Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F210 I1 R1 4930 262.8 3829204 96.6% 3699011 272.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 756,705 3 bp→TCG intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583756,7050AT99.6% 647.2 / NA 276intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (152/123);  minor base G (0/1);  total (152/124)
Fisher's exact test for biased strand distribution p-value = 4.49e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583756,7060GC99.3% 647.8 / NA 276intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/2);  new base C (152/122);  total (152/124)
Fisher's exact test for biased strand distribution p-value = 2.01e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583756,7070CG99.6% 648.6 / NA 276intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/1);  new base G (151/123);  total (152/124)
Fisher's exact test for biased strand distribution p-value = 4.51e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01

Only 100 of 276 total aligned reads displayed.

TCGATTTGGCTTTATCACATAGAGCAAATATGCATAAAAATTTGTTAAATACCGTTTTTTAATCCGAGCTATAGTCTCAAACCCTGGCTAAAGTTATTCTTGCGATGCTTTTATATAGCGAGCAGTGCTGGCCGGGAGAAAGTTCTCTTTTCTTACACCGCGCCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTAAGCG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACGATGTTTTCGACTCTAACGAAGTACTGGAAGGCAAATTAATGGCCGGGAGTACCGGCTTTGATCTGGTGGTTCCATCTGCCAGCTTTCTGGAGCGCCAGTTGACTGCGGGAGTTTTCCAGCCG  >  CP042583/756429‑756977
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                                
tCGATTTGGCTTTATCACATAGAGCAAATATGCATAAAAATTTGTTAAATACCGTTTTTTAATCCGAGCTATAGTCTCAAACCCTGGCTAAAGTTATTCTTGCGATGCTTTTATATAGCGAGCAGTGCTGGCCGGGAGAAAGTTCTCTTTTCTTACACCGCGCCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGtt                                                                                                                                                                                                                                                                        >  2:1639893/1‑288 (MQ=255)
       ggCTTTATCACATAGAGCAAATATGCATAAAAATTTGTTAAATACCGTTTTTTAATCCGAGCTATAGTCTCAAACCCTGGCTAAAGTTATTCTTGCGATGCTTTTATATAGCGAGCAGTGCTGGCCGGGAGAAAGTTCTCTTTTCTTACACCGCGCCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGc                                                                                                                                                                                                                                                                <  2:330696/289‑1 (MQ=255)
                  aTAGAGCAAATATGCATAAAAATTTGTTAAATACCGTTTTTTAATCCGAGCTATAGTCTCAAACCCTGGCTAAAGTTATTCTTGCGATGCTTTTATATAGCGAGCAGTGCTGGCCGGGAGAAAGTTCTCTTTTCTTACACCGCGCCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCg                                                                                                                                                                                                                                                     >  1:1880945/1‑289 (MQ=255)
                      agCAAATATGCATAAAAATTTGTTAAATACCGTTTTTTAATCCGAGCTATAGTCTCAAACCCTGGCTAAAGTTATTCTTGCGATGCTTTTATATAGCGAGCAGTGCTGGCCGGGAGAAAGTTCTCTTTTCTTACACCGCGCCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGtc                                                                                                                                                                                                                                                   >  2:1039115/1‑287 (MQ=255)
                           atatGCATAAAAATTTGTTAAATACCGTTTTTTAATCCGAGCTATAGTCTCAAACCCTGGCTAAAGTTATTCTTGCGATGCTTTTATATAGCGAGCAGTGCTGGCCGGGAGAAAGTTCTCTTTTCTTACACCGCGCCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCg                                                                                                                                                                                                                                            >  1:1143672/1‑289 (MQ=255)
                                cATAAAAATTTGTTAAATACCGTTTTTTAATCCGAGCTATAGTCTCAAACCCTGGCTAAAGTTATTCTTGCGATGCTTTTATATAGCGAGCAGTGCTGGCCGGGAGAAAGTTCTCTTTTCTTACACCGCGCCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCAc                                                                                                                                                                                                                                        >  1:1307144/1‑288 (MQ=255)
                                cATAAAAATTTGTTAAATACCGTTTTTTAATCCGAGCTATAGTCTCAAACCCTGGCTAAAGTTATTCTTGCGATGCTTTTATATAGCGAGCAGTGCTGGCCGGGAGAAAGTTCTCTTTTCTTACACCGCGCCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCAc                                                                                                                                                                                                                                        >  2:770984/1‑288 (MQ=255)
                                  tAAAAATTTGTTAAATACCGTTTTTTAATCCGAGCTATAGTCTCAAACCCTGGCTAAAGTTATTCTTGCGATGCTTTTATATAGCGAGCAGTGCTGGCCGGGAGAAAGTTCTCTTTTCTTACACCGCGCCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCt                                                                                                                                                                                                                                     <  1:80883/289‑1 (MQ=255)
                                          tGTTAAATACCGTTTTTTAATCCGAGCTATAGTCTCAAACCCTGGCTAAAGTTATTCTTGCGATGCTTTTATATAGCGAGCAGTGCTGGCCGGGAGAAAGTTCTCTTTTCTTACACCGCGCCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGATAGAGATATGACCGCCTTAAATAAAAAATGTCTATCGG‑GTCTGGTTGCGGGTGCCATGATGGCCGACTCTGGCGGCACGCTCCCGGccg                                                                                                                                                                                                                             >  2:18338/1‑287 (MQ=255)
                                          tGTTAAATACCGTTTTTTAATCCGAGCTATAGTCTCAAACCCTGGCTAAAGTTATTCTTGCGATGCTTTTATATAGCGAGCAGTGCTGGCCGGGAGAAAGTTCTCTTTTCTTACACCGCGCCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCGTATATAAAAAATGGCTATCGG‑GTCTGGTTGGGGGTGCTATGATGGCCGTCTCTGTCGGCACGCTCGGGGccg                                                                                                                                                                                                                             >  2:450929/1‑287 (MQ=255)
                                                      ttttttAATCCGAGCTATAGTCTCAAACCCTGGCTAAAGTTATTCTTGCGATGCTTTTATATAGCGAGCAGTGCTGGCCGGGAGAAAGTTCTCTTTTCTTACACCGCGCCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGc                                                                                                                                                                                                                                          >  1:1033125/1‑264 (MQ=255)
                                                      ttttttAATCCGAGCTATAGTCTCAAACCCTGGCTAAAGTTATTCTTGCGATGCTTTTATATAGCGAGCAGTGCTGGCCGGGAGAAAGTTCTCTTTTCTTACACCGCGCCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAaca                                                                                                                                                                                                                 >  2:1668825/1‑288 (MQ=255)
                                                      ttttttAATCCGAGCTATAGTCTCAAACCCTGGCTAAAGTTATTCTTGCGATGCTTTTATATAGCGAGCAGTGCTGGCCGGGAGAAAGTTCTCTTTTCTTACACCGCGCCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAaca                                                                                                                                                                                                                 >  2:1874599/1‑288 (MQ=255)
                                                      ttttttAATCCGAGCTATAGTCTCAAACCCTGGCTAAAGTTATTCTTGCGATGCTTTTATATAGCGAGCAGTGCTGGCCGGGAGAAAGTTCTCTTTTCTTACACCGCGCCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAac                                                                                                                                                                                                                  >  1:151427/1‑287 (MQ=255)
                                                         tttAATCCGTGCCATAGCATCAAACCTTGGCTAATCTTATTCTTGCGATTCTTTTATATGACTGGCATTGCTTGCCGGGAGAAAGTTCGATTTTCTTAAACTGCTCCGATAAAAAATATGCACGTTTATTGCATATCGTTCAGTGTTACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCGTAAATAAAAAATGGCTATGGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTA‑AACAAAAAACACTcc                                                                                                                                                                                                             <  2:1591122/289‑1 (MQ=255)
                                                                  aGCTATAGTCTCAAACCCTGGCTAAAGTTATTCTTGCGATGCTTTTATATAGCGAGCAGTGCTGGCCGGGTGAAAGTTCTCTTTTCTTACACCGCGCCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTtata                                                                                                                                                                                                    >  2:218507/1‑289 (MQ=255)
                                                                  aGCTATAGTCTCAAACCCTGGCTAAAGTTATTCTTGCGATGCTTTTATATAGCGAGCAGTGCTGGCCGGGAGAAAGTTCTCTTTTCTTACACCGCGCCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCt                                                                                                                                                                                                                              <  2:1539290/264‑1 (MQ=255)
                                                                     tataGTCTCAAACCCTGGCTAAAGTTATTCTTGCGATGCTTTTATATAGCGAGCAGTGCTGGCCGGGAGAAAGTTCTCTTTTCTTACACCGCGCCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATaa                                                                                                                                                                                                   <  1:368224/287‑1 (MQ=255)
                                                                       taGTCTCAAACCCTGGCTAAAGTTATTCTTGCGATGCTTTTATATAGCGAGCAGTGCTGGCCGGGAGAAAGTTCTCTTTTCTTACACCGCGCCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTgg                                                                                                                                                                                               <  2:1373297/289‑1 (MQ=255)
                                                                               aaCCCTGGCTAAAGTTATTCTTGCGATGCTTTTATATAGCGAGCAGTGCTGGCCGGGAGAAAGTTCTCTTTTCTTACACCGCGCCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGc                                                                                                                                                                                                                                                       >  2:907958/1‑226 (MQ=255)
                                                                                    tGGCTAAAGTTATTCTTGCGATGCTTTTATATAGCGAGCAGTGCTGGCCGGGAGAAAGTTCTCTTTTCTTACACCGCGCCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTg                                                                                                                                                                                                                                                                 <  1:767177/211‑1 (MQ=255)
                                                                                      gCTAAAGTTATTCTTGCGATGCTTTTATATAGCGAGCAGTGCTGGCCGGGAGAAAGTTCTCTTTTCTTACACCGCGCCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGc                                                                                                                                                                                 >  1:12926/1‑288 (MQ=255)
                                                                                       cTACAGTTCTTCTGGGGATGCTTTTATATAGCTGGCAGTGCTGGCCGGGATAAAGTTCTCTTTTCTTACACCGCGCGTATCAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGcc                                                                                                                                                                                <  2:1015944/288‑1 (MQ=255)
                                                                                               aTTCTTGCGATGCTTTTATATAGCGAGCAGTGCTGGCCGGGAGAAAGTTCTCTTTTCTTACACCGCGCCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACg                                                                                                                                                                       <  1:1399699/289‑1 (MQ=255)
                                                                                                                   taGCGAGCAGTGCTGGCCGGGAGAAAGTTCTCTTTTCTTACACCGCGCCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGa                                                                                                                                                   <  1:461024/289‑1 (MQ=255)
                                                                                                                     gCGAGCAGTGCTGGCCGGGAGAAAGTTCTCTTTTCTTACACCGCGCCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCAAATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGaa                                                                                                                                                  >  2:873730/1‑288 (MQ=255)
                                                                                                                      cgcgCAGTGCTGGCCGGGAGAAAGTTCTCTTTTCTTACACCGCGCCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGaaa                                                                                                                                                 >  1:1561779/4‑288 (MQ=255)
                                                                                                                      cGAGCAGTGCTGGCCGGGAGAAAGTTCTCTTTTCTTACACCGCGCCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGc                                                                                                                                                                                                                                          >  1:150262/1‑200 (MQ=255)
                                                                                                                      cGAGCAGTGCTGGCCGGGAGAAAGTTCTCTTTTCTTACACCGCGCCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCt                                                                                                                                                                                                                                     >  1:790766/1‑205 (MQ=255)
                                                                                                                      cGAGCAGTGCTGGCCGGGAGAAAGTTCTCTTTTCTTACACCGCGCCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACaaaaaa                                                                                                                                                                                                                   >  2:547771/1‑222 (MQ=255)
                                                                                                                      cGAGCAGTGCTGGCCGGGAGAAAGTTCTCTTTTCTTACACCGCGCCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACaaaaaa                                                                                                                                                                                                                   <  1:547771/222‑1 (MQ=255)
                                                                                                                      cGAGCAGTGCTGGCCGGGAGAAAGTTCTCTTTTCTTACACCGCGCCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGaaa                                                                                                                                                 >  1:1853975/1‑288 (MQ=255)
                                                                                                                       gAGCAGTGCTGGCCGGAAGAAAGTTCTCTTTTCTTACACCGCGCCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAAc                                                                                                                                                <  2:801488/288‑1 (MQ=255)
                                                                                                                        aGCAGTGCTGGCCGGGAGAAAGTTCTCTTTTCTTACACCGCGCCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAAcc                                                                                                                                               <  2:1880945/288‑1 (MQ=255)
                                                                                                                           aGTGCTGGCCGGGAGAAAGTTCTCTTTTCTTACACCGCGCCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTa                                                                                                                                           >  2:1430571/1‑289 (MQ=255)
                                                                                                                                       gagaAAGTTCTCTTTTCTTACACCGCGCCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGACAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCt                                                                                                                               >  2:1260767/1‑289 (MQ=255)
                                                                                                                                       gagaAAGTTCTCTTTTCTTACACCGCGCCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCt                                                                                                                               >  1:210486/1‑289 (MQ=255)
                                                                                                                                       gagaAAGTTCTCTTTTCTTACACCGCGCCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAAAGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTATGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCAACCTTTATAACTGGTCTGATTATAACGCCCGCGCCACGGTGGCTAAGTTTGAAAACGAAACCGGTATTAAAGTCGTCt                                                                                                                               >  2:1758457/1‑289 (MQ=255)
                                                                                                                                        agaAAGTTCTCTTTTCTTACACCGCGCCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGa                                                                                                                                                                                          >  2:1090428/1‑229 (MQ=255)
                                                                                                                                        agaAAGTTCTCTTTTCTTACACCGCGCCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGa                                                                                                                                                                                          <  1:1090428/229‑1 (MQ=255)
                                                                                                                                                    tttCTTACACCGCGCCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACGATGTTTTCGa                                                                                                                  <  1:1802808/289‑1 (MQ=255)
                                                                                                                                                          acacCGCGCCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACGATGTTTTCGACTCTaa                                                                                                            <  1:672174/289‑1 (MQ=255)
                                                                                                                                                            acCGCGCCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTCTAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGATATTAAAGTCGTCTACGATGTTTTCGACTCTAACg                                                                                                          >  2:367354/1‑289 (MQ=255)
                                                                                                                                                            acCGCGCCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACGATGTTTTCGACTCTAACg                                                                                                          <  1:1343173/289‑1 (MQ=255)
                                                                                                                                                            acCGAGCCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACGTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACGATGTTTTCGACTCTAACg                                                                                                          <  1:1723271/289‑1 (MQ=255)
                                                                                                                                                             ccGCGCCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACGATGTTTTCGACTCTAACGa                                                                                                         <  1:1840414/289‑1 (MQ=255)
                                                                                                                                                               gcgcCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACGATGTTTTCGACTCTAACGAAg                                                                                                       >  1:693402/1‑289 (MQ=255)
                                                                                                                                                                cgcCGATAAAAAATATGCCCGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAGCTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAACAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCAGGGTCGC‑GCTGTAACAAAAAACACTCCACATTTATAACTGCTCTGATTATGTCGACCTGGACACGTTCGCCAATTTTGATAAAGACACCGACATTAAAGTCGTCTACGATGATTTCGTCTCTacacaagt                                                                                                      >  2:1843653/1‑282 (MQ=255)
                                                                                                                                                                cgcCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCca                                                                                                                                                                                                            >  2:648908/1‑187 (MQ=255)
                                                                                                                                                                cgcCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTtata                                                                                                                                                                                                    >  2:1325075/1‑195 (MQ=255)
                                                                                                                                                                cgcCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATaa                                                                                                                                                                                                   >  2:1557816/1‑196 (MQ=255)
                                                                                                                                                                cgcCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTCAAGTCGTCTACGATGTGTTCGACTCAAACGAAGt                                                                                                      >  2:1149319/1‑289 (MQ=255)
                                                                                                                                                                cgcCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACg                                                                                                                            <  2:550864/267‑1 (MQ=255)
                                                                                                                                                                cgcCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACg                                                                                                                            >  1:550864/1‑267 (MQ=255)
                                                                                                                                                                cgcCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACGATGTTTTCGACTCTAACg                                                                                                          >  2:59757/1‑285 (MQ=255)
                                                                                                                                                                cgcCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACGATGTTTTCGACTCTAACGAAGt                                                                                                      >  1:1675156/1‑289 (MQ=255)
                                                                                                                                                                cgcCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACGATGTTTTCGACTCTAACGAAGt                                                                                                      >  1:1393030/1‑289 (MQ=255)
                                                                                                                                                                cgcCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACGATGTTTTCGACTCTAACGAAGt                                                                                                      >  1:58914/1‑289 (MQ=255)
                                                                                                                                                                cgcCGATAAAAAATATGCAAGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGAGGGCAGTCTCTGTCGGCAGGCTCGCGGCTG‑AACAAAAAACACTCCCAATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTCTTAAACTCGACAACGATGTTTTCGACTCTAACGAAGt                                                                                                      >  2:493533/1‑289 (MQ=255)
                                                                                                                                                                        aaaaaT‑TGCACGTTTATTGCATATCTTTCAGTGTGACAAATTTTGT‑TAGTTTGTTAACGAACTTTCAGAAGGAAAGGGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACGATGTTTTCGACTCTAACGAAGTACTGGAAgg                                                                                             <  2:429568/289‑1 (MQ=255)
                                                                                                                                                                          aaaTATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACGATGTTTTCGACTCTAACGAAGTACTGGAAGGc                                                                                            <  1:1639893/289‑1 (MQ=255)
                                                                                                                                                                                gCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACGATGTTTTCGACTCTAACGAAGTACTGGAAGGCAAATTa                                                                                      <  1:1874599/289‑1 (MQ=255)
                                                                                                                                                                                gCACCTTTGTTCGATATATTTCAGTGTGACAA‑TTTTGTGTCGTTTGTTAACGAAATTTCAGAAGGAAAGAGATATGACCTCCTTAAATCAAAGATGGCTATCGG‑GTCTGGTGTCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATTTCGCCCCAGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACGATGTTTTCGACTCTAACGAAGTACTGGAAGGCAAATTa                                                                                      <  2:1404296/289‑1 (MQ=255)
                                                                                                                                                                                  ccGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTAGCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACGATGTTTTCGACTCTAACGAAGTACTGGAAGGCAAATTaa                                                                                     <  1:450929/287‑1 (MQ=255)
                                                                                                                                                                                  aCGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACGATGTTTTCGACTCTAACGAAGTACTGGAAGGCAAATTaa                                                                                     <  1:18338/288‑1 (MQ=255)
                                                                                                                                                                                    gTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAAc                                                                                                                                                <  1:561064/227‑1 (MQ=255)
                                                                                                                                                                                       tATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACGATGTTTTCGACTCTAACGAAGTACTGGAAGGCAAATTAATGGCCg                                                                               >  2:415419/1‑289 (MQ=255)
                                                                                                                                                                                              tatCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACGATGTTTTCGACTCTAACGAAGTACTGGAAGGCAAATTAATGGCCGGGAGTAc                                                                        <  2:1489699/289‑1 (MQ=255)
                                                                                                                                                                                              tatCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACGATGTTTTCGACTCTAACGAAGTACTGGAAGGCAAATTAATGGCCGGGAGTAc                                                                        <  2:302149/289‑1 (MQ=255)
                                                                                                                                                                                                tCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACGATGTTTTCGACTCTAACGAAGTACTGGAAGGCAAATTAATGGCCGGGAGTACCg                                                                      >  1:880287/1‑289 (MQ=255)
                                                                                                                                                                                                 cTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACGATGTTTTCGACTCTAACGAAGTACTGGAAGGCAAATTAATGGCCGGGAGTACCg                                                                      >  1:255609/1‑288 (MQ=255)
                                                                                                                                                                                                      aGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATTTCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACGATGTTTTCGACTCTAACGAAGTACTGGAAGGCAAATTAATGGCCGGGAGTACCGGCTTTg                                                                >  2:232359/1‑289 (MQ=255)
                                                                                                                                                                                                        tgtgACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACGATGTTTTCGACTCTAACGAAGTAc                                                                                                    <  1:506641/251‑1 (MQ=255)
                                                                                                                                                                                                        tgtgACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACGATGTTTTCGACTCTAACGAAGTACTGGAAGGCAAATTAATGGCCGGGAGTACCGGCTTTGa                                                               >  1:223056/1‑288 (MQ=255)
                                                                                                                                                                                                        tgtgACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACGATGTTTTCGACTCTAACGAAGTACTGGAAGGCAAATTAATGGCCGGGAGTACCGGCTTTGAt                                                              >  2:1185529/1‑289 (MQ=255)
                                                                                                                                                                                                           gACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACGATGTTTTCGACTCTAACGAAGTACTGGAAGGCAAATTAATGGCCGGGAGTACCGGCTTTGATCtg                                                           >  1:843818/1‑289 (MQ=255)
                                                                                                                                                                                                            aCAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATtata                                                                                                                                                                                     >  2:1261601/1‑166 (MQ=255)
                                                                                                                                                                                                            aCAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATtata                                                                                                                                                                                     <  1:1261601/166‑1 (MQ=255)
                                                                                                                                                                                                            aCAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACGATGTTTTCGACTCTAACGAAGTACTGGAAGGCAAATTAATGGCCGGGAGTACCGGCTTTGATCtgg                                                          >  1:408509/1‑289 (MQ=255)
                                                                                                                                                                                                            aCAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACGATGTTTTCGACTCTAACGAAGTACTGGAAGGCAAATTAATGGCCGGGAGTACCGGCTTTGATCtgg                                                          >  2:383641/1‑289 (MQ=255)
                                                                                                                                                                                                               aCTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACGATGTTTTCGACTCTAACGAAGTACTGGAAGGCAAATTAATGGCCGGGAGTACCGGCTTTGATCtggtgg                                                       <  2:693402/289‑1 (MQ=255)
                                                                                                                                                                                                                  tttGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAgtc                                                                                                                                   <  1:1487810/210‑1 (MQ=255)
                                                                                                                                                                                                                  tttGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACGATGTTTTCGACTCTAACGAAGTACTTGAAGGCAAATTAATGGCCGGGAGTACCGGCTTTGATCTGGTGGtt                                                     >  2:1828629/1‑288 (MQ=255)
                                                                                                                                                                                                                    tGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACGATGTTTTCGACTCTAACGAAGTACTGGAAGGCAAATTAATGGCCGGGAGTACCGGCTTTGCTCTGGTGGTTCCa                                                  >  1:340711/1‑289 (MQ=255)
                                                                                                                                                                                                                          gTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACGATGTTTTCGACTCTAACGAAGTACTGGAAGGCAAATTAATGGCCGGGAGTACCGGCTTTGATCTGGTGGTTCCATCTGc                                             <  2:151427/289‑1 (MQ=255)
                                                                                                                                                                                                                           tttCTTAACGACCTTTCAGAAGGAAACAGGTATGACCGCCTTAAATAAAAAATGGCT‑TGCGTGTCTGTTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGTTCGCGGCTG‑AAAGAAAAACACTCCACATTTATAACTGTTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACGATGTTTTCGACTCTAGCGAAGTACTGGAAGGCAAATTAATGGCCGGGAGTACCGTCTTTGATCTGGTGGTTCCATCTGc                                             <  2:223759/288‑1 (MQ=255)
                                                                                                                                                                                                                                               aGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACGATGTTTTCGACTCTAACGAAGTACTGGAAGGCAAATTAATGGCCGGGAGTACCGGCTTTGATCTGGTGGTTCCATCTGCCAGCTTTCTGGAGCGCCAg                          <  1:1185529/287‑1 (MQ=255)
