Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F210 I1 R1 4927 250.2 4002508 96.7% 3870425 266.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 678,690 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583678,6900GC100.0% 609.9 / NA 254intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (139/115);  total (139/115)
*CP042583678,6910CG100.0% 589.8 / NA 254intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (139/115);  total (139/115)
*CP042583678,6920TA99.6% 590.3 / NA 254intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (139/113);  minor base C (0/1);  total (139/115)
Fisher's exact test for biased strand distribution p-value = 4.51e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 254 total aligned reads displayed.

CGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCGCTGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATAATGATGAGATCCGCTTCATTGATAGCGTGAACCGCCTCACGCGTTGCGGG  >  CP042583/678410‑678971
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                       
cgtaaaaCAGCCTGATGCGCTACGCTTATCTGGCCTCCATTTTCTCCGCATTATATTGAATTTGCGCTGTTTGTAGGCCGGATAAGACGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATc                                                                                                                                                                                                                                                                                   <  1:1996036/286‑1 (MQ=255)
          ccTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTACCCGCCGAGACATCCACTTTTgt                                                                                                                                                                                                                                                                          >  1:1575116/1‑287 (MQ=255)
           cTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGc                                                                                                                                                                                                                                                                         <  1:1980538/288‑1 (MQ=255)
           cTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGc                                                                                                                                                                                                                                                                         <  1:1371912/288‑1 (MQ=255)
                    tACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATg                                                                                                                                                                                                                                                                >  2:496264/1‑288 (MQ=255)
                     aCGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGa                                                                                                                                                                                                                                                               >  1:47552/1‑288 (MQ=255)
                           aTCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCCCAATCCGCTCTTTCACCGCCGAGACATCCCCTTTTGGCCCGACGATCACCTCATc                                                                                                                                                                                                                                                        >  2:1122690/1‑289 (MQ=255)
                           aTCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCCCCGGGATCACAATCCGCCCTTTCACCGCCGAGACACCCACTTTTGGCCCGCCGAGTACCGCaac                                                                                                                                                                                                                                                        >  2:1796633/1‑287 (MQ=39)
                              gagCCTGCAGTTTCTCCGAAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATACACAAATCGCACTTTGTCTTCAATAGGAAGCCGGAATTTGCCTTCGGATTTCCGTTAACCGAAGGCCTGTAACGCCTTTGCCAGCGCGTTATGTAACAACGGGCGGTCAGGACGATACGGAATATCGCTGGCCTCCAGGACCTCCTGGATCACAATCGGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAAt                                                                                                                                                                                                                                                     <  2:1747325/287‑1 (MQ=255)
                                gCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGCTCACAATCCGCTCTTTCACCGCCGAGCCATCCACTTTTTGCCCAACGATGACCGCCTCAATg                                                                                                                                                                                                                                                    >  2:1814827/1‑288 (MQ=255)
                                gCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATg                                                                                                                                                                                                                                                    >  1:600497/1‑288 (MQ=255)
                                  cTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGACTATCGCTGGCCTCCAGTACCTCCTGGATCCCAATCCGCTCTTTCACCGTCGAGACATCCAACTTGGGCCCGACGATGACCGCATCAACGAc                                                                                                                                                                                                                                                  >  2:38344/1‑288 (MQ=39)
                                  cTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGa                                                                                                                                                                                                                                                   >  1:1451642/1‑287 (MQ=255)
                                  cTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGAcc                                                                                                                                                                                                                                                 <  2:1451642/289‑1 (MQ=255)
                                    gcATGTTCTCCGCAATATAGTGAAATTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTGCCGTTAACCTAAAGCCTGTCACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCtt                                                                                                                                                                                                                                               <  2:597101/288‑1 (MQ=255)
                                              ggaaatgtgttGAATTTGCGCTGTTTGTAGGCCGGATAAGGCGTTCCCGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACa                                                                                                                                                                                                                                     <  2:1227510/280‑1 (MQ=255)
                                                     gagtggaTTTGCGCGGTGTGTAGGCCGGATAAGGCGTTCACGCCGCATACGGCATAAACAACGCGCACTTTGTCTTCAAGAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCt                                                                                                                                                                                                                              <  2:334172/283‑1 (MQ=255)
                                                        tGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACAACCACTTTTGGCCCGACGATGACCCCATCAATGACCTTTTTACCAACATACTTCACCa                                                                                                                                                                                                                           >  2:1564221/1‑289 (MQ=255)
                                                         gAATTTGCGCGGTTTTGAGGCCGGATAAGGCGGTAACGCCGAATCCGGCATAAACAACGCGCACTTTGTCTTAAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCAt                                                                                                                                                                                                                          <  2:1940749/289‑1 (MQ=255)
                                                           aTTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGGCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATaa                                                                                                                                                                                                                        >  1:664131/1‑289 (MQ=255)
                                                             ttGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAAtt                                                                                                                                                                                                                      >  2:40680/1‑289 (MQ=255)
                                                               gcgcGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAAt                                                                                                                                                                                                                                                     <  1:1938999/256‑1 (MQ=255)
                                                               gcgcGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCtttt                                                                                                                                                                                                                                             <  1:1007031/264‑1 (MQ=255)
                                                               gcgcGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCtttt                                                                                                                                                                                                                                             >  2:1007031/1‑264 (MQ=255)
                                                               gcgcGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTg                                                                                                                                                                                                                     >  2:900498/1‑288 (MQ=255)
                                                               gcgcGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTg                                                                                                                                                                                                                     >  2:1889423/1‑288 (MQ=255)
                                                                   ggTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAgc                                                                                                                                                                                                                <  1:1103187/289‑1 (MQ=255)
                                                                               ggATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCa                                                                                                                                                                                                      >  1:378224/1‑287 (MQ=255)
                                                                                 aTAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCa                                                                                                                                                                                                                                        <  1:727291/251‑1 (MQ=255)
                                                                                       cGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATCCTGCTCCATAATTGCCAGCTTGCTTTCCCGCTTCCAAtt                                                                                                                                                                                            >  2:168180/1‑289 (MQ=255)
                                                                                          tCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCg                                                                                                                                                                                                                                                            <  1:786592/222‑1 (MQ=255)
                                                                                          tCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGc                                                                                                                                                                                         <  2:1320047/289‑1 (MQ=255)
                                                                                          tCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGc                                                                                                                                                                                         <  1:40680/289‑1 (MQ=255)
                                                                                                cgcATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAgg                                                                                                                                                                                   >  2:1915341/1‑289 (MQ=255)
                                                                                                cgcATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCAAAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAACTTAGCCGCAgg                                                                                                                                                                                   >  1:749389/1‑289 (MQ=255)
                                                                                                 gcATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGt                                                                                                                                                                                  <  1:1496481/289‑1 (MQ=255)
                                                                                                   acacGGCATAAACAACGCGCACTTGGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAACCCTGTAACGCCTTTGCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTaa                                                                                                                                                                                <  2:1526638/286‑1 (MQ=255)
                                                                                                                  cgcgCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGc                                                                                                                                                                                                                                                                         >  1:33939/1‑185 (MQ=255)
                                                                                                                  cgcgCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGt                                                                                                                                                                                  >  2:1188761/1‑272 (MQ=255)
                                                                                                                  cgcgCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGcc                                                                                                                                                                  >  1:260510/1‑288 (MQ=255)
                                                                                                                  cgcgCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACATCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATAACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCAGCAGGAAAACTCAACTCACTcc                                                                                                                                                                  >  1:1362048/1‑288 (MQ=255)
                                                                                                                          ttGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGc                                                                                                                                                         <  1:843261/289‑1 (MQ=255)
                                                                                                                                 cAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGAtata                                                                                                                                                  >  1:226691/1‑289 (MQ=255)
                                                                                                                                   aTAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATaa                                                                                                                                                 >  2:1640336/1‑288 (MQ=255)
                                                                                                                                       gAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCAAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCa                                                                                                                                             >  1:1287938/1‑288 (MQ=255)
                                                                                                                                        aaGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCAt                                                                                                                                            <  2:1852914/288‑1 (MQ=255)
                                                                                                                                        aaGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCAt                                                                                                                                            <  1:491851/288‑1 (MQ=255)
                                                                                                                                         aGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAACCGCAGGTAAACCCAACCCACGCCCCAGATTGCCGAAATAAACCAACg                                                                                                                                          >  2:294797/1‑289 (MQ=255)
                                                                                                                                                aTTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTg                                                                                                                                    <  1:1106482/288‑1 (MQ=255)
                                                                                                                                                                ccGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATg                                                                                                                     >  1:1869822/1‑287 (MQ=255)
                                                                                                                                                                      aCCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCg                                                                                                             >  2:1761632/1‑289 (MQ=255)
                                                                                                                                                                           aaGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTgcggcg                                                                                                                          >  1:17780/1‑271 (MQ=255)
                                                                                                                                                                           aaGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTgcggcg                                                                                                                          <  2:17780/271‑1 (MQ=255)
                                                                                                                                                                           aaGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGAttt                                                                                                         >  1:1612097/1‑288 (MQ=255)
                                                                                                                                                                            aGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTcc                                                                                                       <  2:156700/289‑1 (MQ=255)
                                                                                                                                                                                 gTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCAAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATGGCCGATATAAACCATCGGCGCTGGCTGGCCGGGTAAGGCCTGGGCGATTTCCTTca                                                                                                   >  2:1318408/1‑288 (MQ=255)
                                                                                                                                                                                  tAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGCTCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCCCGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTCATGCCTGGGCGATTTCCTTcagc                                                                                                 >  1:1586877/1‑289 (MQ=255)
                                                                                                                                                                                  tAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCCATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGCTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTCGCGTCCGGCGCAATCGCTGGGAGATTTCCCTcagc                                                                                                 >  2:491296/1‑289 (MQ=255)
                                                                                                                                                                                  tAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTcagc                                                                                                 >  2:1602868/1‑289 (MQ=255)
                                                                                                                                                                                          tttCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAAt                                                                                         >  1:45988/1‑289 (MQ=255)
                                                                                                                                                                                            tCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTg                                                                                       >  2:946392/1‑289 (MQ=255)
                                                                                                                                                                                                 cgcgTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGa                                                                                                            <  1:850998/263‑1 (MQ=255)
                                                                                                                                                                                                    gTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAgg                                                                               <  1:1319054/289‑1 (MQ=255)
                                                                                                                                                                                                     ttATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTACGCCCTGGGCGATTTCCTTCAGCAGCAGAAGTTGCATAAGGc                                                                              >  2:624950/1‑289 (MQ=255)
                                                                                                                                                                                                                cTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTTCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCTTTCAGCAGCAGAATTTGCATCAGGGTTGGTTaaaaa                                                                   >  2:1965257/1‑289 (MQ=255)
                                                                                                                                                                                                                  ggCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGTAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAACCCATCGGCGCTGGCGTGAGGCGTAAGGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATaaaa                                                                    >  2:227225/1‑286 (MQ=255)
                                                                                                                                                                                                                  ggCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCt                                                                             <  2:172339/277‑1 (MQ=255)
                                                                                                                                                                                                                  ggCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCt                                                                             >  1:172339/1‑277 (MQ=255)
                                                                                                                                                                                                                  ggCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATaaaa                                                                    >  1:775509/1‑286 (MQ=255)
                                                                                                                                                                                                                  ggCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATaaaa                                                                    >  1:1184740/1‑286 (MQ=255)
                                                                                                                                                                                                                  ggCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACt                                                                 >  2:466671/1‑289 (MQ=255)
                                                                                                                                                                                                                     ggTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGcc                                                              <  1:900498/289‑1 (MQ=255)
                                                                                                                                                                                                                     ggTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGcc                                                              <  1:1564221/289‑1 (MQ=255)
                                                                                                                                                                                                                     ggTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGcc                                                              <  1:1640336/289‑1 (MQ=255)
                                                                                                                                                                                                                        aaTGACGATACGGAATATCGCGTGCCTCCCTTACCTCCTGGATCAAAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAgg                                                           <  2:1021704/288‑1 (MQ=255)
                                                                                                                                                                                                                                tACGTAATATCCCTTGCCTACAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCaata                                                    <  2:844648/288‑1 (MQ=255)
                                                                                                                                                                                                                                tACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCaata                                                    <  1:692582/288‑1 (MQ=255)
