Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A6 F1 I2 R1	758	59.3	2864096	93.9%	2689386	105.7

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,800,475	G→A	110 (TAG→TAA)	ygaM →	putative membrane‑anchored DUF883 family ribosome‑binding protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,800,475	0	G	A	100.0%	231.2 / NA	72	110 (TAG→TAA)	ygaM	putative membrane‑anchored DUF883 family ribosome‑binding protein
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (33/39); total (33/39)

GTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTGGGTACAGCAGCTGCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTTGCT  >  NC_000913/2800344‑2800607

gTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTGGGTACAGCAGCTGCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAATGC‑aaaa                                                                                                                               <  2:1231333/139‑1 (MQ=255)

gTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTGGGTACAGCAGCTGCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCATAATGC‑aaaa                                                                                                                               <  1:185522/139‑1 (MQ=255)

gTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTGGGTACAGCAGCTGCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCATAATGC‑aaaa                                                                                                                               >  2:185522/1‑139 (MQ=255)

  ccAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTGGGTACAGCAGCTGCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAATGC‑AAAAAt                                                                                                                             <  1:1023458/139‑1 (MQ=255)

  ccAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTGGGTACAGCAGCTGCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAATGC‑AAAAAt                                                                                                                             <  2:1050144/139‑1 (MQ=255)

   cAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTGGGTACAGCAGCTGCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAATGC‑AAAAATg                                                                                                                            <  2:830954/139‑1 (MQ=255)

                          tGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTGGGTACAGCAGCTGCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAATGC‑aaaaa                                                                                                                              >  2:598061/1‑114 (MQ=255)

                          tGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTGGGTACAGCAGCTGCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAATGC‑aaaaa                                                                                                                              <  1:598061/114‑1 (MQ=255)

                                cgcgGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTGGGTACAGCAGCTGCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTg                                                                                                        <  1:250269/130‑1 (MQ=255)

                                cgcgGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTGGGTACAGCAGCTGCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTg                                                                                                        >  2:250269/1‑130 (MQ=255)

                                  cgGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTGGGTACAGCAGCTGCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGcc                                                                                             <  1:178061/139‑1 (MQ=255)

                                               tCGTGAAAGACCCTGGTGTAGCGTGGGTACAGCAGCTGCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGtt                                                                                >  2:1046477/1‑139 (MQ=255)

                                                   gAAAGACCCTGGTGTAGCGTGGGTACAGCAGCTGCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAATGC‑AAAAATGATAATAAATAcg                                                                                                                <  1:802210/103‑1 (MQ=255)

                                                   gAAAGACCCTGGTGTAGCGTGGGTACAGCAGCTGCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAATGC‑AAAAATGATAATAAATAcg                                                                                                                >  2:802210/1‑103 (MQ=255)

                                                            tGGTGTAGCGTGGGTACAGCAGCTGCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTgg                                                                   >  2:1208296/1‑139 (MQ=255)

                                                                       gggTACAGCAGCTGCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACaaa                                                        <  2:201988/139‑1 (MQ=255)

                                                                        ggTACAGCAGCTGCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAATGC‑a                                                                                                                                  >  1:1334474/1‑64 (MQ=255)

                                                                        ggTACAGCAGCTGCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAATGC‑a                                                                                                                                  <  2:1334474/64‑1 (MQ=255)

                                                                                  cTGCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGAccc                                                                                                    >  2:311976/1‑84 (MQ=255)

                                                                                  cTGCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGAccc                                                                                                    <  1:311976/84‑1 (MQ=255)

                                                                                  cTGCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATAACAAAAATCCCCCTAc                                             >  1:1129755/1‑139 (MQ=255)

                                                                                   tGCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCtt                                                                            <  1:614216/107‑1 (MQ=255)

                                                                                   tGCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCtt                                                                            >  2:614216/1‑107 (MQ=255)

                                                                                    gCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAATGC‑AAAAATGa                                                                                                                           >  2:151713/1‑59 (MQ=255)

                                                                                    gCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAATGC‑AAAAATGa                                                                                                                           <  1:151713/59‑1 (MQ=255)

                                                                                    gCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTAccc                                           >  2:526289/1‑139 (MQ=255)

                                                                                       gtaggtaTTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAATGC‑aaaa                                                                                                                               >  1:252768/1‑52 (MQ=255)

                                                                                       gtaggtaTTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAATGC‑aaaa                                                                                                                               <  2:252768/52‑1 (MQ=255)

                                                                                       gtaggtaTTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGt                                        >  2:1373593/1‑139 (MQ=255)

                                                                                         aggtaTTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCa                                      <  1:526289/139‑1 (MQ=255)

                                                                                         aggtaTTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCa                                      <  1:1373593/139‑1 (MQ=255)

                                                                                                   aTCGGCGCACTGTTAAGCATGCGCAAATCGTAATGC‑AAAAATGATAATTAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATc                            <  1:8792/139‑1 (MQ=255)

                                                                                                    tCGGCGCACTGTTAAGCATGCGCAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCt                                                                                        >  1:974521/1‑78 (MQ=255)

                                                                                                    tCGGCGCACTGTTAAGCATGCGCAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATcc                           >  2:1158191/1‑139 (MQ=255)

                                                                                                    tCGGCGCACTGTGAAGCATGCGCAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCt                                                                                        <  2:974521/78‑1 (MQ=255)

                                                                                                      ggCGCACTGTTAAGCATGCGCAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTc                                 <  1:259862/131‑1 (MQ=255)

                                                                                                      ggCGCACTGTTAAGCATGCGCAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTc                                 >  2:259862/1‑131 (MQ=255)

                                                                                                        cgcACTGTTAAGCATGCGCAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAggg                       >  1:1258929/1‑139 (MQ=255)

                                                                                                                  aGCATGCGCAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGAc             <  1:1158191/139‑1 (MQ=255)

                                                                                                                   gCAAGCGCAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGAcc            <  2:1352619/139‑1 (MQ=255)

                                                                                                                      tGCGCAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACt         <  2:456625/139‑1 (MQ=255)

                                                                                                                       gcgcAAATCGTAATGCAAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATc                            >  1:137909/1‑120 (MQ=255)

                                                                                                                       gcgcAAATCGTAATGCAAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTACTTTTCGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATc                            <  2:137909/120‑1 (MQ=255)

                                                                                                                       gcgcAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCttt                                                                                                         >  1:187626/1‑42 (MQ=255)

                                                                                                                       gcgcAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCttt                                                                                                         <  2:187626/42‑1 (MQ=255)

                                                                                                                       gcgcAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAAt                                                              <  2:552383/85‑1 (MQ=255)

                                                                                                                       gcgcAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAAt                                                              >  1:552383/1‑85 (MQ=255)

                                                                                                                       gcgcAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACaaa                                                        >  1:1162239/1‑91 (MQ=255)

                                                                                                                       gcgcAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACaaa                                                        <  1:644314/91‑1 (MQ=255)

                                                                                                                       gcgcAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACaaa                                                        >  2:644314/1‑91 (MQ=255)

                                                                                                                       gcgcAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCa                                      <  1:1131837/109‑1 (MQ=255)

                                                                                                                       gcgcAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCa                                      >  2:1131837/1‑109 (MQ=255)

                                                                                                                       gcgcAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTc                                 >  2:1365726/1‑114 (MQ=255)

                                                                                                                       gcgcAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTc                                 >  2:1421354/1‑114 (MQ=255)

                                                                                                                       gcgcAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTc                                 <  1:1421354/114‑1 (MQ=255)

                                                                                                                       gcgcAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTc                                 <  1:1365726/114‑1 (MQ=255)

                                                                                                                       gcgcAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTa        >  2:1160006/1‑139 (MQ=255)

                                                                                                                       gcgcAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTa        >  1:544444/1‑139 (MQ=255)

                                                                                                                       gcgcAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTGTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTa        >  2:464153/1‑139 (MQ=255)

                                                                                                                       gcgcAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGCCTTCGGGGTTTCTTTTTGCCTGGTGAATCACaaa                                                        <  2:1162239/91‑1 (MQ=255)

                                                                                                                        cgcAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTAt       <  1:1046477/139‑1 (MQ=255)

                                                                                                                        cgcAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTAt       <  2:1258929/139‑1 (MQ=255)

                                                                                                                        cgcAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTAt       <  1:1208296/139‑1 (MQ=255)

                                                                                                                         gcAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCt                                                                                        >  2:1115348/1‑57 (MQ=255)

                                                                                                                         gcAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCt                                                                                        <  1:1115348/57‑1 (MQ=255)

                                                                                                                         gcAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGt                                                                                 >  2:449237/1‑64 (MQ=255)

                                                                                                                         gcAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGt                                                                                 <  1:449237/64‑1 (MQ=255)

                                                                                                                         gcAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTAtt      >  2:557168/1‑139 (MQ=255)

                                                                                                                         gcAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTAt       <  2:1256032/138‑1 (MQ=255)

                                                                                                                         gcAAATCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTAt       >  1:1256032/1‑138 (MQ=255)

                                                                                                                            aaTCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTTGc   <  2:1129755/139‑1 (MQ=255)

                                                                                                                             aTCGTAATGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTTGCt  <  1:1160006/139‑1 (MQ=255)

GTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTGGGTACAGCAGCTGCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGC‑AAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTTGCT  >  NC_000913/2800344‑2800607

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A