Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F17 I0 R1 95 78.2 1797446 84.3% 1515246 230.3

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 4,184,543 C→A 100% P1100Q (CCG→CAG)  rpoB → RNA polymerase, beta subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,184,5430CA100.0% 393.7 / ‑6.7 111P1100Q (CCG→CAG) rpoBRNA polymerase, beta subunit
Reads supporting (aligned to +/- strand):  ref base C (1/1);  new base A (53/56);  total (54/57)
Rejected as polymorphism: E-value score below prediction cutoff.
Rejected as polymorphism: Frequency below/above cutoff threshold.
Rejected as polymorphism: Variant not supported by required number of reads on each strand.

Only 100 of 111 total aligned reads displayed.

GAAACACGAGTTCGAGAAGAAACTCGAAGCGAAACGCCGCAAAATCACCCAGGGCGACGAT‑CTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTC‑AGAAAGTTGACCTGAGTACCTTCAGCGATG‑AAGAAGTTATGCGTCTGGCTGAAAACCTGCGCAA  >  NC_000913/4184307‑4184777
                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                            
gAAACACGAGTTCGAGAAGAAACTCGAAGGGAAACGGCGAAAAAGCACCCAGGGCGACGAT‑CGGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGc                                                                                                                                                                                                                                            <  1:825990/239‑1 (MQ=255)
gAAACACGAGTTCGAGAAGAAACTCGAAGCGAAGCGCCGCAAAATCACCCAGGGCGACGAG‑CTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGc                                                                                                                                                                                                                                            <  1:241848/239‑1 (MQ=255)
       gAGTTCGAGAAGAAACTCGAAGCGAAACGCCGCAAAATCACCCAGGGCGACGAT‑CTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCCGCCTGGGGACAAAATGGCAGGTCGTCACGGTAACAAGGGGGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTCAGATGAAAACGGAACGCCGGCAGACATCGTACGAAACAAGCTggggga                                                                                                                                                                                                                                     >  2:862873/1‑236 (MQ=255)
       gAGTTCGAGAAGAAACTCGAAGCGAAACGCCGCAAAATCACCCAGGGCGACGAT‑CTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGGGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATTAAAACGGTACGCCGGTCAACATCGTACTGAACCAGCTGGGCGt                                                                                                                                                                                                                                     >  1:16975/1‑239 (MQ=255)
         gTTCGAGAAGAAACTCGAAGCGAAACGCCGCAAAATCACCCAGGGCGACGAT‑CTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTa                                                                                                                                                                                                                                    <  1:645520/238‑1 (MQ=255)
         gTTCGAGAAGAAACGCGAAGCGAACAGCCGCAAAAGCACCCAGGGCTACGAT‑CGGGCACCGTGCGTGCTGAAGAGTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGGGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTa                                                                                                                                                                                                                                    <  1:381338/238‑1 (MQ=255)
            ggagaAGAAACCCGAAGGGAAACGCCCTAAACACCCCCAGGGAGACGGT‑CTGGCACCGTGCGGGCTGGAGATTTGTAATGTAGATCTGGCGGGTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGt                                                                                                                                                                                                                                <  2:229162/238‑1 (MQ=255)
            cGAGAAGAAACTCGAAGCGAAACGCCGCAAAATCCCCCAGGGCGACGAT‑CTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGt                                                                                                                                                                                                                                <  1:531186/239‑1 (MQ=255)
            cGAAAAGAAACGCGAAGCGAAACGCCGCAAAATCACCCAGGGCGACGAG‑CTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTTTCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGt                                                                                                                                                                                                                                <  1:867842/239‑1 (MQ=255)
              ggaagaaACCCGAAGCGAAACCACGCAAAAATCCCCAGGGACAGGCT‑CTGGCCCCGGGCGTTCTGAAGATTGTTAATGTATACCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGAGCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGtct                                                                                                                                                                                                                              <  2:348850/238‑1 (MQ=255)
              gaaagtaACTCGGAACGAAACGCCGGAAAATCCCCCCGGGCGGCGAT‑CTGGCACCGGGCTGGCTGAAGATTGGTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGGCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGtct                                                                                                                                                                                                                              <  1:379729/237‑1 (MQ=255)
                 agaaACTCGAAGCGAAACGCCGCAAAATCCCCCAGGGCGACGAT‑CTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGt                                                                                                                                                                                                                           <  1:82027/239‑1 (MQ=255)
                 agaaACTCGAAGCGAAACGCCGCAAAATCACCCAGGGCGACGAT‑CTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGGGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACCCCGGTCAAAATCGAACTTAACCAGCTGGGGGAACCGACTGGt                                                                                                                                                                                                                           >  2:82027/1‑239 (MQ=255)
                   aaaCTCGAAGCGAAACGCCGCAAAATCACCCAGGGCGACGAT‑CTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTAt                                                                                                                                                                                                                         >  1:516848/1‑239 (MQ=255)
                   aaaCTCGAAGCGAAACGCCGAAAAATCACCCAGGGCGACGAT‑CTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATAGCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTAt                                                                                                                                                                                                                         <  1:313952/239‑1 (MQ=255)
                      ccagcaacaaaaCCCCGGAAAATCCCCCAGGGCCGCGATGTTGGCA‑CGGGCGTGCTGAAGAGTGTTAAGGTATATCTGGCGGTTAAACTACGTAGCCAGCCGTGTGACAAGAGGGCAGGTCGTCACGGTAACAAGGGTGTAAATTCTAAGATCACCCCTATCGAAGATATTCCTTACGATGAAAACGGTACGCCGGTAGACATCTTACTGAACCAGCTGGGCGTACCGTCTCGTATGaa                                                                                                                                                                                                                      <  2:31129/230‑1 (MQ=255)
                        cGAAGCGAAACGCAGCAAACTCCCCCAGGGCGACGAT‑CTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACa                                                                                                                                                                                                                    <  1:728719/239‑1 (MQ=255)
                              gAAACGCCGCAAAATCCCCCAGGCCGACGAT‑CTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGt                                                                                                                                                                                                               <  1:852790/238‑1 (MQ=255)
                              gAAACGCCGCAAAATCACCCAGGGCGACGAT‑CTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGt                                                                                                                                                                                                               <  1:869899/238‑1 (MQ=255)
                               ggcagccgcAAAATCACCCAGGGCGACGAT‑CTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGt                                                                                                                                                                                                               <  1:419059/233‑1 (MQ=255)
                               aaaCGCCGCAAAATCACCCAGGGCGACGAT‑CTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACa                                                                                                                                                                                                                    <  2:143918/232‑1 (MQ=255)
                               aaaCGCCGCAAAATCACCCAGGGCGACGAT‑CTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACa                                                                                                                                                                                                                    >  1:143918/1‑232 (MQ=255)
                                     cgcAAAATCACCCAGGGCGACGAT‑CTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATAACTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACCTCGTACTGGACCCGCTGGGCGTACCGTCCCGTATGAACATCGGTCAGATcc                                                                                                                                                                                                        >  1:41094/1‑238 (MQ=255)
                                         aacacccccAGGGGGACGTC‑TTGGCACCGGGGGTGCTGAAGATTGTTAAGGTATACCTGGCGGTTAAACGCCGTACCCGGTCTGGTGACACGTAGGCAGGGCGTCACGGTAACAAGGGTGTAATGTCAAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTAGGAACAGCGGTCAGATCCTCgca                                                                                                                                                                                                   <  2:891443/233‑3 (MQ=255)
                                           accccccGGGGCGACTAA‑TCGGCACCGGGCTGTCGTAAGATTGTTAAGGTATAGTGGGCGGTTAAAACACGTAGCCAGCCTGGTGACAAGATGGCAGGTCGGCACGGTAACAAGGGTATAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCGCGAAAc                                                                                                                                                                                                 <  2:831348/235‑1 (MQ=255)
                                           aTCACCCAGGGCGACGAT‑CTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAc                                                                                                                                                                                                 <  2:648950/239‑1 (MQ=255)
                                               cccAGGGCGACGAT‑CTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGGGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCCGGGCGGACCGTCTCGTATAAAAATCGGGCAAATCCCCGacggtc                                                                                                                                                                                               >  2:419059/1‑232 (MQ=255)
                                               cccAGGGAGACGGT‑TTGGCACCGGGGCTTCTGTAGGTTGTTAAGGTATATCGGGGGGGTAAACGGCGTAACCAGCCTGGTAACAAGATGGCAGGTCGTCACTGTAACAAGGGTGTAATTTCGAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAACCCCAc                                                                                                                                                                                             <  2:283449/239‑1 (MQ=255)
                                                    ggCGACGAT‑CTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATAGTACTGAACAAGCTGGGCTTACCGTCTCGTATGAACATCGCTCAGATCCTCGAAACCCACCTggg                                                                                                                                                                                        >  1:768468/1‑239 (MQ=255)
                                                               tGGCACCGGGAGTGCGGAAGATTGTGAAGGTATAGCTGGCGGTTAAACGCCGTAGCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCg                                                                                                                                                                              <  2:671191/239‑1 (MQ=255)
                                                                       ggCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAggaa                                                                                                                                                                       >  1:228635/1‑236 (MQ=255)
                                                                       ggCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTa                                                                                                                                                                       >  1:105716/1‑238 (MQ=255)
                                                                       ggCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGGGGAATTTCTAAGATCAACCCGATCGAAGCTATGCCTTACGATGAAAACGGTACGCCGGTAGCCATCGTACTGAACCAGCTGGGCGTACCGTCCCGAATGAACATCGGTCAGATCCCCGAAACCCACCTGGGTATGGCTGGGAAAGGAAt                                                                                                                                                                      >  2:853740/1‑239 (MQ=255)
                                                                           tGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGAATGGCTGGCAAAGGGAGCGGc                                                                                                                                                                  >  1:323793/1‑239 (MQ=255)
                                                                               gAAGATTTTTAATTTTTATTTGGCGGTTAAACTCCGTGTCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACa                                                                                                                                                              <  2:305144/239‑1 (MQ=255)
                                                                               gAAGATTTTTAAGGTATAGCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGAc                                                                                                                                                               <  1:738683/238‑1 (MQ=255)
                                                                                         aaGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGc                                                                                                                                                    <  1:271565/239‑1 (MQ=255)
                                                                                         aaGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGc                                                                                                                                                    <  1:493032/239‑1 (MQ=255)
                                                                                          aGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGGATCGGCGACAAGCTCAACGcc                                                                                                                                                   >  1:812229/1‑239 (MQ=255)
                                                                                                 tCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTAAGATCCCCGAAACCAACCTGGGGTTGGCCGGGAAAGGGATTCGCGACAAGATaaaacccactctca                                                                                                                                            >  2:493032/1‑228 (MQ=255)
                                                                                                      cGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGCTATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGCCTCGTATGAACATCGGTAGGATCCTCGAAACCCACCCGGGAATGGCTGCGAAAGGGATCGGCGCAAAAATCCACGCCATGGTGaaaacg                                                                                                                                       >  1:215614/1‑236 (MQ=255)
                                                                                                                   tATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGGATCGGCGCCAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTcc                                                                                                                          >  1:77559/1‑238 (MQ=255)
                                                                                                                   tATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGAATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTc                                                                                                                           >  1:829836/1‑238 (MQ=255)
                                                                                                                   tATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGAATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTc                                                                                                                           >  1:820242/1‑238 (MQ=255)
                                                                                                                      ccccccgggTGACAAGTTTGAAGGTCGTAAGGGTAAACAGGGTGAAATTTGAAAGATCAACCCGATCGAATATAGGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGACTCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCGCCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGa                                                                                                                       <  2:241572/232‑1 (MQ=255)
                                                                                                                          ccTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGc                                                                                                                                                                                                                                            >  1:347646/1‑118 (MQ=255)
                                                                                                                          ccTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCCAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGc                                                                                                                                                                                                                                            <  2:347646/118‑1 (MQ=255)
                                                                                                                             ggTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTgcg                                                                                                                <  2:516848/239‑1 (MQ=255)
                                                                                                                             ggTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACACAAGCAAGAAGTCGCGAAAcgccc                                                                                                                >  1:294257/1‑235 (MQ=255)
