Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F210 I1 R1 4930 262.8 3829204 96.6% 3699011 272.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,966,128 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,966,1280GC100.0% 410.7 / NA 175intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (114/61);  total (114/61)
*CP0425831,966,1290CG99.4% 399.5 / NA 175intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/1);  new base G (113/59);  total (114/61)
Fisher's exact test for biased strand distribution p-value = 3.47e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,966,1300TA98.3% 407.2 / NA 175intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (111/61);  minor base C (3/0);  total (114/61)
Fisher's exact test for biased strand distribution p-value = 5.52e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 175 total aligned reads displayed.

TGTAATAGAACCCGATCAGCAGATAGGAGCACAGGCCCACGCCTTCCCAGCCGAGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACGCTGAGCATGGTCAGGCTCAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACGCTCATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCGCTGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACACTATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTGCAGCAGCAGCGCAAGGCCG  >  CP042583/1965860‑1966409
                                                                                                                                                                                                                                                                            |||                                                                                                                                                                                                                                                                                       
tgtAATAGAACCCGATCAGCAGATAGGAGCACAGGCCCACGCCTTCCCAGCCGAGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCg                                                                                                                                                                                                                                                                        >  1:1480776/1‑288 (MQ=255)
     tAGAACCCGATCAGCAGATAGGAGCACAGGCCCACGCCTTCCCAGCCGAGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCggctg                                                                                                                                                                                                                                                                    >  1:1575786/1‑287 (MQ=255)
          cccGATCAGCAGATAGGAGCACAGGCCCACGCCTTCCCAGCCGAGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTAt                                                                                                                                                                                                                                                             >  1:1421202/1‑289 (MQ=255)
          cccGATCAGCAGATAGGAGCACAGGCCCACGCCTTCCCAGCCGAGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCAAAGCGGCCGGCTGCAt                                                                                                                                                                                                                                                             >  2:464479/1‑289 (MQ=255)
          cccGATCAGCAGATAGGAGCACAGGCCCACGCCTTCCCAGCCGAGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTGAAAACCGATGTTAAAGTCGCATACCGACATCCACTCCCACAGCGGCTGGCCGTAt                                                                                                                                                                                                                                                             >  2:1320275/1‑289 (MQ=255)
          cccGATCAGCAGATAGGAGCACAGCCCCACGCCTTCCCAGCCGAGGTACATCAGCAGCAGGTTGTCGGCCAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGAGAATAAGGAAACCCACACCAGTGACCACCGAGACCATGGGCAGCCACAGGCCGTCCAGCACCAGGTCAAAACCGATGGCAAAGCCCCCTACCGACTTCCACGCCCACAGCggcgggccgaat                                                                                                                                                                                                                                                             >  2:856054/1‑284 (MQ=255)
                   cagATAGGAGCACAGGCCCACGCCTTCCCAGCCGAGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCACTTCACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGCCAGCGACAGGCCGTCCAGCACCAGGCGAAAACCGATGGTAAAGTCTCCAACCGCAATCCACGTCCCCAGCGGCTGTCTACATGTCTGccg                                                                                                                                                                                                                                                     >  2:1081718/1‑286 (MQ=255)
                     gATAGGAGCACAGGCCCACGCCTTCCCAGCCGAGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCCCGc                                                                                                                                                                                                                                                   >  2:1224052/1‑288 (MQ=255)
                     gATAGGAGCACAGGCCCACGCCTTCCCAGCCGAGGTACAACAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGcc                                                                                                                                                                                                                                                  >  1:1385999/1‑289 (MQ=255)
                           aGCACAGGCCCACGCCTTCCCAGCCGAGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCggct                                                                                                                                                                                                                                                                     >  1:421832/1‑264 (MQ=255)
                                     cACGCCTTCACAGCCGAGGTACATCAGCAGCAGGTTGTCGGCACGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGCCCACCGAGAGCATGGTCAGCGACAGGCCGACCAGCACCAGCTTAACACAGATGTTACAGGCGCCTACCACAACCCACCTCCACCACGACTGGCGCTATGACAGCTCGCAGTTAggtaaacaataa                                                                                                                                                                                                                                  >  2:13824/1‑278 (MQ=255)
                                       cGCCTTCCCAGCCGAGGTACATCAGCAGCAGGTTGTCGGCAAGCAACAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAAc                                                                                                                                                                                                                                <  2:1421202/289‑1 (MQ=255)
                                        gCCTTCCCAGCCGAGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACg                                                                                                                                                                                                                               <  1:1733174/289‑1 (MQ=255)
                                                    gAGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCg                                                                                                                                                                                                                   <  1:1875358/289‑1 (MQ=255)
                                                             cagcagcagGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAgc                                                                                                                                                                                                          <  1:464479/289‑1 (MQ=255)
                                                                cagcagGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCCCTATGTCTGCTCGCCGTTAGCGAACAAATCAACGCCGAAAAAGGCGGTTAcccacgc                                                                                                                                                                                                        >  2:1675821/1‑283 (MQ=255)
                                                                 agcagGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACCGCGGCTGGCCGTATGTCTGCTCGCCGTTAGCGAACAAATCAACGCCGTCCAAGGCgggtgaccacgcc                                                                                                                                                                                                       >  2:426665/1‑277 (MQ=255)
                                                                    agGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGcgccgc                                                                                                                                                                                                     <  1:1656520/287‑1 (MQ=255)
                                                                    agGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCgccgcc                                                                                                                                                                                                    <  1:1911310/288‑1 (MQ=255)
                                                                           cGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCGCACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCca                                                                                                                                                                                             >  2:1029526/1‑288 (MQ=255)
                                                                            ggCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCgg                                                                                                                                                                                                                                                                       <  1:1279549/213‑1 (MQ=255)
                                                                            ggCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCgg                                                                                                                                                                                                                                                                       >  2:1279549/1‑213 (MQ=255)
                                                                                aGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACagag                                                                                                                                                                                        >  1:1573704/1‑288 (MQ=255)
                                                                                       gAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCCGGCTGTATGTCAGCTCGCCGTTAGCGAAGAACTCAACGCCGAAAAAGGCGGTGAACAGCGCCGCCACGCCCACAGAGCCCACGca                                                                                                                                                                                >  2:1873065/1‑288 (MQ=255)
                                                                                             ccaTGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAACACCGATGTTAAAGTCGCTTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCcgacga                                                                                                                                                                           >  2:197375/1‑288 (MQ=255)
                                                                                             ccaTGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGAAGTGAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCGGTAGGTCGGCTCGCCGTCAGCGCAGAAATCAACGCAGAAAAAGGCGGTTACAAGCGCAGCAACGCCCACAGAACCTCCGCcgccga                                                                                                                                                                           >  2:614846/1‑288 (MQ=255)
                                                                                                  cTGGCGATGAACAGGATGGCGCAAGGGAAGAAGGGAGAGTCGCCCTCTTCACCGCGAATATACCAGGAGGCGGACCTGTGAATAAGGAAACACACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATcgcc                                                                                                                                                                      <  2:1668966/288‑2 (MQ=255)
                                                                                                      cGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATcgccgaga                                                                                                                                                                  <  1:1165056/288‑6 (MQ=255)
                                                                                                        aTGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATcgccgagacgt                                                                                                                                                               >  1:287242/1‑281 (MQ=255)
                                                                                                                     tgtAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACCTCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGCCCCACAGAGCCTACGCCGACGATCGCCGACACGTTTCCAGACCAgc                                                                                                                                                   >  2:610449/1‑288 (MQ=255)
                                                                                                                      gtAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAgcg                                                                                                                                                  <  1:1647733/288‑1 (MQ=255)
                                                                                                                          gCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCa                                                                                                                                              >  2:936289/1‑288 (MQ=255)
                                                                                                                               gaagCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCa                                                                                                                                                     <  1:669072/276‑1 (MQ=255)
                                                                                                                               gaagCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGGTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGACCGCCGAGACGTTTCCAGACCCGCGCCCACGGga                                                                                                                                         >  2:1695484/1‑288 (MQ=255)
                                                                                                                               gaagCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAAGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGCTTCCAGACCCGCCCCCACGGgag                                                                                                                                        >  2:1784284/1‑289 (MQ=255)
                                                                                                                                            cccTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGa                                                                                                                           <  1:1018486/289‑1 (MQ=255)
                                                                                                                                            cccTCTTCACCCCGCATCTACCAGGAGGCGTACATGTCAATAAGGAACCCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAACACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGa                                                                                                                           <  1:1404561/289‑1 (MQ=255)
                                                                                                                                                ctTCACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCgg                                                                                                                                                                                                                                                                       <  2:1442787/145‑1 (MQ=255)
                                                                                                                                                ctTCACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATcgccgagac                                                                                                                                                                 >  2:413135/1‑241 (MQ=255)
                                                                                                                                                ctTCACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATcgccgagac                                                                                                                                                                 <  1:413135/247‑7 (MQ=255)
                                                                                                                                                ctTCACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAAGAAGCCAGCAGGACGaa                                                                                                                       >  2:420845/1‑289 (MQ=255)
                                                                                                                                                       gcgcATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACAAGCGCCCACGGGAGAATGCCAGCAGGACAAAGCcaatc                                                                                                                >  1:1302454/1‑289 (MQ=255)
                                                                                                                                                           atatACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATg                                                                                                            >  1:1252300/1‑289 (MQ=255)
                                                                                                                                                             ataCCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCCGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGc                                                                                                          >  1:1015267/1‑289 (MQ=255)
                                                                                                                                                              tcccAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTCCCTACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCa                                                                                                         <  1:1081718/287‑1 (MQ=255)
                                                                                                                                                                  aggaggCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCcac                                                                                                                                                                                            >  1:898263/1‑202 (MQ=255)
                                                                                                                                                                    gaggCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACCTCCAAGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTCGCGAAGAAATCAACGCCGATATAGGCGGTTACCAGCGCCGCCAGGCACACAGAGCCTACGACGGCGATCGCCGACACGATAGCAGACCAGCGCCCACCGGAGAACGCAAGCAGCACGGAGCCGATCAATCGCCAaataa                                                                                                   >  2:236744/1‑289 (MQ=255)
                                                                                                                                                                    gaggCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGGTTTCAGACCAGCGCCCACGGGAGAATGGCAGCAGGGCGAAGCCAACCAATTGCAAaataa                                                                                                   >  2:1400133/1‑289 (MQ=255)
                                                                                                                                                                       gCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGCGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGACCACGGGAGAATGCCAGCCGGACGAAGCCAATCAATGGACAAATAATgg                                                                                                >  2:1512855/1‑289 (MQ=255)
                                                                                                                                                                       gCGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATgg                                                                                                >  2:339554/1‑289 (MQ=255)
                                                                                                                                                                        cGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAAGGCCCGCAGGACGAAGCCAACCAATGCAAAAATAATGGt                                                                                               >  2:1529639/1‑289 (MQ=255)
                                                                                                                                                                        cGTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCCACGCTCGCCGAGACGGTTCCAAACCCGCGCCCACGGGAGGATGACAGCCGGATGAACCCAATCACTGGAAAAACAATGGt                                                                                               >  2:1905569/1‑289 (MQ=255)
                                                                                                                                                                         gTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGtt                                                                                              >  1:340380/1‑289 (MQ=255)
                                                                                                                                                                         gTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGGTTTCAGACCAGCGCCCACGGGAGAATGCCACCAGGCCGAACCCAATCAGAAGCAAACTTATGGtt                                                                                              >  2:1837269/1‑289 (MQ=255)
                                                                                                                                                                         gTACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGGCTGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCCACCCCACAGAGCCAACGCCGACGATCGCCGAGACGTCTTCAGACCAGCCCCCCACGGAGCATGCCAGCAGGACCAAGCCAATCAAAGGCAAAAAAATGGtc                                                                                              >  2:663751/1‑288 (MQ=255)
                                                                                                                                                                          tACATGTGAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTa                                                                                             >  1:1772666/1‑289 (MQ=255)
                                                                                                                                                                             aTGTGAATAAGGAACCCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAgg                                                                                          <  1:1515483/289‑1 (MQ=255)
                                                                                                                                                                                 gAATAAGGAAACCCACACCAGTGACCACCGAGAGCATGTTCAGCGACAGGCCGTCCAGCACCAGGTTAAAGCCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCaa                                                                                       <  1:769512/288‑1 (MQ=255)
                                                                                                                                                                                  aaTAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGc                                                                                     >  1:1443899/1‑289 (MQ=255)
