Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A8 F110 I2 R1	16	53.0	1914758	91.2%	1746259	142.7

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	4,049,913	IS2 (–) +5 bp	noncoding (15‑19/109 nt)	spf →	Spot 42 sRNA antisense regulator of galK translation, Hfq‑dependent

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4049913 =	1 (0.020)	71 (1.340)	50/284	0.1	98.6%	noncoding (15/109 nt)	spf	Spot 42 sRNA antisense regulator of galK translation, Hfq‑dependent
*	?	NC_000913	4498181 =	NA (NA)	71 (1.340)	50/284	0.1	98.6%	noncoding (1/1331 nt)	IS2	repeat region
*	?	NC_000913	= 4049917	0 (0.000)	71 (1.360)	58/280	0.0	100%	noncoding (19/109 nt)	spf	Spot 42 sRNA antisense regulator of galK translation, Hfq‑dependent
*	?	NC_000913	= 4499511	NA (NA)	71 (1.360)	58/280	0.0	100%	noncoding (1331/1331 nt)	IS2	repeat region

TGATAAACATAGCGCATCAGGCATTACGGATCTTTTCTTTCGCCCAATAAAAAACGCCCCAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/4050054‑4049913

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGG  >  NC_000913/4498181‑4498320

TGATAAACATAGCGCATCAGGCATTACGGATCTTTTCTTTCCCAACAAAAAAGACGCCCCAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTAT                                                                                                                                             <  1:216863/143‑1

    AAACATAGCGCATCAGGCATTACGGATCTTTTCTTTCGCCCAATAAAAAACGCCCCAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTATAGAC                                                                                                                                         <  2:712771/143‑1

    AAACATAGCGCATCAGGCATTACGGATCTTTTCTTTCGCCCAATAAAAAACGCCCCAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGAAAAAATAGAGGTCTGAAAGATAGAACATCTTATAGAC                                                                                                                                         >  2:923726/1‑143

    AAACATAGCGCATCAGGCACTACGGATCTTTTGTTTCGCCCAATAAAAAACGCCCCAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTATAGAC                                                                                                                                         <  2:865525/143‑1

                    GCATTACGGATCTTTTCTTTCGCCCAATAAAAAACGCCCCAGTCATTACTGACTGGGGCGGCTAAAATATTGAGCCACATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGCACATCTTATAGACTGGCCCCCTGACTCac                                                                                                                         >  2:721147/1‑141

                           GGATCTTTTCTTTCGCCCAATAAAAAACGCCCCAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGACAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAA                                                                                                                  >  1:564967/1‑143

                                TTTTCTTTCGCCCGATAAAAAACGCCCCAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCGAGACAACCAAT                                                                                                             >  1:613061/1‑143

                                   gCTTTCGCCGAAGAAACTACGCCCCAGTCATTACTGACTGGGGCGGCTAAAATAGGCAGCCAAGTCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATC                                                                                                          <  2:132267/142‑1

                                    CTTTCGCCCAATAAAAGACGCCCCAGTCATTAGTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCA                                                                                                         <  1:647516/143‑1

                                    CTTTCGCCCAATAAAAAACGCCCCAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCA                                                                                                         <  1:932808/143‑1

                                    CTTTCGCCCAATAAAAAACGCCCCAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCA                                                                                                         <  1:65108/143‑1

                                     TTTCGCCCAATAAAAAACGCCCCAGTCATTACTGACTGGGGCGGCTCAAATATTCAGCCAAATCCGATTAAGATCGGAAAAAGGTCTGAAAGACAGAACACCTTATAGACTGGCCCCCTGCATCTCCACACAACCAATATCAC                                                                                                        >  2:675983/1‑143

                                     TTTCGCCCAATAAAAAACGCCCCAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCAC                                                                                                        >  1:191306/1‑143

                                     TTTCGCCCAATAAAAAACGCCCCAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATACGATTACGTGAAGTAAAAGGGCTGAAGGATAGAACGTCTAGTAGGCTGGCCCCCCGAATCTACAGACAACGAATAGCAC                                                                                                        >  1:571208/1‑143

                                       TCGCCCAATAAAAAACGCCCCAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTT                                                                                                      <  2:269945/143‑1

                                        CGCCCAATAAAAAACGCCCCAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTA                                                                                                     <  1:201354/143‑1

                                           CCAATAAAAAACGCCCCAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAAT                                                                                                  >  1:664982/1‑143

                                           CCAATAAAAAACGCCCCAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTATGAAAGAAATAGCATCTTATAGACTGGCCCCCCGACTCTCCAGACAACCAATATCACCTAAAT                                                                                                  >  2:333914/1‑143

                                            CAATAAAAAACGCCCCAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGGAAAAGGTCTGAAAGATAGAACATCTGATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACagcacta                                                                                                 >  2:943062/1‑136

                                             AATAAAAAACGCCCAAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGACTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCAAGACAACCAATATAACTGAAATAA                                                                                                >  2:307080/1‑143

                                                       GCCCCAGTCAATACTGACTGGGGCGGCTAAAATATTCAGCCAAACCCGATTACGTGAAGTAAAAGGCCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCT                                                                                      <  1:291631/143‑1

                                                        CCCCAGTCATTACTGACTGGGGCGGCTATTACATACAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTT                                                                                     <  1:396791/143‑1