                                                                                                                                                                                                                                 aCGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCt                                                                             >  1:305796/1‑262 (MQ=255)
                                                                                                                                                                                                                                 aCGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGGGCGGCGTAATGCCTGGGCGAGTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCACGCCCactaac                                                  >  2:688531/1‑288 (MQ=255)
                                                                                                                                                                                                                                     aaTATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATAatgat                                               <  1:1889423/288‑1 (MQ=255)
                                                                                                                                                                                                                                          cGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGcc                                                              >  1:1224080/1‑268 (MQ=255)
                                                                                                                                                                                                                                           gCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATAATGATGAGATcc                                        <  2:712996/289‑1 (MQ=255)
                                                                                                                                                                                                                                               gCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCCATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAACCTCAACTCCCGCCCCAGATTGCCGATATAAACCATCGGCCCTGGCGTGCGGCGTCATGCCTGGGCAGTTTCCTTCCACAGCAGAAGTTACGTCAGTCCGGTACAAAAACTACCAGGGCCAATAGtgatgaaccagcaa                                     >  2:818742/1‑280 (MQ=255)
                                                                                                                                                                                                                                               gCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATAATGATGAGATCCGCt                                     >  1:277164/1‑288 (MQ=255)
                                                                                                                                                                                                                                                cccccAGTCTCTCCTGGTTCCCACTCCGCTCTTTCCCCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATAATGATGAGATCCGCtt                                    <  2:1400995/285‑1 (MQ=255)
                                                                                                                                                                                                                                                 cTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTCTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATAATGATGAGATCCGCTTCa                                  >  1:1074625/1‑289 (MQ=255)
                                                                                                                                                                                                                                                    cAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATAATGATGAGATCCGCTTCATTg                               <  1:1790044/289‑1 (MQ=255)
                                                                                                                                                                                                                                                    cAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATAATGATGAGATCCGCTTCATTg                               >  1:1844959/1‑289 (MQ=255)
                                                                                                                                                                                                                                                    cAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATAATGATGAGATCCGCTTCATTg                               <  1:667730/289‑1 (MQ=255)
                                                                                                                                                                                                                                                           tcctGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGTTAAACTCAACCCACGCCCCCGATTGCCGATATAAACCATCGGCTCTGCCGTGCGGCCTAATGCCTGCGCGATTTCCTTCAGCAGCAGAATTGCCATCAGGCTGGTACACAAACTGCAAGGCCCAATAATGATGGGATTCACCTCCTTGATatggt                        >  2:344889/1‑285 (MQ=255)
                                                                                                                                                                                                                                                            cctGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCCAATTCGCCGCAGGTAAACACAACCCACGCCCCAGATTGCCGATATAAACCATCGGCCCTGGCGTGCGGCGTAATGCCTGGGCGCTTTACTTAAGCAACAGAATTGGCATCAGGCTGGTATAAAAACTTCAAGGCCCACTAACTATGCAACCCGCTCAATTGATCACGTg                       >  2:1288385/1‑289 (MQ=255)
                                                                                                                                                                                                                                                            cctGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTg                                                                                                                               >  1:869898/1‑185 (MQ=255)
                                                                                                                                                                                                                                                            cctGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTg                                                                                                                               <  2:869898/185‑1 (MQ=255)
                                                                                                                                                                                                                                                            cctGGATCACAATCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATAATGATGAGATcc                                        >  2:1595970/1‑272 (MQ=255)
                                                                                                                                                                                                                                                                       aTCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCtttt                                                                                                                                                                                                                                             >  1:731458/1‑64 (MQ=255)
                                                                                                                                                                                                                                                                       aTCCGCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCtttt                                                                                                                                                                                                                                             <  2:731458/64‑1 (MQ=255)
                                                                                                                                                                                                                                                                           gCTCTTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATAATGATGAGATCCGCTTCATTGATAGCGTGCACCGCCTCACGCGt        >  1:1737106/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                            ctctTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTg                                                                                                                               >  2:767238/1‑169 (MQ=255)
                                                                                                                                                                                                                                                                            ctctTTCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCCCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATAATGATGAGATCCGCTTCATTGATAGCGCGAACCGCCTCACGCGtt       >  1:931738/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                 tCACCGCCGAGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATAATGATGAGATCCGCTTCATTGATAGCGTGAACCGCCTCACGCGTTGCggg  <  1:1814827/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                       
CGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTTCTCCGCAATATATTGAATTTGCGCGGTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACAACGCGCACTTTGTCTTCAATAGGAAGCCGGAATTTTCCTTCGGATTTCCGTTAACCTAAAGCCTGTAACGCCTTTTCCAGCGCGTTATGTAACAACTGGCGGTCATGACGATACGGAATATCGCTGGCCTCCAGTACCTCCTGGATCACAATCCGCTCTTTCACCGCGCTGACATCCACTTTTGGCCCGACGATGACCGCATCAATGACCTTTTTACCAACATACTGCTCCATAATTGCCAGCTTGCTTTCCAGCTTCAAATTAGCCGCAGGTAAACTCAACTCACGCCCCAGATTGCCGATATAAACCATCGGCGCTGGCGTGCGGCGTAATGCCTGGGCGATTTCCTTCAGCAGCAGAATTGGCATCAGGCTGGTATAAAAACTGCCAGGCCCAATAATGATGAGATCCGCTTCATTGATAGCGTGAACCGCCTCACGCGTTGCGGG  >  CP042583/678410‑678971

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A