                                                                                                                                                                                  aaTAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGc                                                                                     >  1:840150/1‑289 (MQ=255)
                                                                                                                                                                                  aaTAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTAGCCGTTAGCGCAGAAATCAACGCCGAGAAAGGCGGTTACCAGCACCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGCTTTCAGACCAGCCCCCACGGGAGAATGCCAGCAGGACCAAGCCAGACACTGGCAAAAGAAAGGGTAAGGCAAGc                                                                                     >  2:865192/1‑289 (MQ=255)
                                                                                                                                                                                         aaaCCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCa                                                                              >  1:755091/1‑289 (MQ=255)
                                                                                                                                                                                            cccACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATcc                                                                           >  1:1903583/1‑289 (MQ=255)
                                                                                                                                                                                                cacCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCgcgc                                                                       <  1:1281593/289‑1 (MQ=255)
                                                                                                                                                                                                 acCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGACCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAACTCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCCACGATCGCCGAGACGTTTGCAGACCAGCGCCCCCGCGAGACACCCAGCAAGACGAAGCCAACCCATGGCAAAACAACGGTAAACGCAAGCATGTCCATCCCCGCa                                                                      >  2:1411547/1‑289 (MQ=255)
                                                                                                                                                                                                  ccAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCAt                                                                     <  1:1664460/289‑1 (MQ=255)
                                                                                                                                                                                                      tGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCAtctc                                                                  >  1:1380609/1‑288 (MQ=255)
                                                                                                                                                                                                      tGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCAtctc                                                                  >  1:1522882/1‑288 (MQ=255)
                                                                                                                                                                                                        accaccgagAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGAGGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACt                                                               <  1:212914/281‑1 (MQ=255)
                                                                                                                                                                                                             cgagAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGCGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAACCAATGGCAAAACAATGGTCAAGGCAAGCATCTTCATCCGCGCATCTCACTTactc                                                          >  2:1581018/4‑287 (MQ=255)
                                                                                                                                                                                                               agAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTCACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGAACAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAACCAATCGCAAAATAACGGATAAGGCACGCATGTTCACCCGCGCCTATCACTTactaaa                                                        >  2:882973/2‑285 (MQ=255)
                                                                                                                                                                                                                   cATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATcgccgaga                                                                                                                                                                  <  2:341225/179‑6 (MQ=255)
                                                                                                                                                                                                                    aTGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTactgaatcg                                                     <  2:1474593/287‑8 (MQ=255)
                                                                                                                                                                                                                         cagcgacaggcCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTc                                               <  2:1252300/282‑1 (MQ=255)
                                                                                                                                                                                                                           gcgacaggcCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATTCGCGCATCTCACTTACTGAATCGATGTTCAgg                                            >  1:709612/5‑289 (MQ=255)
                                                                                                                                                                                                                           gcgacaggcCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGA‑CAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATCATGGTTAAGGCGAGCATGTTCATCCGCGCATCTCACCTCATGAATCGATGTTCAGGt                                           >  2:288085/5‑289 (MQ=255)
                                                                                                                                                                                                                               caggcCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCt                                        <  2:1772666/289‑1 (MQ=255)
                                                                                                                                                                                                                                  gcCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCCATGGCAACATAATGGTTAAGGCAAGCATGTTCATCCGCGCACCTCACTTACTGAATCGATGTTCAGGttacgg                                      >  2:1602560/1‑284 (MQ=255)
                                                                                                                                                                                                                                  gcCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTactgaa                                                        <  2:722808/270‑5 (MQ=255)
                                                                                                                                                                                                                                      tCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGt                                                                                               >  1:1669170/1‑227 (MQ=255)