                                                         CCCAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCCCTTAAATAAGTGATAGTCTTA                                                                                    >  1:312113/1‑143

                                                         CCCAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTA                                                                                    <  1:754292/143‑1

                                                         CCCAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTA                                                                                    >  1:1350/1‑143

                                                         CCCAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGGGAAGTAAAAGGTCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGGCTTA                                                                                    >  1:51791/1‑143

                                                           CAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAAT                                                                                  >  2:487117/1‑143

                                                            AGTCATGACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACACCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATA                                                                                 <  2:425828/143‑1

                                                             GTCATTACGGACTGGGGAGGCTAAAATATTCCGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATAC                                                                                <  1:701594/143‑1

                                                               cagtagTGACTGGGGCGGCTAAGATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTA                                                                              <  2:50476/137‑1

                                                                    CTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTT                                                                         >  1:627603/1‑143

                                                                     TGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTCATAGTCTTAATACTAGTTTTT                                                                        >  2:29934/1‑143

                                                                      GACTGGGGCGGCTAAAATATTCAGCCAATTCCGATTACGTGAAGTAAAAGGTCTGAAAGCAAATACATCTTATATACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTA                                                                       <  2:236546/143‑1

                                                                      GACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTA                                                                       <  1:86113/143‑1

                                                                      GACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTA                                                                       <  1:425339/143‑1

                                                                      GACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTA                                                                       <  2:331470/143‑1

                                                                         TGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGGCTTAATACTAGTTTTTAGAC                                                                    >  2:128818/1‑143

                                                                           GGGCGGCTAGAATATTCAGCCAAGTCGGAGTACGTGAAGTAAAAGGTCTGAAATATAGAACATCTTATATACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAAGAAGTGATAGTCTTAATACTAGTTTTTAGACTA                                                                  <  2:273965/143‑1

                                                                           GGGCGGCTAAGATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTCGTTTTTAGACTA                                                                  <  2:635361/143‑1

                                                                           GGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGCCAACCAACATCTCTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTA                                                                  <  1:405364/143‑1

                                                                           GGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTA                                                                  <  1:727404/143‑1

                                                                                  TAAAATATTCCGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTATATAATTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTG                                                           <  2:467855/143‑1

                                                                                  TAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTATTAATACTAGTTTTTAGACTAGTCATTG                                                           >  2:509116/1‑143

                                                                                       TATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAA                                                      <  2:757462/143‑1

                                                                                            AGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTTGAGAACAGAT                                                 >  1:468262/1‑143

                                                                                            AGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGAT                                                 <  2:709475/143‑1

                                                                                            AGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGAT                                                 >  2:351818/1‑143

                                                                                               CAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAATCATCGAAGAACAGATAAT                                              >  1:769779/1‑143

                                                                                                  ATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGA                                           <  1:487117/143‑1

                                                                                                   gCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGAT                                          <  1:648524/142‑1

                                                                                                   TCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTGATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGAT                                          >  1:916850/1‑143

                                                                                                   TCCGATGACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGAT                                          <  2:359276/143‑1

                                                                                                     CGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGGGAACAGATGATTGATGT                                        >  2:117582/1‑143

                                                                                                         TACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTA                                    <  1:923726/143‑1

                                                                                                          ACGTGAAGGAAAAGGTCTGAAAGATATAACAGCTTATAGACTGGCTCCCTGAATCTCCAGACTACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAG                                   <  2:720728/143‑1

                                                                                                           CGTGAAGTGAAAGGTCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGG                                  <  2:138062/143‑1

                                                                                                             TGAAGTAAAAGGTCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGC                                <  1:409388/143‑1

                                                                                                                 GTAAAAGGTCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGA                            <  1:603895/143‑1

                                                                                                                  TAAAAGGTCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATGTCGCTTAAATAAGTGATAGTCTTAATACTAGTCTTTAGCCTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGcg                           >  1:255488/1‑141

                                                                                                                  TAAAAGGTCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTATTACTAGTTTTTAGACTAGTCATTGCGGAACAGATCATTTATGTCTTAGGTCCGGAG                           >  2:687219/1‑143

                                                                                                                  TAAAAGGTCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAG                           >  1:159395/1‑143

                                                                                                                  TAAAAGGTCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAG                           >  1:157090/1‑143

                                                                                                                         TCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGGGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCA                    <  1:117582/143‑1

                                                                                                                         TCTGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCA                    >  1:823258/1‑143

                                                                                                                           TGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGA                  >  1:237315/1‑143

                                                                                                                           TGAAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGA                  >  2:782263/1‑143

                                                                                                                             AAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACG                <  1:322768/143‑1

                                                                                                                             AAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACG                <  1:375350/143‑1

                                                                                                                             AAAGATAGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACG                >  1:510941/1‑143

                                                                                                                                   AGAACATCTTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGGGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTCGGGCCGGAGAAACGCAGACGGCGTAC          >  2:604537/1‑143

                                                                                                                                           TTATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTCGACTAGTCATTGGAGAGCATATGATTGATGCCTCAGGGACGGAGAAACGGAGACGGCGTACCACcccgg  >  1:371904/1‑138

TGATAAACATAGCGCATCAGGCATTACGGATCTTTTCTTTCGCCCAATAAAAAACGCCCCAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/4050054‑4049913

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGG  >  NC_000913/4498181‑4498320

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.

GATK/CNVnator alignment

N/A