                                                                                                                                                                                                                                                  aaaGAGATATGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGCTTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTACTAAAGTCGTCTACGATGTTTTCGACTCTAACGAAGTACTGGAAGGCAAATTAATGGCCGGGAGTACCGCCTGTGATCTGCTGGTTCCATCTGCCAGCTTTCTGGAGCGCCAGttca                      >  2:206963/1‑286 (MQ=255)
                                                                                                                                                                                                                                                        atatGACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACGATGTTTTCGACTCTAACGAAGTACTGGAAGGCAAATTAATGGCCGGGAGTACCGGCTTTGATCTGGTGGTTCCATCTGCCAGCTTTCTGGAGCGCCAGTTGACTGCggg               >  2:1426696/1‑289 (MQ=255)
                                                                                                                                                                                                                                                         tatGACCGCCTTAAATAAAAAATGGCTTTCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACGATGTTTTCGACTCTAACGAAGTACTGGAAGGCAAATTAATGGCCGGGAGTACCGGCTTTGATCTGGTGGTTCCATCTGCCAGCTTTCTGGAGCGCCAGTTGACTGCggg               <  1:1607115/288‑1 (MQ=255)
                                                                                                                                                                                                                                                            gACCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGCTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGACTATATCGCCCCGGACACGCAGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACGATGTTTTCGACTCTAACGAAGTACTGGAAGGCAAATTAATGGACGGGAGTACTGGCTCTGTTCTGGTGGTTCCAGCTGCCAGCTTTCGGGAGCGCCAGTTGACTGCGGGAGtt           >  2:936097/1‑289 (MQ=255)
                                                                                                                                                                                                                                                             aCCGCCTTAAATAAATAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGcc                                                                                                                                                                                <  2:62169/123‑1 (MQ=255)
                                                                                                                                                                                                                                                             aCCGCCTTAAATAAATAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGcc                                                                                                                                                                                >  1:62169/1‑123 (MQ=255)
                                                                                                                                                                                                                                                             aCCGCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCCCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACGATGTTTTCGACTCTAACGAAGTACTGGAAGGCAAATTAATGGc                                                                                 >  1:938112/1‑218 (MQ=255)
                                                                                                                                                                                                                                                                gCCTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACGATGTTTTCGACTCTAACGAAGTACTGGAAGGCAAATTAATGGCCGGGAGTACCGGCTTTGATCTGGTGGTTCCATCTGCCAGCTTTCTGGAGCGCCAGTTGACTGCGGGAGTTTTcc       >  1:380922/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                 ccTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGAACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGt                                                                                                                                                                                              >  1:1427176/1‑105 (MQ=255)
                                                                                                                                                                                                                                                                  cTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAGAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACGATGTTTTCGACTCTAACGAAGTACTGGAAGGCAAATTAATGGCCGGGAGTACCGGCTTTGATCTGGTGGTTCCATCTGCCAGCTTGCTGGAGCGCCAGTTGACTGCGGGAGTTTTCCa      >  2:582561/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                  cTTAAATAAAAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCTGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACGATGTTTTCGACTCTAACGAAGTACTGGAAGGCAAATTAATGGCCGGGAGTACCGGCTTTGATCTGTTGGTTCCATCTGCCAGCATTCTGGAGAGACAGGTTACTGCGGGCGTTTTcta      >  2:1795268/1‑286 (MQ=255)
                                                                                                                                                                                                                                                                     aaataaaAAATGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACGATGTTTTCGACTCTAACGAAGTACTGGAAGGCAAATTAATGGCCGGGAGTACCGGCTTTGATCTGGTGGTTCCATCTGCCAGCTTTCTGGAGCGCCAGTTGACTGCGGGAGTTTTCCAGCCg  <  1:83785/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                           aaaaTGGCTATCGG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACGATGTTTTCGACTCTAAAGAAGTACTGGAAGGCAAATTAATGGCCggg                                                                             >  2:965900/1‑208 (MQ=255)
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                                
TCGATTTGGCTTTATCACATAGAGCAAATATGCATAAAAATTTGTTAAATACCGTTTTTTAATCCGAGCTATAGTCTCAAACCCTGGCTAAAGTTATTCTTGCGATGCTTTTATATAGCGAGCAGTGCTGGCCGGGAGAAAGTTCTCTTTTCTTACACCGCGCCGATAAAAAATATGCACGTTTATTGCATATCTTTCAGTGTGACAACTTTTGT‑TCGTTTGTTAACGAACTTTCAGAAGGAAAGAGATATGACCGCCTTAAATAAAAAATGGCTAAGCG‑GTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTG‑AACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACGATGTTTTCGACTCTAACGAAGTACTGGAAGGCAAATTAATGGCCGGGAGTACCGGCTTTGATCTGGTGGTTCCATCTGCCAGCTTTCTGGAGCGCCAGTTGACTGCGGGAGTTTTCCAGCCG  >  CP042583/756429‑756977

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A