                                                                                                                                                                                                                                      tCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAAAGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCAGCTCACTTACTGAATCCATGTTCAGGTTCGGGccacg                                 >  2:387804/1‑289 (MQ=255)
                                                                                                                                                                                                                                      tCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACCCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGAACGAAGCCAATCAAGGGCAAAATAATGGTTAAAGCAAGCATGTTCATTCGCGCATCCAACTTACTGAATCGATGTTAAGTGTTTGGcgacg                                 >  1:1863606/1‑289 (MQ=255)
                                                                                                                                                                                                                                         aGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGacgacg                              >  2:1217153/1‑289 (MQ=255)
                                                                                                                                                                                                                                           cACCAGGTTAAAACGTATGTTAAAGTCCCCTACCCACGACCACGTCCAAAGCGGCTGGCTGGATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGt                            <  2:1734695/289‑1 (MQ=255)
                                                                                                                                                                                                                                                ggTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGt                       >  1:564907/1‑289 (MQ=255)
                                                                                                                                                                                                                                                ggTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGt                       >  2:1747805/1‑289 (MQ=255)
                                                                                                                                                                                                                                                ggTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGt                       >  1:1327030/1‑289 (MQ=255)
                                                                                                                                                                                                                                                  ttAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGt                       <  1:1039530/287‑1 (MQ=255)
                                                                                                                                                                                                                                                     aaaCCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAAt                                                                                                                                     >  1:1346966/1‑174 (MQ=255)
                                                                                                                                                                                                                                                     aaaCCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCCCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAACAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGAGGTTCCGGTTCTGGCGACGACCGTGAAGTTgca                   >  2:1664035/1‑288 (MQ=255)
                                                                                                                                                                                                                                                      aaCCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTgcagc                 >  1:154082/1‑289 (MQ=255)
                                                                                                                                                                                                                                                        ccGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTgcagcag               <  1:372285/289‑1 (MQ=255)
                                                                                                                                                                                                                                                           aTGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCa                                                                                                                                                                                                                                  <  1:1396186/75‑1 (MQ=255)
                                                                                                                                                                                                                                                           aTGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGCTAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGAAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCTTCTCACTTACTGAATCCATGTTCAGGTTCTGACGACGACGGTGAAGTTgcaacagcg             >  2:1337685/1‑287 (MQ=255)
                                                                                                                                                                                                                                                           aTGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTgcagcagca             >  2:1568400/1‑288 (MQ=255)
                                                                                                                                                                                                                                                           aTGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGAAGTTCAGGTTCTGGCGACGACGGTGAAGTTgcagcagca             >  1:1550379/1‑288 (MQ=255)
                                                                                                                                                                                                                                                           aTGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCG‑TAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTGCagcagcagc           >  2:372367/1‑289 (MQ=255)
                                                                                                                                                                                                                                                               tAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTGCAGCAGCAGCGCa        <  1:1138417/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                aaaGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCCCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTGAAGCCGCAgcgcca       >  2:1589553/1‑287 (MQ=255)
                                                                                                                                                                                                                                                                    gcGCCTACCGACATCCACGTCCACAGCGGCTGGCTGGATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTGCAGCAGCAGCGCAAGGc    <  1:1128097/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                            |||                                                                                                                                                                                                                                                                                       
TGTAATAGAACCCGATCAGCAGATAGGAGCACAGGCCCACGCCTTCCCAGCCGAGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTGAATAAGGAAACCCACACCAGTGACCACGCTGAGCATGGTCAGGCTCAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACGCTCATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCGCTGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACACTATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTGCAGCAGCAGCGCAAGGCCG  >  CP042583/1965860‑1966409

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A