                                                                                                                              gTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGGATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCCAGAAGCGCCGAAACTgcgc                                                                                                               >  1:497010/1‑239 (MQ=255)
                                                                                                                              gTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGGATCGGCGAAAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTGCGGAAACAgcgc                                                                                                               >  2:712746/1‑239 (MQ=255)
                                                                                                                                     gATGGCAGGTCGGCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGGGAAAGGAAGCGGCGGCCAGAACAACCCCCTGCGGAAACAACAGCCAAAAATCCCGAAACCGCGAGAATTc                                                                                                         >  2:494736/1‑238 (MQ=255)
                                                                                                                                        ggCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCCCCTGGGAATGGCTGGGAAAGGTATCGGGGGCAAGATCAACGCCATGCGTAAAAAGCAGCAAAAAGACCCGAAAACGCGCGAATTccacc                                                                                                     >  2:21693/1‑235 (MQ=255)
                                                                                                                                        ggCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGGATGGCTCCGAAAAGACTCGGGCACAAAGTCAACCCCATGCTGAAAACGCAGCAAAAAACCCGGAAAATGCCCGaactaaacc                                                                                                     >  2:888151/1‑232 (MQ=255)
                                                                                                                                             gtcgtcACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAgcgt                                                                                                >  1:325688/1‑239 (MQ=255)
                                                                                                                                             gtcgtcACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAgcg                                                                                                 <  1:19887/238‑1 (MQ=255)
                                                                                                                                              tcgtcCCGGTAACAAGGGTGTAATTTCTAAAATCAACCCGATCGAAGAAATGCCTTACGATGAAAACGGGACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAgc                                                                                                  <  2:228635/236‑1 (MQ=255)
                                                                                                                                                  cACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTa                                                                                           <  1:154338/239‑1 (MQ=255)
                                                                                                                                                             gggTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTa                                                                                                                                                                                                                                    <  1:346497/91‑1 (MQ=255)
                                                                                                                                                             gggTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCATACTGAACCAGCTGGGCGTa                                                                                                                                                                                                                                    >  2:346497/1‑91 (MQ=255)
                                                                                                                                                               gtgtAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGgc                                                                                 >  1:82453/1‑236 (MQ=255)
                                                                                                                                                               gtgtAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCACGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGGGCGTACGCTCTGGgcgcg                                                                              >  1:781144/1‑238 (MQ=255)
                                                                                                                                                                 gtAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGAATCGGGGCCAAGATCAACCCCATGCTGAACAAGCCACAAGAAATCGCGAAACTGCGCGAATTCATCCAACGAGCGGACGAAATGGGGGGTGa                                                                            >  2:424038/1‑239 (MQ=255)
                                                                                                                                                                  tAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTAATCCACCGTGCGTACGATCTGGGCGCTGAc                                                                           >  1:184775/1‑239 (MQ=255)
                                                                                                                                                                   aaTTTCTAAGACTAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGCCATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACg                                                                          <  2:603279/239‑1 (MQ=255)
                                                                                                                                                                    aTTTCTAAGATCAACCCGATCGAAGATATGCCTTAAGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGt                                                                         <  1:212419/239‑1 (MQ=255)
                                                                                                                                                                     tttCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTAGGATCTGGGGGCTGACGtt                                                                        >  1:824404/1‑239 (MQ=255)
                                                                                                                                                                          aaGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTC‑a                                                                  <  1:67466/239‑1 (MQ=255)
                                                                                                                                                                                 aCCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTC‑AGAAAGtt                                                           <  1:554924/239‑1 (MQ=255)
                                                                                                                                                                                  cccGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGGATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTAATCCAGCGTGAGGACGAACTGGGGGCTGACGTTGGTC‑AGAACGTTg                                                          >  1:491752/1‑239 (MQ=255)
                                                                                                                                                                                    ccaTCGAAGATATGCCTTACGAGTAAAACGGTACGCCGGTAAACACCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTC‑AGAAAGTTGAc                                                        <  2:464407/237‑1 (MQ=255)
                                                                                                                                                                                    cGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTC‑AGAAAGTTGAc                                                        <  1:424038/239‑1 (MQ=255)
                                                                                                                                                                                     gaactagaatatGCCTTACGGTGAAAACGGTACGCCGGTATACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCCCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTC‑AGAAAGTTGAcc                                                       <  1:560527/231‑1 (MQ=255)
                                                                                                                                                                                       tCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGCATCGGCGACACGATCAACGCCATGCTGAACACGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGACCTGGGCGCTCAAGTTGGTC‑AGAAAGTTGaacgg                                                     >  2:417357/1‑235 (MQ=255)
                                                                                                                                                                                        cGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGCCGTTCGTC‑AGAAAGTTGACCTgc                                                    >  1:759291/1‑238 (MQ=255)
                                                                                                                                                                                          aaGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTC‑CGAAAGTTGACCTGAGt                                                  >  1:541104/1‑239 (MQ=255)
                                                                                                                                                                                                tGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGACATCATCCAGCGGGCGGACGAACTGGGCGCTGACGTTCGTC‑GGAAAATTGACCCGAGGAcccta                                            >  2:105261/1‑236 (MQ=255)
                                                                                                                                                                                                 gCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGgcgc                                                                               <  2:379144/204‑1 (MQ=255)
                                                                                                                                                                                                 gCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCCCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGAATGGCTGCGAAATGGATCGGCGACAAGATCAACGCCATGCTGACACAGAAGCAAGAAGTCGCCAAACTCCGCGAATTCATCCAGAGTGCGTACGATCTGGGGGCTGACGTTCGGC‑AGAAAATTGACCTGATGACATTCa                                           >  2:630978/1‑239 (MQ=255)
                                                                                                                                                                                                    ttACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTC‑AGAAAGTTGACCTGAGTACCTTCAGCg                                        <  1:417511/239‑1 (MQ=255)
                                                                                                                                                                                                     ttcGATGAAAACGGGACGCCGGTAGACATCGGACGTACCCAGCGTGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTC‑AGAAAGTTGACCTGAGTACCTTCAGCGa                                       <  2:294257/237‑1 (MQ=255)
                                                                                                                                                                                                     tACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGCAGTCGCGAAACTGCGCGAATTCATCCACCGTGCGTACGATCTGGGCGCTGACGTTCGTC‑AGAAAGTTGACCTGAGTACCTTCAGCgc                                       >  1:330875/1‑238 (MQ=255)
                                                                                                                                                                                                     tACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTC‑AGAAAGTTGACCTGCGTACCTTCAGc                                         >  1:441471/1‑237 (MQ=255)
                                                                                                                                                                                                     tACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTC‑ACAAAGTTGACCTGAGAACCTTCAACgg                                       >  2:417511/1‑238 (MQ=255)
                                                                                                                                                                                                     tACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGACGCGAAACTGCGCGAATTCATCCAGCGTGCGTCCGGTCTGGGCCGTGACGGTCGTCGAGAATG‑TGACCTGAGTACCTTCAGCGa                                       >  2:645429/1‑239 (MQ=255)
                                                                                                                                                                                                       cggttaaaaCGGTTCGCCGTTAGACATCGTACTGAACCAGCTGGGCGTTCCGTCTCGTATGAACCTCGGTCAGATCCTCGAAACCCACCTGGGTAAGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTC‑AGAAAGTTGACCTGAGTACCTTCAGCGATg                                     <  2:82453/234‑1 (MQ=255)
                                                                                                                                                                                                         aTGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTC‑AGAAAGTTGACCTGAGTACCTTCAGCGATg‑aa                                  <  1:395775/239‑1 (MQ=255)
                                                                                                                                                                                                          tGAAAACGGTCCGCCGGTACACCTCGTACTGAACCAGCTGGGCGTTCCGTTTCGTATGAACAGCGGTCAGTACCTCGAAACCCCCCTTGGTATGGCTTCGAAAGGTATCGGTGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTC‑AGAAAGTTGACCTGAGTACCTTCAGCGATg‑aag                                 <  2:275852/239‑1 (MQ=255)
                                                                                                                                                                                                          tGAAAACGGTACCCCGGTTGACCGCGTACTGAACCAGCTGGGGGTACCGGCTCCGATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCCGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTC‑AGAAAGTTGACCTGAGTACCTTCAGCGATg‑aa                                  <  2:184775/238‑1 (MQ=255)
                                                                                                                                                                                                            aaaaCGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGAATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGGCCTGACGTTCGTC‑CGAAAGTTCACCTGAGGACCTTCAGCGATg‑acgaa                               >  1:831201/1‑239 (MQ=255)
                                                                                                                                                                                                                        cGGGAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTC‑AGAAAGTTGACCTGAGTACCTTCAGCGATG‑AAGAAGTTATGCGTCt                    <  1:8075/238‑1 (MQ=255)
                                                                                                                                                                                                                           tAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCAGCGACAAGATAAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGGGCTGACGTTCGCC‑AGACAGTTGACCTGAGGACCTTCAGCAATG‑AAGAAGATAATCGTCTgggt                >  2:71160/1‑237 (MQ=255)
                                                                                                                                                                                                                                  cGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCCGGGCGCCGACGTTCGTC‑AGAAAGTTGACCTGAGTACCTTCTGCGATG‑AAGAAGTTATGCCTCTGGCTGAAAAc          >  2:668690/1‑238 (MQ=255)
                                                                                                                                                                                                                                     aCTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTC‑AGAAAGTTGACCTGAGTACCTTCAGCGATG‑AAGAAGTTATGCGTCTGGCTGAAAACCTg       >  1:415690/1‑238 (MQ=255)
                                                                                                                                                                                                                                      cTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTC‑AGAAAGTTGACCTGAGTACCTTCAGCGATG‑AAGAAGTTATGCGTCTGGCTGAAAACCTgcg     <  1:862873/239‑1 (MQ=255)
                                                                                                                                                                                                                                        gAACGCGCTGGGTGTTCCCTTCCGTATGAACGTCGGTCAGATCCAGCAAAACCACCTGGGTATGGCTGAGAAAGGTTTCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGAGCTGGGCGCTGACGTTCGTC‑AGAAAGTTGACCTGAGTACCTTCAGCGATG‑AAGAAGTTATGCGTCTGGCTGAAAACCTGCGCa   <  2:105716/239‑1 (MQ=255)
                                                                                                                                                                                                                                        gAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTC‑AGAAAGTTGACCTGAGTACCTTCAGCGATG‑AAGAAGTTATGCGTCTGGCTGAAAACCTGCGCa   <  1:21693/239‑1 (MQ=255)
                                                                                                                                                                                                                                        gAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTC‑AGAAAGTTGACCTGAGTACCTTCAGCGATG‑AAGAAGTTATGCGTCTGGCTGAAAACCTGCGCa   <  1:736382/239‑1 (MQ=255)
                                                                                                                                                                                                                                         aaCCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTC‑AGAAAGTTGACCTGAGTACCTTCAGCGATG‑AAGAAGTTATGCGTCTGGCTGAAAACATGCGCaa  >  1:446945/1‑239 (MQ=255)
                                                                                                                                                                                                                                         aaCCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCAGGCTGAAACAGCAGCAAGAAGTCGCGAAAATGCGTGAATTCATCCAGCGTGCGTAGGATCTGGGCGCGGAGTTTCCTC‑AGCAAATGTACCTAGGTACCTT‑AGTCCTGTAAAAAGTTAAGCGTCGGGCTGAAAACCTGCGaaa  >  2:23626/1‑239 (MQ=255)
                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                            
GAAACACGAGTTCGAGAAGAAACTCGAAGCGAAACGCCGCAAAATCACCCAGGGCGACGAT‑CTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTC‑AGAAAGTTGACCTGAGTACCTTCAGCGATG‑AAGAAGTTATGCGTCTGGCTGAAAACCTGCGCAA  >  NC_000913/4184307‑4184777

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A