Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,966,128 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,966,1280GC99.2% 594.9 / NA 255intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (2/0);  new base C (147/106);  total (149/106)
Fisher's exact test for biased strand distribution p-value = 5.12e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01
*CP0425831,966,1290CG98.8% 590.4 / NA 255intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (3/0);  new base G (145/106);  total (149/106)
Fisher's exact test for biased strand distribution p-value = 2.68e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP0425831,966,1300TA99.6% 599.4 / NA 255intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (147/106);  minor base C (1/0);  total (149/106)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 255 total aligned reads displayed.

GGTGTAATAGAACCCGATCAGCAGATAGGAGCACAGGCCCACGCCTTCCCAGCCGAGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACGCTGAGCATGGTCAGGCTCAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CGCTCATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCGCTGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACACTATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTGCAGCAGCAGCGCAA  >  CP042583/1965858‑1966404
                                                                                                                                                                                                                                                                                |||                                                                                                                                                                                                                                                                                  
  cgtAATAGAACCCGATCAGCAGATAGGAGCACAGGCCCACGCCTTCCCAGCCGAGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGGTAAAACCGACGTTAAAGTCGCCTA‑CCGACATCCACGTCCAAAGCg                                                                                                                                                                                                                                                                   >  2:1794617/2‑288 (MQ=255)
   gtAATGGAACCGGATCAGCAGCTAGGAGCACAGGACCACGCCTTCCCAGCCGAGGTACATCAGCAGCAGGTGGGCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCgg                                                                                                                                                                                                                                                                  <  2:2251464/288‑1 (MQ=255)
            cccGATCAGCAGATAGGAGCCCAGACCCACGCCTTCCCAGCCGAGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATCCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AACAAGGAAACCCACACCAGTGACCTCCGAGAGCATAGTCCTCGACACGCCGTCCATCACCACGATAGAACCGACATCACAGTCAATCA‑CCGCCATCCACGTCCAGAGCAgccggctgac                                                                                                                                                                                                                                                         >  2:1217567/1‑286 (MQ=255)
            cccGATCAGCAGATAGGAGCACAGGCCCACGCCTTCCCAGCCGAGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGCACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATGTACCAGGAGGCGCACATGTG‑AATAAGGCAACCCACACCAGTGCCCCCCCAGAGCATGGTCATCGACCGGCCGACCAGCACCAGGTTAACACCGATGTTAAAGTCACCTACCGAACA‑CCACGCCCACAGCGGCTGGCTGTAt                                                                                                                                                                                                                                                        >  2:377689/1‑289 (MQ=255)
            cccGATCAGCAGATAGGAGCACAGGCCCACGCCTTCCCAGCCGAGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCgg                                                                                                                                                                                                                                                                  >  2:897349/1‑279 (MQ=255)
            cccGATCAGCAGATAGGAGCACAGGCCCACGCCTTCCCAGCCGAGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTAt                                                                                                                                                                                                                                                        >  1:2251464/1‑289 (MQ=255)
            cccGATCAGCAGATAGGAGCACAGGCCCACGCCTTCCCAGCCGAGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTAt                                                                                                                                                                                                                                                        >  1:2722997/1‑289 (MQ=255)
            cccGATCAGCAGATAGGAGCACAGGCCCACGCCTTCCCAGCCGAGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTAt                                                                                                                                                                                                                                                        >  1:629941/1‑289 (MQ=255)
            cccGATCAGCAGATAGGAGCACAGGCCCACGCCTTCCCAGCCGAGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGGTAAACTCGCCTA‑CCGACACCCACGTCCACAGCGGCCGGCAGtcg                                                                                                                                                                                                                                                        >  2:2662377/1‑287 (MQ=255)
            cccGATCAGCAGATAGGAGCACAGGCCCACGCCTTCCCAGCCGAGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AAGAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCATA‑CCGACACCCACGTCCACAGCGGCTGCCTGTAt                                                                                                                                                                                                                                                        >  2:777229/1‑289 (MQ=255)
                      agATAGGAGCACAGGCCCACGCCTTCCCAGCCGAGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCt                                                                                                                                                                                                                                                 <  1:615205/286‑1 (MQ=255)
                       aatagcaacaggggCCCAGGCCTTCCCCGCCGAGGTACAGCAGAAGCAGGTGGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGc                                                                                                                                                                                                                                              <  2:2023240/276‑1 (MQ=255)
                         tAGGAGCACAGGCCCACGCCTTCCCAGCCGAGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGt                                                                                                                                                                                                                                           <  1:187545/289‑1 (MQ=255)
                                  aGGCCCACGCCTTCCCAGCCGAGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGATAGCATGGTCAGCTACAGGCCGGCCAGCACCAGGTTAAAACCGCTGATAAAGTCGACTA‑CCGACATCCACGTCCACAGAGGCGGGCTGTCTGTATGCGCGCCGATTGCgcaga                                                                                                                                                                                                                                  >  2:2689008/1‑289 (MQ=255)
                                  aGGCCCACGCCTTCCCAGCCGAGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCgaaga                                                                                                                                                                                                                                  >  1:844426/1‑289 (MQ=255)
                                    gCCCACGCCTTCCCAGCCGAGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGaaa                                                                                                                                                                                                                                >  2:154911/1‑289 (MQ=255)
                                       cACGCCTTCCCAGCCGAGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTTACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGCTAAAACCGATGTTAAAGCCGCCTA‑CCGACATCCACGCCCACAGCGGCTGGCCGTATGTCCGCTCCCCGCTAGCGACGAAATcc                                                                                                                                                                                                                             >  2:2679045/1‑288 (MQ=255)
                                         cGCCTTCCCAGCCGAGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCaa                                                                                                                                                                                                                            >  1:2284012/1‑288 (MQ=255)
                                              tCCCAGCCGAGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCgaa                                                                                                                                                                                                                                    >  1:2023240/1‑275 (MQ=255)
                                                         gTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCggctgg                                                                                                                                                                                                                                                              >  1:818648/1‑238 (MQ=255)
                                                                     gagggtgactgaaggCACCGGGACCACCGTGCTGGCGATGAACAGGGTGGGGGAGGCGAAGAGGCGCGAGTAGCCCGCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGGGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGcgccgc                                                                                                                                                                                                <  2:2611713/274‑1 (MQ=255)
                                                                      agGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATaa                                                                                                                                                                                                                   >  1:1785397/1‑268 (MQ=255)
                                                                      agGTTGTAGGCAAGAACCAGAACCGACAGGCTGGGGATGAACAGGTTGGAGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATGCCAGGGGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGcgccgc                                                                                                                                                                                                <  2:2284012/287‑1 (MQ=255)
                                                                              ggCAAGCACAAGACACACCAGGTTGGGAATGACCAGGTTGGGTTAAGCGAACGAGGGGAAGTAGCCCTCTTCACCGCGCAGATACCAGGAGGAGTACATGTG‑AATAAGTAAACCAACGCCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCcaca                                                                                                                                                                                      <  2:333174/289‑1 (MQ=255)
                                                                                     aCCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGcc                                                                                                                                                                                 <  1:557566/287‑1 (MQ=255)
                                                                                                    cTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATcgccg                                                                                                                                                                >  1:2405646/1‑287 (MQ=255)
                                                                                                         gATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATcgccgagac                                                                                                                                                            <  2:844426/288‑7 (MQ=255)
                                                                                                                 ggTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCggct                                                                                                                                                                                                                                                                <  2:662637/180‑1 (MQ=255)
                                                                                                                 ggTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCggct                                                                                                                                                                                                                                                                >  1:662637/1‑180 (MQ=255)
                                                                                                                    tGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCa                                                                                                                                                <  1:1969822/289‑1 (MQ=255)
                                                                                                                         tAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGACCAGCACCAGGCTAAAACCGATGATAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCCGTATGTCTGCCCGCCGTTAGCGAAGCAATCAACGACGATACAGGCGGTTACGCGCGCCGCCAGGCCCAAAGCGCCAACGCCGACAATCGCCGCCACGCTTTCAGACCAgcac                                                                                                                                            >  2:2130933/1‑286 (MQ=255)
                                                                                                                                agaagCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATcgccgaga                                                                                                                                                             >  2:1803081/1‑259 (MQ=255)
                                                                                                                                agaagCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATcgccgaga                                                                                                                                                             <  1:1803081/264‑6 (MQ=255)
                                                                                                                                agaagCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGga                                                                                                                                    >  2:1298834/1‑289 (MQ=255)
                                                                                                                                 gaagCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGgag                                                                                                                                   >  1:105429/1‑289 (MQ=255)
                                                                                                                                         agTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGCTTTCACACCAGCGCACCCGGGAGAATGCca                                                                                                                            >  1:1826685/1‑288 (MQ=255)
                                                                                                                                              cccTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGa                                                                                                                      >  2:108364/1‑289 (MQ=255)
                                                                                                                                                     ccccGCGCATATACCAGGGGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGcc                                                                                                               <  1:287617/287‑1 (MQ=255)
                                                                                                                                                          cgcATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCggct                                                                                                                                                                                                                                                                <  2:210664/139‑1 (MQ=255)
                                                                                                                                                          cgcATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCAc                                                                                                                                        >  1:1260441/1‑259 (MQ=255)
                                                                                                                                                               ataCCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGc                                                                                                     >  1:2029203/1‑289 (MQ=255)
                                                                                                                                                               ataCCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGc                                                                                                     <  1:1136084/289‑1 (MQ=255)
                                                                                                                                                                taCCAGGGGGCGT‑CAAGTGTAATAAGGAAACCCCCACCGGGGACCACCGAGAGCATGGGCAGCGCCAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCa                                                                                                    <  2:2061304/289‑1 (MQ=255)
                                                                                                                                                                taCCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCa                                                                                                    <  1:1425623/289‑1 (MQ=255)
                                                                                                                                                                taCCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCa                                                                                                    <  1:194502/289‑1 (MQ=255)
                                                                                                                                                                     ggaggCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAg                                                                                                                                               >  2:1360107/1‑241 (MQ=255)
                                                                                                                                                                     ggaggCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAaata                                                                                               >  1:2301355/1‑289 (MQ=255)
                                                                                                                                                                      gaggCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCCGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGCGCCTACGCCGACGATCGCCGACACGTTTTCAGATCAGCGACCCCGGGAGACTGCCAGCAGGCCGAAGCCAAACAGTGGCaaaacac                                                                                              >  2:2337487/1‑286 (MQ=255)
                                                                                                                                                                       aggCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAaataa                                                                                              <  1:1595749/288‑1 (MQ=255)
                                                                                                                                                                       aggCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGCCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACACCCACGTCCACAGCGGCCGGCTATATGTCTGCCCGCCGTTAGCGAAGAAATCAACGCCGATAACGCCGGTCACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGCCGAACGCCGAGCCGCTCGTAGACCAGGGCCCACGGGCGAATGCCCGCAGGCCCAAGCCAATCCACGGCcaaca                                                                                                >  2:2176405/1‑284 (MQ=255)
                                                                                                                                                                       aggCGTAAATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAaataa                                                                                              <  1:133280/288‑1 (MQ=255)
                                                                                                                                                                          cGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGcgccgc                                                                                                                                                                                                >  2:2437162/1‑187 (MQ=255)
                                                                                                                                                                          cGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCcgacga                                                                                                                                                                      >  2:2294740/1‑213 (MQ=255)
                                                                                                                                                                          cGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCAc                                                                                                                                        >  1:2338110/1‑243 (MQ=255)
                                                                                                                                                                          cGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACggg                                                                                                                                     >  2:2538088/1‑246 (MQ=255)
                                                                                                                                                                          cGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACggg                                                                                                                                     <  1:2538088/246‑1 (MQ=255)
                                                                                                                                                                          cGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGA‑CAGCGCCCACGGGAGAATGCCAGCAGGAc                                                                                                                     >  2:555180/1‑261 (MQ=255)
                                                                                                                                                                           gTACATGTG‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCgg                                                                                                                                                                                                                                                                  >  2:1262912/1‑120 (MQ=255)
                                                                                                                                                                           gTACATGTG‑AAAAAGGAAACCAAAACCAGTGACCACCGAGGGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGt                                                                                          <  2:1204819/288‑1 (MQ=255)
                                                                                                                                                                                   g‑AATAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCaa                                                                                  <  1:970858/288‑1 (MQ=255)
                                                                                                                                                                                    gacaaaGGAACCCCACACCCTGGACCACCGAGAGCAGGGCCAGCGACAGGCCGTCCAGCACCAGGTTAAAACGGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCaa                                                                                  <  2:1762912/284‑1 (MQ=255)
                                                                                                                                                                                     aaTAAGGAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGc                                                                                >  1:1552388/1‑289 (MQ=255)
                                                                                                                                                                                          ggAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCCACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAAAATTCCAGCAGGAAGAAGCCAATCAATGGCAAAATAAGGGtatacgaaaacatgt                                                                            >  2:581696/1‑274 (MQ=255)
                                                                                                                                                                                             aaCCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCggct                                                                                                                                                                                                                                                                >  1:1107069/1‑105 (MQ=255)
                                                                                                                                                                                               cccACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAgg                                                                                     <  1:24405/274‑1 (MQ=255)
                                                                                                                                                                                               cccACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCaa                                                                                  >  1:1523325/1‑277 (MQ=255)
                                                                                                                                                                                               cccACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCaa                                                                                  <  2:1523325/277‑1 (MQ=255)
                                                                                                                                                                                                   cacCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCgcgc                                                                  <  1:377689/289‑1 (MQ=255)
                                                                                                                                                                                                         tGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGa                                                                                                                      >  1:1625763/1‑231 (MQ=255)
                                                                                                                                                                                                         tGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAaata                                                                                               >  1:461943/1‑254 (MQ=255)
                                                                                                                                                                                                         tGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAaata                                                                                               <  2:461943/254‑1 (MQ=255)
                                                                                                                                                                                                              accgagAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCcgacga                                                                                                                                                                      <  1:1216733/173‑1 (MQ=255)
                                                                                                                                                                                                                cgagAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCTACGATCGCCGAGACGGTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAACAATGGTTAAGGCAAGCATGTTCATCCCAGCATCTCACTTactt                                                     >  2:291839/4‑287 (MQ=255)
                                                                                                                                                                                                                cgagAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAAAATGCCAGCAGGACGAAGCCAATCAATGGCACAATAATGGTTAAGGAAAGCATGTTCAACCCCGCAACCCACTTacgt                                                     >  2:2489796/4‑287 (MQ=255)
                                                                                                                                                                                                                      cATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCcag                                                                                                                           <  2:1641103/213‑1 (MQ=255)
                                                                                                                                                                                                                      cATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCCCACTTactgaatcga                                               >  2:1121565/1‑281 (MQ=255)
                                                                                                                                                                                                                       aTGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGAt                                              >  1:2075058/1‑289 (MQ=255)
                                                                                                                                                                                                                         ggtcagcgacaggcCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGt                                            >  1:421417/10‑289 (MQ=255)
                                                                                                                                                                                                                          gtcagcgacaggcCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCa                                                                                                                                         <  2:616354/187‑1 (MQ=255)
                                                                                                                                                                                                                          gtcagcgacaggcCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGt                                            <  2:2405646/280‑1 (MQ=255)
                                                                                                                                                                                                                             agcgacaggcCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAg                                        >  1:1370816/6‑289 (MQ=255)
                                                                                                                                                                                                                                gacagtcCGTCCAGCACCAGGTTAAACCCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACCGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGtt                                     <  1:1655868/287‑1 (MQ=255)
                                                                                                                                                                                                                                    ggcCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTg                                  >  1:908830/1‑288 (MQ=255)
                                                                                                                                                                                                                                     gcCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGc                                >  1:1238604/1‑289 (MQ=255)
                                                                                                                                                                                                                                     gcCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGc                                >  1:1021756/1‑289 (MQ=255)
                                                                                                                                                                                                                                        gTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGcgac                             <  1:1740479/289‑1 (MQ=255)
                                                                                                                                                                                                                                              cACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGt                       >  1:1613434/1‑289 (MQ=255)
                                                                                                                                                                                                                                                 cAGGTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGaa                    <  1:344328/289‑1 (MQ=255)
                                                                                                                                                                                                                                                   ggTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCCCCGCCGTTAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGCATGCCAGCAGGACGAAGCCAATCGATGGCAAACTAATGGTTAGAGCAAGCCTGTTCAACCGCGCATCTCACTAACTGAATCCAGGTTCAGGTTCTGGCGACGACGGTGaact                  >  2:1987243/1‑287 (MQ=255)
                                                                                                                                                                                                                                                   ggTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATcgccgaga                                                                                                                                                             <  2:93249/150‑6 (MQ=255)
                                                                                                                                                                                                                                                   ggTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGt                  >  1:575179/1‑289 (MQ=255)
                                                                                                                                                                                                                                                   ggTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGt                  >  1:1900712/1‑289 (MQ=255)
                                                                                                                                                                                                                                                    gTTAAAACCGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCGCACTTACGGAATCGATGTTCAGGTTCTGGCGACGACGGAGAAGtt                 >  1:1200574/1‑289 (MQ=255)
                                                                                                                                                                                                                                                           ccGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTgcagcag          <  1:1298834/289‑1 (MQ=255)
                                                                                                                                                                                                                                                           ccGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTgcagcag          <  1:2145489/289‑1 (MQ=255)
                                                                                                                                                                                                                                                           ccGATGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTgcagca           >  2:1901284/1‑288 (MQ=255)
                                                                                                                                                                                                                                                              aTGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCa                                                                                                                                                <  1:2067912/152‑1 (MQ=255)
                                                                                                                                                                                                                                                              aTGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAaataa                                                                                              >  2:1609319/1‑202 (MQ=255)
                                                                                                                                                                                                                                                              aTGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGc                                                                                >  1:2058276/1‑216 (MQ=255)
                                                                                                                                                                                                                                                              aTGTTAAAGTCGCCTA‑CCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCCGAGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACTGAATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTgcagcagca        >  1:2112337/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                                |||                                                                                                                                                                                                                                                                                  
GGTGTAATAGAACCCGATCAGCAGATAGGAGCACAGGCCCACGCCTTCCCAGCCGAGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATGTG‑AATAAGGAAACCCACACCAGTGACCACGCTGAGCATGGTCAGGCTCAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTA‑CGCTCATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACCAGCGCCGCCAGGCCCACAGAGCCTACGCCGACGATCGCGCTGACGTTTTCAGACCAGCGCCCACGGGAGAATGCCAGCAGGACGAAGCCAATCAATGGCAAAATAATGGTTAAGGCAAGCATGTTCATCCGCGCATCTCACTTACACTATCGATGTTCAGGTTCTGGCGACGACGGTGAAGTTGCAGCAGCAGCGCAA  >  CP042583/1965858‑1966404

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A