  1:377623/1‑227 (MQ=255)
                                                                                                                                                                                                                  ggCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGCTTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTAGAACAACt                                                                 >  2:643481/1‑289 (MQ=255)
                                                                                                                                                                                                                  ggCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCCGCAGAATTGGAATCAGGCTGGTACTAAAACt                                                                 >  2:714439/1‑289 (MQ=255)
                                                                                                                                                                                                                  ggCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATaaaa                                                                    >  2:431742/1‑286 (MQ=255)
                                                                                                                                                                                                                  ggCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATaaaa                                                                    >  2:1399906/1‑286 (MQ=255)
                                                                                                                                                                                                                  ggCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATAACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGGGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGGAGaaaa                                                                    >  1:450362/1‑286 (MQ=255)
                                                                                                                                                                                                                   gCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACt                                                                 >  1:1310424/1‑288 (MQ=255)
                                                                                                                                                                                                                     gtgcATGACGATACGGAATGTCGCGGGTCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATCCTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGcc                                                              <  2:1004023/286‑1 (MQ=255)
                                                                                                                                                                                                                     ggTCATGACGATCCGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGcc                                                              <  1:182974/289‑1 (MQ=255)
                                                                                                                                                                                                                     ggTCATGACGATACGTATTATCGCTGGCCTCCACTACCTCCTGCTTCACAATCCGCTCTTCCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATCACCGCATCTATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACGCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCATCAGAATTGGCATCAGGCTGGTATAAAAACTGcc                                                              <  2:351846/289‑1 (MQ=255)
                                                                                                                                                                                                                     ggTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGcc                                                              <  1:1620864/289‑1 (MQ=255)
                                                                                                                                                                                                                          tGACGATACGGCATATCGCTGCCCTCCCGTACCTCCGGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGcc                                                         <  2:1078734/289‑1 (MQ=255)
                                                                                                                                                                                                                          tGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTcag                                                                                                  <  2:1687939/248‑1 (MQ=255)
                                                                                                                                                                                                                          tGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGcc                                                         <  1:175967/289‑1 (MQ=255)
                                                                                                                                                                                                                                tACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCaata                                                    <  2:1566318/288‑1 (MQ=255)
                                                                                                                                                                                                                                tACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCaata                                                    <  1:431742/288‑1 (MQ=255)
                                                                                                                                                                                                                                 aCGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCaataat                                                  >  2:1524124/1‑289 (MQ=255)
                                                                                                                                                                                                                                       tatCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGGATAAAAACTGCCAGGCCCAATAATGATgag                                            >  1:300442/1‑289 (MQ=255)
                                                                                                                                                                                                                                         tCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATAATGATGAGAt                                          <  1:925546/289‑1 (MQ=255)
                                                                                                                                                                                                                                         tCGCTGGCCGCCAGTACCTCCTTGATCACAATCCGCTCTTTCACCGACGAT‑ACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATAATGATGAGAt                                          <  2:1188726/289‑1 (MQ=255)
                                                                                                                                                                                                                                           gCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATAATGATGAGATcc                                        <  1:194255/289‑1 (MQ=255)
                                                                                                                                                                                                                                            cTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATAATGATGAGATcc                                        >  1:1443654/1‑288 (MQ=255)
                                                                                                                                                                                                                                            cTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCGGGGCGACTTCATTCAGCAGCGGAACTGGCATCAGGCGGGTCTACAAACTGCAAGCACCAATAATGATAAGTTct                                        >  2:1283821/1‑287 (MQ=255)
                                                                                                                                                                                                                                            cTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCACAGATTGCCGATATAAACCATCGGAGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATCATGATGAGATcc                                        >  1:1164287/1‑288 (MQ=255)
                                                                                                                                                                                                                                               gCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGTCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATAATGATGAGATCCGCt                                     >  1:1005166/1‑288 (MQ=255)
                                                                                                                                                                                                                                               gCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGcc                                                         <  1:1690357/268‑1 (MQ=255)
                                                                                                                                                                                                                                               gCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATAATGATGAGATCCGCt                                     >  1:1109153/1‑288 (MQ=255)
                                                                                                                                                                                                                                               gCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATAATGATGAGATCCGCt                                     >  1:1328778/1‑288 (MQ=255)
                                                                                                                                                                                                                                               gCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATAATGATGAGATCCGCt                                     >  1:914290/1‑288 (MQ=255)
                                                                                                                                                                                                                                                    ccgTACCTCCTGGATACCAATCAGCTCTTCCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGTCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATAATGATGAGATCCGCTTCATTg                               <  2:1844929/287‑1 (MQ=255)
                                                                                                                                                                                                                                                        aCCTCCTGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATAATGATGAGATCCGCTTCATTGa                              <  2:1480847/286‑1 (MQ=255)
                                                                                                                                                                                                                                                           tcctGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGcc                                                              >  1:1493432/1‑251 (MQ=255)
                                                                                                                                                                                                                                                            cctGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATAATGATGAGATCCGCTTCATTGATAGCGTg                       >  2:437806/1‑289 (MQ=255)
                                                                                                                                                                                                                                                            cctGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTAGCATCAGGCTGGTATAAAAACTGcc                                                              >  2:1622189/1‑250 (MQ=255)
                                                                                                                                                                                                                                                              tGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATAATGATGAGATCCGCTTCATTGATAGCGTGaa                     <  2:470307/289‑1 (MQ=255)
                                                                                                                                                                                                                                                              tGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATAATGATGAGATCCGCTTCATTGATAGCGTGaa                     <  2:1645756/289‑1 (MQ=255)
                                                                                                                                                                                                                                                              tGGATCACAATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATAATGATGAGATCAGCTTCATTGATAGCGTGa                      >  1:247422/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                     caATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCa                                                                                                                                                                                                                           >  1:1898815/1‑84 (MQ=255)
                                                                                                                                                                                                                                                                     caATCCGCTCTTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGa                                                                                                            <  2:925851/195‑1 (MQ=255)
                                                                                                                                                                                                                                                                           gCTCTTTACCCG‑CCGAGACATCC‑CCTTTTGGCCCGACGATGACCGAATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCCGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATAATGATGAGATCCGCTTCATTGATAGCGTGAACCGCCTCACGCGt        <  2:1241612/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                            ctctTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATAATGATGAGATCCGCTTCATTGATAGCGTGAACCGCCTCACGCGtt       <  2:855952/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                             tctTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATAATGATGAGATCCGCTTCATTGATAGCGTGAACCGCCTCACGCGTTg      <  2:673799/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                             tctTTCACCG‑CCGAGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATAATGATGAGATCCGCTTCATTGATAGCGTGAACCGCCTCACGCGTTg      <  1:592362/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                ttCACCG‑CGCAGACATCC‑ACTTTTGGGCCGACTATGACCGCATAAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATAATGATGAGATCCGCTTCATTGATAGCGTGAACCGCCTCACGCGTTGCgg   <  2:1113067/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                         |||                                                                                                                                                                                                                                                                                        
CGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCG‑CGCTGACATCC‑ACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATAATGATGAGATCCGCTTCATTGATAGCGTGAACCGCCTCACGCGTTGCGGG  >  CP042583/678410‑678971

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A