Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate | Predicted Mutations | Mean Coverage | Total Reads | Percent Mapped | Mapped Reads | Average Read Length |
|---|---|---|---|---|---|---|
| A1 F1 I1 R1 | 773 | 79.9 | 4112934 | 92.2% | 3792125 | 104.5 |
Breseq alignment
| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,585,322 | C→T | T480T (ACG→ACA) | hsdR ← | endonuclease R Type I restriction enzyme |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,585,322 | 0 | C | T | 97.8% | 288.6 / ‑2.2 | 92 | T480T (ACG→ACA) | hsdR | endonuclease R Type I restriction enzyme |
| Reads supporting (aligned to +/- strand): ref base C (1/1); new base T (44/46); total (45/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.40e-01 | |||||||||||
TGTTGAAGGTGTCGCCGTTAATACGCGTATCTTCAAACGCGCCCAGCGCCTGTTCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATC > NC_000913/4585186‑4585456 | tGTTGAAGGTGTCGCCGTTAATACGCGTATCTTCAAACGCGCCCAGCGCCTGTTCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGt > 1:908635/1‑139 (MQ=255) gTTGAAGGTGTCGCCGTTAATACGCGTATCTTCAAACGCGCCCAGCGCCTGTTCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGAGCAGGCGGAACATCATGGCGATTGCTGTa < 1:1172797/139‑1 (MQ=255) aGGTGTCGCCGTTAATACGCGTATCTTCAAACGCGCCCAGCGCCTGTTCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGt < 1:1768755/139‑1 (MQ=255) tgtCGCCGTTAATACGCGTATCTTCAAACGCGCCCAGCGCCTGTTCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGtttt > 2:1939245/1‑139 (MQ=255) cGCCGTTAATACGCGTATCTTCAAACGCGCCCAGCGCCTGTTCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTtacc > 2:482351/1‑139 (MQ=255) gcgTATCTTCAAACGCGCCCAGCGCCTGTTCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGtcgc > 1:1268358/1‑139 (MQ=255) tATCTTCAAACGCGCCCAGCGCCTGTTCGCCAAGAGACCGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGtcgccat > 1:14941/1‑139 (MQ=255) tATCTTCAAACGCGCCCAGCGCCTGTTCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGtcgccat > 2:1714273/1‑139 (MQ=255) tATCTTCAAACGCGCCCAGCGCCTGTTCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGtcgccat > 1:812011/1‑139 (MQ=255) tATCTTCAAACGCGCCCAGCGCCTGTTCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGtcgccat > 2:680539/1‑139 (MQ=255) aTCTTCAAACGCGCCCAGCGCCTGTTCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGtcgccatc < 1:482351/139‑1 (MQ=255) ttCAAACGCGCCCAGCGCCTGTTCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGtcgccatcgcc < 2:1799728/139‑1 (MQ=255) cAAACGCGCCCAGCGCCTGTTCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGtcgccatc > 2:1675852/1‑134 (MQ=255) cAAACGCGCCCAGCGCCTGTTCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGtcgccatc > 2:370611/1‑134 (MQ=255) cAAACGCGCCCAGCGCCTGTTCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGtcgccatc < 1:1675852/134‑1 (MQ=255) cAAACGCGCCCAGCGCCTGTTCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGtcgccatc < 1:370611/134‑1 (MQ=255) aaaCGCGCCCAGCGCCTGTTCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCcagc < 1:680539/139‑1 (MQ=255) cgcCCAGCGCCTGTTCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGtcgcc > 2:1947707/1‑125 (MQ=255) cgcCCAGCGCCTGTTCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGtcgcc < 1:1947707/125‑1 (MQ=255) cgcCCAGCGCCTGTTCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGAt < 2:908635/139‑1 (MQ=255) gcCCAGCGCCTGTTCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGAtc > 2:1160687/1‑139 (MQ=255) cgcCTGTTCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGATTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCttgt < 1:1718431/139‑1 (MQ=255) cTGTTCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGc < 1:1276936/139‑1 (MQ=255) ttCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGt > 2:618439/1‑93 (MQ=255) ttCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGt < 1:618439/93‑1 (MQ=255) ttCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGcccc > 1:2035539/1‑139 (MQ=255) agaACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGAtt < 1:1686149/139‑1 (MQ=255) gTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGAtc > 1:1829425/1‑109 (MQ=255) gTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGAtc < 2:1829425/109‑1 (MQ=255) tCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGCACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCaa > 1:1198727/1‑139 (MQ=255) aCAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACcg < 2:14941/139‑1 (MQ=255) aaGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACcgcg < 2:2035539/139‑1 (MQ=255) ggAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACcgcgcg > 1:517371/1‑139 (MQ=255) ggAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACcgcgcg > 2:754412/1‑139 (MQ=255) gaATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCt < 2:364177/108‑1 (MQ=255) gaATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCt > 1:364177/1‑108 (MQ=255) aaTGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACgg > 2:743219/1‑137 (MQ=255) aaTGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACgg < 1:743219/137‑1 (MQ=255) aaTGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCa < 2:1268358/139‑1 (MQ=255) aaTGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCa > 1:1763297/1‑139 (MQ=255) tGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCcagc > 2:700460/1‑86 (MQ=255) tGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCcagc < 1:700460/86‑1 (MQ=255) tGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATc < 2:812011/139‑1 (MQ=255) tGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATc < 2:517371/139‑1 (MQ=255) gCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGa < 2:1432090/131‑1 (MQ=255) gCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGa > 1:1432090/1‑131 (MQ=255) gCGTTTAAAACGCTGGGACTGGATCAGACGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCt > 2:2039975/1‑139 (MQ=255) cGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATc < 2:2033139/137‑1 (MQ=255) cGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATc > 1:2033139/1‑137 (MQ=255) cGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCtt > 1:156012/1‑139 (MQ=255) gTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGt < 2:351852/55‑1 (MQ=255) gTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGt > 1:351852/1‑55 (MQ=255) gTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCttgtt > 1:845440/1‑96 (MQ=255) gTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCttgtt < 2:845440/96‑1 (MQ=255) gTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTc < 1:1714273/139‑1 (MQ=255) tttAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTcc < 1:1160687/139‑1 (MQ=255) ttAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCt < 2:1198727/139‑1 (MQ=255) aaaCGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCtt < 2:2055549/133‑1 (MQ=255) aaaCGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCtt > 1:2055549/1‑133 (MQ=255) tGGGACTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAAc > 2:841817/1‑139 (MQ=255) cTGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAgg < 1:1939245/139‑1 (MQ=255) tGGATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGc < 2:1763297/139‑1 (MQ=255) gATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGtcgccatcg > 1:1455567/1‑59 (MQ=255) gATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGtcgccatcg < 2:1455567/59‑1 (MQ=255) gATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGc < 2:878849/79‑1 (MQ=255) gATCAGGCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGc > 1:878849/1‑79 (MQ=255) ggCGGAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAgctc > 2:1795667/1‑139 (MQ=255) ggAACATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAgctcgct < 1:2039975/139‑1 (MQ=255) aaCATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGtcgccatcgcca < 1:623270/52‑1 (MQ=255) aaCATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGtcgccatcgcca > 2:623270/1‑52 (MQ=255) aaCATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGAtt > 2:811776/1‑81 (MQ=255) aaCATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGAtt < 1:811776/81‑1 (MQ=255) aaCATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGa < 1:640776/100‑1 (MQ=255) aaCATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGa > 2:640776/1‑100 (MQ=255) aaCATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACg < 1:1070951/122‑1 (MQ=255) aaCATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACg > 2:1070951/1‑122 (MQ=255) aCATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCt > 2:168577/1‑111 (MQ=255) aCATCATGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCt < 1:168577/111‑1 (MQ=255) catGGCGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCa < 1:1596575/139‑1 (MQ=255) catGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAgctcgct > 1:1528046/1‑132 (MQ=255) catGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAgctcgct < 2:1528046/132‑1 (MQ=255) cGATTGCTGTACGGGTTTTACCGGTACCGGtcgccatcgcca < 1:1218952/42‑1 (MQ=255) cGATTGCTGTACGGGTTTTACCGGTACCGGtcgccatcgcca > 2:1218952/1‑42 (MQ=255) cGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGAtt < 2:1222736/71‑1 (MQ=255) cGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCt < 2:702885/102‑1 (MQ=255) cGATTGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCt > 1:702885/1‑102 (MQ=255) cGATTGCTGTACGGGCTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGAtt > 1:1222736/1‑71 (MQ=255) ttGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCttgtt < 2:561425/54‑1 (MQ=255) ttGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCttgtt > 1:561425/1‑54 (MQ=255) ttGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGTCTTTTCAACCGCGCGGACg > 1:526659/1‑89 (MQ=255) ttGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGTCTTTTCAACCGCGCGGACg < 2:526659/89‑1 (MQ=255) ttGCTGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATc > 2:1046157/1‑139 (MQ=255) | TGTTGAAGGTGTCGCCGTTAATACGCGTATCTTCAAACGCGCCCAGCGCCTGTTCGCCAAGAGAACGGCGGTCGACAAGGAAGAGAATGCGTTTAAAACGCTGGGACTGGATCAGGCGGAACATCATGGCGATTGCCGTACGGGTTTTACCGGTACCGGTCGCCATCGCCAGCAGGATCTCTTGTTGCCCCTTGACGATTGCCTTTTCAACCGCGCGGACGGCATCTTCCTGATAATAACGCAGGCCCAGCTCGCTCATGCCAGGGTTATC > NC_000913/4585186‑4585456 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |