Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate | Predicted Mutations | Mean Coverage | Total Reads | Percent Mapped | Mapped Reads | Average Read Length |
|---|---|---|---|---|---|---|
| A5 F1 I2 R1 | 772 | 77.0 | 3769570 | 91.6% | 3452926 | 105.3 |
Breseq alignment
| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,299,999 | G→A | A12T (GCC→ACC) | yhbQ → | GIY‑YIG nuclease superfamily protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,299,999 | 0 | G | A | 100.0% | 280.1 / NA | 85 | A12T (GCC→ACC) | yhbQ | GIY‑YIG nuclease superfamily protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (46/39); total (46/39) | |||||||||||
AACATGTTGTTTTGCCAGCCAACGGCTGATGGCGATGAGTGTTTCCATTGCTGTTCTCTTTTA‑TACTGTGGGCCTGACCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCGCCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCGCTATCAGCAGCACCAAAGCGGCAAAGGGGCGAAAGCACTGCGCGGGAAAGGAGAACTAACGCTGGTGTTTTCCGCGCCAGTGGGCGATC > NC_000913/3299868‑3300134 | aactgttggttTGGCAAGCAAACGGCTGATGGCGATGATGTTTTCCATTGC‑GTTCTCTTTTATTACTTTGGGCCTAACCTTAAAAGGCG‑CGGAGAACAATG‑CCCCCTGGTTTCTTTACTTGATCCGTACCACCGACAAt < 1:257438/131‑1 (MQ=255)aacaTGTTGTTTTGCCAGCCAACGGCTGATGGCGATGAGTGTTTCCATTGCTGTTCTCTTTTA‑TACTGTGGGCCTGACCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACaa > 2:421876/1‑139 (MQ=255)aacaTGTTGTTTTGCCAGCCAACGGCTGATGGCGATGAGTGTTTCCATTGCTGTTCTCTTTTA‑TACTGTGGGCCTGACCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACaa > 1:1148207/1‑139 (MQ=255)aacaTGTTGTTTTGCCAGCCAACGGCTGATGGCGATGAGTGTTTCCATTGCTGTTCTCTTTTA‑TACTGTGGGCCTGACCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACaa > 1:1696784/1‑139 (MQ=255) acaTGTTGTTTTGCCAGCCAACGGCTGATGGCGATGAGTGTTTCCATTGCTGTTCTCTTTTA‑TACTGTGGGCCTGACCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAAt < 2:758844/139‑1 (MQ=255) caTGTTGTTTTGCCAGCCAACGGCTGATGGCGATGAGTGTTTCCATTGCTGTTCTCTTTTA‑TACTGTGGGCCTGACCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATa > 1:1023001/1‑139 (MQ=255) caTGTTGTTTTGCCAGCCAACGGCTGATGGCGATGAGTGTTTCCATTGCTGTTCTCTTTTA‑TACTGTGGGCCTGACCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATa < 2:1501937/139‑1 (MQ=255) gttgttTTGCCAGCCAACGGCTGATGGCGATGAGTGTTTCCATTGCTGTTCTCTTTTA‑TACTGTGGGCCTGACCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGc > 1:66557/1‑139 (MQ=255) ttgttTTGCCAGCCAACGGCTGATGGCGATGAGTGTTTCCATTGCTGTTCTCTTTTA‑TACTGTGGGCCTGACCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCt > 2:209326/1‑139 (MQ=255) ttgttTTGCCAGCCAACGGCTGATGGCGATGAGTGTTTCCATTGCTGTTCTCTTTTA‑TACTGTGGGCCTGACCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCt < 2:827548/139‑1 (MQ=255) ttGCCAGCCAACGGCTGATGGCGATGAGTGTTTCCATTGCTGTTCTCTTTTA‑TACTGTGGGCCTGACCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTtata < 2:1023001/139‑1 (MQ=255) gccagccaACGGCTGATGGCGATGAGTGTTTCCATTGCTGTTCTCTTTTA‑TACTGTGGGCCTGACCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATAcc > 2:341038/1‑139 (MQ=255) cagccaACGGCTGATGGCGATGAGTGTTTCCATTGCTGTTCTCTTTTA‑TACTGTGGGCCTGACCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCgg < 1:209326/139‑1 (MQ=255) ccaACGGCTGATGGCGATGAGTGTTTCCATTGCTGTTCTCTTTTA‑TACTGTGGGCCTGACCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCggg > 2:1127041/1‑137 (MQ=255) ccaACGGCTGATGGCGATGAGTGTTTCCATTGCTGTTCTCTTTTA‑TACTGTGGGCCTGACCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCggg < 1:1127041/137‑1 (MQ=255) ggCTGATGGCGATGAGTGTTTCCATTGCTGTTCTCTTTTA‑TACTGTGGGCCTGACCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTATTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATcacca < 2:1258377/139‑1 (MQ=255) tgtTTCCATTGCTGTTCTCTTTTA‑TACTGTGGGCCTGACCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAAt < 2:443462/101‑1 (MQ=255) tgtTTCCATTGCTGTTCTCTTTTA‑TACTGTGGGCCTGACCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAAt > 1:443462/1‑101 (MQ=255) tttCCATTGCTGTTCTCTTTTA‑TACTGTGGGCCTGACCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCt > 1:1297421/1‑104 (MQ=255) tttCCATTGCTGTTCTCTTTTA‑TACTGTGGGCCTGACCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCt < 2:1297421/104‑1 (MQ=255) ttGCTGTTCTCTTTTA‑TACTGTGGGCCTGACCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCGCTATcagc < 1:421876/139‑1 (MQ=255) gCTGTTCTCTTTTA‑TACTGTGGGCCTGACCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATcac > 2:422402/1‑111 (MQ=255) gCTGTTCTCTTTTA‑TACTGTGGGCCTGACCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATcac < 1:422402/111‑1 (MQ=255) gCTGTTCTCTTTTA‑TACTGTGGGCCTGACCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCGCTATcagcag > 1:665127/1‑139 (MQ=255) gCTGTTCTCTTTTA‑TACTGTGGGCCTGACCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCGCTATcagcag > 1:1526611/1‑139 (MQ=255) ttCTCTTTTA‑TACTGTGGGCCTGACCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAAt < 1:1259563/87‑1 (MQ=255) ttCTCTTTTA‑TACTGTGGGCCTGACCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAAt > 2:1259563/1‑87 (MQ=255) ttA‑TACTGTGGGCCTGACCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCGCTATCAGCAGCACCAAAGCgg > 1:1532571/1‑139 (MQ=255) tgtgGGCCTGACCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACgg < 2:426678/99‑1 (MQ=255) tgtgGGCCTGACCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACgg > 1:426678/1‑99 (MQ=255) tgtgGGCCTGACCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCGCTATCAGCAGCACCAAAGCGGCAAAgg < 2:1696784/139‑1 (MQ=255) tgtgGGCCTGACCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCGCTATCAGCAGCACCAAAGCGGCAAAgg > 1:875937/1‑139 (MQ=255) tgGGCCTGACCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCGCTATCAGCAGCACCAAAGCGGCAAAgggg > 1:407673/1‑139 (MQ=255) tgGGCCTGACCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCGCTATCAGCAGCACCAAAGCGGCAAAgggg > 2:946879/1‑139 (MQ=255) ggCCTGACCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAAt > 1:1610584/1‑70 (MQ=255) ggCCTGACCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAAt < 2:1610584/70‑1 (MQ=255) ggCCTGACCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCGCTATCAGCAGCACCAAAGCGGCAAAGGGGCg > 2:1010017/1‑139 (MQ=255) gCCTGACCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCGCTATCAGCAGCACCAAAGCGGCAAAGGGGCGa > 1:892347/1‑139 (MQ=255) cTGACCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCt > 2:1513507/1‑72 (MQ=255) cTGACCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCt < 1:1513507/72‑1 (MQ=255) cTGACCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCggg > 2:1265406/1‑82 (MQ=255) cTGACCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCggg < 1:1265406/82‑1 (MQ=255) tGACCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCGCTATCAGCAGCACCAAAGCGGCAAAGGGGCGAAAg < 2:407673/139‑1 (MQ=255) aCCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACa > 2:153861/1‑62 (MQ=255) aCCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACa < 1:153861/62‑1 (MQ=255) aCCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGaa > 2:1844469/1‑97 (MQ=255) aCCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGaa < 1:1844469/97‑1 (MQ=255) aCCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCGCTATCAGCAGCACCAAAGCGGCAAAGGGGCGAAAGCa < 2:1852969/139‑1 (MQ=255) aCCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCGCTATCAGCAGCACCAAAGCGGCAAAGGGGCGAAAGCa < 1:341038/139‑1 (MQ=255) aCCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCGCTATCAGCAGCACCAAAGCGGCAAAGGGGCGAAAGCa > 1:1852969/1‑139 (MQ=255) ttAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCGCTATCAGCAGCACCAAAGCGGCAAAGGGGCGAAAGCACTg < 1:1010017/139‑1 (MQ=255) aaCATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCGCTATcag < 2:1298750/104‑1 (MQ=255) aaCATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCGCTATcag > 1:1298750/1‑104 (MQ=255) gCGACGCAG‑ACGATGACTCCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCGCTATCAGCAGCACCAAAGCGGCAAAGGGGCGAAAGCACTGCGCGGGa > 2:1175191/1‑139 (MQ=255) gCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACgg < 2:1073607/79‑1 (MQ=255) gCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACgg > 1:1073607/1‑79 (MQ=255) gCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAAcg < 1:841992/89‑1 (MQ=255) gCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAAcg > 2:841992/1‑89 (MQ=255) gCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCGC‑‑TCAGCAGCACCAAAGCGGCAAAGGGGCGAAAGCACTGCGCGGGaaa > 1:1022484/1‑139 (MQ=255) cGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCGCTATCAGCAGCACCAAAGCGGCAAAGGGGCGAAAg > 2:613206/1‑126 (MQ=255) cGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCGCTATCAGCAGCACCAAAGCGGCAAAGGGGCGAAAg < 1:613206/126‑1 (MQ=255) cGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCGCTATCAGCAGCACCAAAGCGGCAAAGGGGCGAAAGCACTGCGCGGGaa > 1:1057484/1‑139 (MQ=255) cGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCGCTATCAGCAGCACCAAAGCGGCAAAGGGGCGAAAGCACTGCGCGGGaa > 2:934378/1‑139 (MQ=255) aCGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCGCTATCAGCAGCACCAAAGCGGCaaa < 1:1420892/114‑1 (MQ=255) aCGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCGCTATCAGCAGCACCAAAGCGGCaaa > 2:1420892/1‑114 (MQ=255) gACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCGCTATCAGCAGCACCAAAGCGGCAAAGGGGCGAAAGCACTGCGCGGGAAAGGAGAACTAACg < 2:1532571/139‑1 (MQ=255) gACACCCTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCGCTATCAGCAGCACCAAAGCGGCAAAGGGGCGAAAGCACTGCGCGGGAAAGGAGAACTAACg < 2:892347/139‑1 (MQ=255) ccTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCGCTATCAGCAGCACCAAAGCGGCaaa < 1:655051/98‑1 (MQ=255) ccTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCGCTATCAGCAGCACCAAAGCGGCaaa > 2:655051/1‑98 (MQ=255) ccTGGTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCGCTATCAGCAGCACCAAAGCGGCAAAGGGGCGAAAGCACTGCGCGGGAAAGGAGAACTAACGCTGgt > 1:1590878/1‑139 (MQ=255) gTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCGCTATcag < 1:925875/76‑1 (MQ=255) gTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCGCTATcag > 2:925875/1‑76 (MQ=255) gTTTCTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCGCTATCAGCAGCACCAAAGCGGCAAAGGGGCGAAAGCACTGCGCGGGAAAGGAGAACTAACGCTGGTGttt > 2:1853729/1‑139 (MQ=255) cTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCGCTATCAGCAGCACCAAAGCGGCAAAGGGGCGAAAGCACTGCGCGGGAAAGGAGAACTAACGCTGgt > 2:1096658/1‑131 (MQ=255) cTTTACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCGCTATCAGCAGCACCAAAGCGGCAAAGGGGCGAAAGCACTGCGCGGGAAAGGAGAACTAACGCTGgt < 1:1096658/131‑1 (MQ=255) tttACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCGCTATCAGCAGCACCAAAGCGGCAAAGGGGCGAAAGCACTGCGCGGGAAAGGAGAACTAACGCTGGTGTTTTCcgc > 1:1469199/1‑139 (MQ=255) ttACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACgg > 2:1141914/1‑50 (MQ=255) ttACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACgg < 1:1141914/50‑1 (MQ=255) ttACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAAc < 1:53985/59‑1 (MQ=255) ttACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAAc > 2:53985/1‑59 (MQ=255) ttACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCGCTATCAGCAGCACCAAAGCGGCAAAGGGGCGAAAGCACTGCGCGGGAAAGGAGAACTAACGCTGGTGTTTTCcgcg < 2:665127/139‑1 (MQ=255) tACTTGATCCGTACCACCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCGCTATCAGCAGCACCAAAGCGGCAAAGGGGCGAAAGCACTGCGCGGGAAAGGAGAACTAACGCTGGTGTTTTCCgcgc < 2:1526611/139‑1 (MQ=255) ccGTACCACCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCGCTATCAGCAGCACCAAAGCGGCAAAGGGGCGAAAGCACTGCGCGGGAAAGGAGAACTAACGCTGGTGTTTTCCGCGCCAGTGGGc > 2:962395/1‑139 (MQ=255) tACCACCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCGCTATCAGCAGCACCAAAGCGGCaaa < 1:1621653/76‑1 (MQ=255) tACCACCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCGCTATCAGCAGCACCAAAGCGGCaaa > 2:1621653/1‑76 (MQ=255) accaccGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCGCTATCAGCAGCACCAAAGCGGCAAAGGGGCGAAAGCACTGCGCGGGAAAGGAGAAc < 2:1544855/106‑1 (MQ=255) accaccGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCGCTATCAGCAGCACCAAAGCGGCAAAGGGGCGAAAGCACTGCGCGGGAAAGGAGAACTAACGCTGGTGTTTTCCGCGCCAGTGGGCGATc > 2:1882864/1‑139 (MQ=255) | AACATGTTGTTTTGCCAGCCAACGGCTGATGGCGATGAGTGTTTCCATTGCTGTTCTCTTTTA‑TACTGTGGGCCTGACCTTAACATGCGACGCAG‑ACGATGACACCCTGGTTTCTTTACTTGATCCGTACCGCCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCGCTATCAGCAGCACCAAAGCGGCAAAGGGGCGAAAGCACTGCGCGGGAAAGGAGAACTAACGCTGGTGTTTTCCGCGCCAGTGGGCGATC > NC_000913/3299868‑3300134 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |