Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A36 F92 I2 R1
|
25 |
426.8 |
18205940 |
96.3% |
17532320 |
149.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_002947 |
2,209,475 |
A→T |
N387I (AAC→ATC) |
PP_1948 → |
benzaldehyde dehydrogenase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_002947 | 2,209,475 | 0 | A | T | 99.1%
| 1191.7
/ ‑1.2
| 315 | N387I (AAC→ATC) | PP_1948 | benzaldehyde dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base A (3/0); new base T (166/146); total (169/146) |
| Fisher's exact test for biased strand distribution p-value = 2.52e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.86e-01 |
Only 100 of 320 total aligned reads displayed.
CCCCCTAACGACCAAGGCTCAGTTTGAGCAGGTTCATCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCAACAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTCGCGGCTGGCGTATGGACCACCGATCTGGCTCGC > NC_002947/2209329‑2209620
|
cccccTAACGACCAAGGCTCAGTTTGAGCAGGTTCATCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGtcatca > 2:7799112/1‑149 (MQ=255)
ccccTAACGACCAAGGCTCAGTTTGAGCAGGTTCATCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTcatcaa > 1:6915252/1‑149 (MQ=255)
ccccTAACGACCAAGGCTCAGTTTGAGCAGGTTCATCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTcatcaa > 1:5177404/1‑149 (MQ=255)
cTAACGACCAAGGCTCAGTTTGAGCAGGTTCATCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTc > 2:4942950/1‑149 (MQ=255)
aaCGACCAAGGCTCAGTTTGAGCAGGTTCATCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGa < 1:4698932/149‑1 (MQ=255)
cGACCAAGGCTCAGTTTGAGCAGGTTCATCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATg < 1:8652973/149‑1 (MQ=255)
cGACCAAGGCTCAGTTTGAGCAGGTTCATCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATg < 2:5210168/149‑1 (MQ=255)
cGACCAAGGCTCAGTTTGAGCAGGTTCATCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATg > 2:7386558/1‑149 (MQ=255)
aCCAAGGCTCAGTTTGAGCAGGTTCATCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCg > 2:5501729/1‑149 (MQ=255)
aaGGCTCAGTTTGAGCAGGTTCATCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGAt < 2:1063724/149‑1 (MQ=255)
cTCAGTTTGAGCAGGTTCATCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCt > 1:3437106/1‑149 (MQ=255)
cAGTTTGAGCAGGTTCATCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCg > 1:7523397/1‑149 (MQ=255)
cAGTTTGAGCAGGTTCATCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCg < 2:6281726/149‑1 (MQ=255)
aGTTTGAGCAGGTTCATCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCgg < 2:4900438/149‑1 (MQ=255)
ttGAGCAGGTTCATCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGgaa > 1:244771/1‑149 (MQ=255)
ttGAGCAGGTTCATCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGgaa > 1:299643/1‑149 (MQ=255)
gAGCAGGTTCATCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGgaaga > 2:381672/1‑149 (MQ=255)
aGCAGGTTCATCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGgaagaa < 2:3630086/149‑1 (MQ=255)
gCAGGTTCATCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGaaa > 2:1603976/1‑149 (MQ=255)
aGGTTCATCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAAtt > 1:3840791/1‑149 (MQ=255)
ttCATCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTc > 2:7700618/1‑149 (MQ=255)
ttCATCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTc > 2:7335530/1‑149 (MQ=255)
tCATCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCg > 2:1942670/1‑149 (MQ=255)
cATCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCgg < 2:703783/149‑1 (MQ=255)
aTCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGa < 2:1640291/149‑1 (MQ=255)
cGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGAcc < 1:6268609/149‑1 (MQ=255)
ttACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCg < 1:7130791/149‑1 (MQ=255)
tACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCgg > 2:7519339/1‑148 (MQ=255)
aCAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGtt < 1:3158968/149‑1 (MQ=255)
cAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTc > 2:7246229/1‑149 (MQ=255)
aaCGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCt < 2:1409405/149‑1 (MQ=255)
aCGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTg < 1:5030351/149‑1 (MQ=255)
aCGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTg < 1:1736273/149‑1 (MQ=255)
gAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGt < 1:7943395/149‑1 (MQ=255)
aGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTa < 2:4784411/149‑1 (MQ=255)
gCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTAc < 2:3879603/149‑1 (MQ=255)
cTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACt > 1:8155793/1‑149 (MQ=255)
cTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACt > 2:8632200/1‑149 (MQ=255)
tGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGACGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTg > 1:8288010/1‑149 (MQ=255)
tGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTg > 1:4420006/1‑149 (MQ=255)
gCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGAt < 2:7474566/149‑1 (MQ=255)
ccATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGAtt < 2:1005206/149‑1 (MQ=255)
aTCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTcc > 2:555854/1‑149 (MQ=255)
ccAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGt > 1:1023809/1‑149 (MQ=255)
cAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCTAGTTACTATACCGTCTTGTACGTACGAACCTCCTTCTACACCTACGTCATCAACTCGATGAGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGtt < 2:4468087/149‑1 (MQ=255)
aggaggGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTc > 2:2665013/1‑149 (MQ=255)
aggaggGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTc < 2:906961/149‑1 (MQ=255)
ggaggGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCa < 1:3707739/149‑1 (MQ=255)
ggaggGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCa > 1:3772524/1‑149 (MQ=255)
gggggCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAgg > 1:3918170/1‑149 (MQ=255)
gggggCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAgg < 2:582986/149‑1 (MQ=255)
ggggCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGa > 1:1282171/1‑149 (MQ=255)
cTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGaa > 1:7743891/1‑149 (MQ=255)
aTTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAAc < 1:7422946/149‑1 (MQ=255)
ttGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGc > 1:4605733/1‑149 (MQ=255)
tGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCg > 2:1072339/1‑149 (MQ=255)
gTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGt > 1:3524192/1‑149 (MQ=255)
tCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGTTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTg < 2:6774784/149‑1 (MQ=255)
tCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTg < 2:806070/149‑1 (MQ=255)
gAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATcgc > 1:1122893/1‑149 (MQ=255)
aaGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATcgcg > 2:1109518/1‑149 (MQ=255)
aGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGa < 1:7665409/149‑1 (MQ=255)
aGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGa < 1:4075433/149‑1 (MQ=255)
gCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGaa < 2:298355/149‑1 (MQ=255)
aaGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACt > 2:616787/1‑149 (MQ=255)
aGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTc < 2:6005962/149‑1 (MQ=255)
tGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCgg < 2:2744413/149‑1 (MQ=255)
gACAAAACCGGCTGGAACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGa > 1:6484418/1‑149 (MQ=255)
aCAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGGTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGAc > 2:3261967/1‑149 (MQ=255)
cAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACt > 2:8833861/1‑149 (MQ=255)
cAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACt > 2:8496876/1‑149 (MQ=255)
aaaCCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTAc < 2:6607055/149‑1 (MQ=255)
aaCCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACg < 2:3432366/149‑1 (MQ=255)
ggCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCt > 1:6692121/1‑149 (MQ=255)
cTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTcg > 1:8955995/1‑149 (MQ=255)
cTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTcg > 1:5876256/1‑149 (MQ=255)
ggTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTcgcg < 1:6166906/149‑1 (MQ=255)
tacgtacgACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTCGCGGc > 2:4542144/1‑149 (MQ=255)
acgtacgACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTCGCGGCt < 1:8746138/149‑1 (MQ=255)
acgtacgACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTCGCGGCt < 1:4461507/149‑1 (MQ=255)
gtacgACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTCGCGGCTgg < 2:8269177/149‑1 (MQ=255)
gtacgACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTCGCGGCTgg < 1:2707966/149‑1 (MQ=255)
acgACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTCGCGGCTGGCg < 2:2187942/149‑1 (MQ=255)
acgACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTCGCGGCTGGCg > 1:2233272/1‑149 (MQ=255)
aCCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTCGCGGCTGGCGTAt < 2:8340575/149‑1 (MQ=255)
cccACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTCGCGGCTGGCGTATg > 2:4228461/1‑149 (MQ=255)
cACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTCGCGGCTGGCGTATGGa < 2:6729211/149‑1 (MQ=255)
aCCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTCGCGGCTGGCGTATGGac > 2:2590603/1‑149 (MQ=255)
ccGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTCGCGGCTGGCGTATGGacc < 1:4319923/149‑1 (MQ=255)
gTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTCGCGGCTGGCGTATGGaccac < 1:4795529/149‑1 (MQ=255)
tACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTCGCGGCTGGCGTATGGACCACCGa < 2:442145/149‑1 (MQ=255)
tACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTCGCGGCTGGCGTATGGACCACCGa < 1:5398403/149‑1 (MQ=255)
acacCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTCGCGGCTGGCGTATGGACCACCGAt < 1:5616718/149‑1 (MQ=255)
acCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTCGCGGCTGGCGTATGGACCACCGATCt < 2:2362372/149‑1 (MQ=255)
acCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTCGCGGCTGGCGTATGGACCACCGATCt > 1:8050282/1‑149 (MQ=255)
acCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTCGCGGCTGGCGTATGGACCACCGATCt < 2:7629107/149‑1 (MQ=255)
acCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTCGCGGCTGGCGTATGGACCACCGATCt < 1:658100/149‑1 (MQ=255)
acCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTCGCGGCTGGCGTATGGACCACCGATCt < 2:8746034/149‑1 (MQ=255)
cAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTCGCGGCTGGCGTATGGACCACCGATCTgg < 2:5996680/149‑1 (MQ=255)
aaCGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTCGCGGCTGGCGTATGGACCACCGATCTGGc > 1:6030832/1‑149 (MQ=255)
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CCCCCTAACGACCAAGGCTCAGTTTGAGCAGGTTCATCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCAACAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTCGCGGCTGGCGTATGGACCACCGATCTGGCTCGC > NC_002947/2209329‑2209620
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
