Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A36 F92 I1 R1
|
25 |
267.8 |
11967606 |
95.0% |
11369225 |
146.1 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_002947 |
2,209,475 |
A→T |
N387I (AAC→ATC) |
PP_1948 → |
benzaldehyde dehydrogenase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_002947 | 2,209,475 | 0 | A | T | 99.6%
| 906.1
/ ‑5.0
| 252 | N387I (AAC→ATC) | PP_1948 | benzaldehyde dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base T (124/127); total (125/127) |
| Fisher's exact test for biased strand distribution p-value = 4.96e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 |
Only 100 of 255 total aligned reads displayed.
GCCCCCTAACGACCAAGGCTCAGTTTGAGCAGGTTCATCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCAACAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTCGCGGCTGGCGTATGGACCACCGATCTGGCTC > NC_002947/2209328‑2209618
|
cccccTAACGACCAAGGCTCAGTTTGAGCAGGTTCATCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTcatcaa < 1:494955/150‑1 (MQ=255)
ccTAACGACCAAGGCTCAGTTTGAGCAGGTTCATCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTc > 1:1387325/1‑150 (MQ=255)
ccTAACGACCAAGGCTCAGTTTGAGCAGGTTCATCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTc > 1:2218003/1‑150 (MQ=255)
ccTAACGACCAAGGCTCAGTTTGAGCAGGTTCATCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTc > 1:2217896/1‑150 (MQ=255)
tAACGACCAAGGCTCAGTTTGAGCAGGTTCATCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGa > 2:2853447/1‑150 (MQ=255)
aaCGACCAAGGCTCAGTTTGAGCAGGTTCATCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGAt > 1:3329413/1‑150 (MQ=255)
aaCGACCAAGGCTCAGTTTGAGCAGGTTCATCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGAt > 1:4414330/1‑150 (MQ=255)
aCGACCAAGTCTCAGTTTGAGCAGGTTCATCGTTACAACGAGCTGGCCATCCAGGAGGGGGATCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTTGTTCGTACGACCCACCGTCTACACCAACGTCATCAACTCGATg < 1:2902456/150‑1 (MQ=255)
cGACCAAGGCTCAGTTTGAGCAGGTTCATCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGc < 1:592526/150‑1 (MQ=255)
cAAGGCTCAGTTTGAGCAGGTTCATCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCGTTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGAt > 2:2422534/1‑150 (MQ=255)
gCTCAGTTTGAGCAGGTTCATCGTTACAACGAGCTGGTCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCt > 1:1917515/1‑150 (MQ=255)
gCTCAGTTTGAGCAGGTTCATCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCt > 1:1685929/1‑150 (MQ=255)
tCAGTTTGAGCAGGTTCATCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGATCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCg < 1:4055903/150‑1 (MQ=255)
tCAGTTTGAGCAGGTTCATCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCg > 2:3758981/1‑150 (MQ=255)
cAGTTTGAGCAGGTTCATCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCgg < 1:3638147/150‑1 (MQ=255)
gTTTGAGCAGGTTCATCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGga > 1:2327708/1‑150 (MQ=255)
gAGCAGGTTCATCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGgaagaa > 1:1185269/1‑150 (MQ=255)
gCAGGTTCATCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAAt > 2:3710721/1‑150 (MQ=255)
gTTCATCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTc < 1:88178/150‑1 (MQ=255)
tCATCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGGCAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCgg > 1:5656209/1‑150 (MQ=255)
cATCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGa < 1:1911035/150‑1 (MQ=255)
aTCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGAc > 2:5815638/1‑150 (MQ=255)
ttACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGt > 1:5697088/1‑150 (MQ=255)
ttACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGt > 2:1393393/1‑150 (MQ=255)
aaCGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTg > 2:4892253/1‑150 (MQ=255)
aaCGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTg < 2:3667771/150‑1 (MQ=255)
aCGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTgg > 1:4808223/1‑150 (MQ=255)
aCGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTgg < 1:5169804/150‑1 (MQ=255)
gAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTa < 2:2594335/150‑1 (MQ=255)
gCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACt < 2:1615281/150‑1 (MQ=255)
ggCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCTTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGAt < 2:3841321/150‑1 (MQ=255)
gCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGAtt < 1:1865251/150‑1 (MQ=255)
gCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGAtt < 1:4878683/150‑1 (MQ=255)
cATCCAGGAGGGGGCTCAGTGCGTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTcc < 2:3602860/150‑1 (MQ=255)
aTCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCg > 1:1656991/1‑150 (MQ=255)
ggaggGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCaa < 2:3874575/150‑1 (MQ=255)
ggaggGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCaa < 2:5678495/150‑1 (MQ=255)
ggaggGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCaa < 2:5722336/150‑1 (MQ=255)
ggaggGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCaa < 1:1818457/150‑1 (MQ=255)
aggGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAgg < 2:1754933/150‑1 (MQ=255)
gggggCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGa < 2:1883916/150‑1 (MQ=255)
ggggCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGAc < 2:435326/150‑1 (MQ=255)
ggCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAg < 1:4706707/145‑1 (MQ=255)
tCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGaaaa > 2:3031174/1‑150 (MQ=255)
tCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGaaaa > 1:4762739/1‑150 (MQ=255)
tCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGaaaa > 1:1748491/1‑150 (MQ=255)
ttGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAg < 1:1104352/139‑1 (MQ=255)
ttGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGa < 1:3295001/150‑1 (MQ=255)
tGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAg < 1:62574/150‑1 (MQ=255)
tGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAg < 1:62806/150‑1 (MQ=255)
tGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAg < 2:2422161/150‑1 (MQ=255)
gCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAgg < 1:1574565/150‑1 (MQ=255)
ggTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGcc > 1:3657359/1‑150 (MQ=255)
gggAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATcg > 1:2796955/1‑150 (MQ=255)
ggAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATcgc < 2:2752991/150‑1 (MQ=255)
gAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATcgcg > 1:1006933/1‑150 (MQ=255)
gAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATcgcg > 2:4774474/1‑150 (MQ=255)
aGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGaa < 2:3400896/150‑1 (MQ=255)
aGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGaa < 2:1023222/150‑1 (MQ=255)
aGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGaa < 1:2051232/150‑1 (MQ=255)
gCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAAt > 2:4146604/1‑150 (MQ=255)
cTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGa > 2:2032942/1‑147 (MQ=255)
cTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGa < 1:2032942/147‑1 (MQ=255)
aaGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTc < 1:1331123/150‑1 (MQ=255)
aGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCg < 2:484715/150‑1 (MQ=255)
aGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCg < 2:4488003/150‑1 (MQ=255)
tGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGa > 2:1163468/1‑150 (MQ=255)
aaaaCCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTAc > 1:2349442/1‑150 (MQ=255)
aaaaCCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTAc < 2:4689650/150‑1 (MQ=255)
aaaaCCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTAc > 2:5259366/1‑150 (MQ=255)
aaaaCCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGAAGCGGATTGCTCGGGAAGAAATTTTCGGACCCGGTCTGGTCCTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTAc > 2:5637886/1‑150 (MQ=255)
aaCCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTg < 2:358592/124‑1 (MQ=255)
aaCCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTg > 1:358592/1‑124 (MQ=255)
aaCCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGAATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACgg < 2:2972676/150‑1 (MQ=255)
ggCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTc > 1:4798799/1‑150 (MQ=255)
ggCTGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTc < 2:1129762/150‑1 (MQ=255)
tGGTACGTACGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTcgcg > 2:352685/1‑150 (MQ=255)
gtacgtacGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTc > 1:5468286/1‑67 (MQ=255)
gtacgtacGACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTCGCGGc > 1:3423747/1‑150 (MQ=255)
tacgtacgACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTCGCGGCt < 1:3028657/150‑1 (MQ=255)
acgtacgACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTCGCGGCTg < 1:5259366/150‑1 (MQ=255)
acgtacgACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTCGCGGCTg < 1:4244240/150‑1 (MQ=255)
gtacgACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTCGCGGCTGGc < 2:4399700/150‑1 (MQ=255)
tacgACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTCGCGGCTGGCg > 2:2178613/1‑150 (MQ=255)
tacgACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTCGCGGCTGGCg > 2:6948/1‑150 (MQ=255)
acgACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTCGCGGCTGGCGt < 1:502843/150‑1 (MQ=255)
gACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTgg < 2:1838320/108‑1 (MQ=255)
gACCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTCGCGGCTGGCGTAt < 2:2217896/150‑1 (MQ=255)
aCCCACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTCGCGGCTGGCGTATg < 1:929706/150‑1 (MQ=255)
ccACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTCGCGGCt > 1:3714058/1‑140 (MQ=255)
ccACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTCGCGGCTGGCGTATGGa > 2:5327528/1‑150 (MQ=255)
ccACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTCGCGGCTGGCGTATGGa > 2:2289556/1‑150 (MQ=255)
cACCGTCTACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTCGCGGCTGGCGTATGGac > 2:2383259/1‑150 (MQ=255)
tACACCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTCGCGGCTGGCGTATGGACCACCGAt > 1:3796191/1‑150 (MQ=255)
cacCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTCGCGGCTGGCGTATGGACCACCGATCt < 2:2545494/150‑1 (MQ=255)
cacCAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTCGCGGCTGGCGTATGGACCACCGATCt > 2:5446661/1‑150 (MQ=255)
ccaCGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTCGCGGCTGGCGTATGGACCACCGATCTGGc < 2:3230716/148‑1 (MQ=255)
cAACGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTCGCGGCTGGCGTATGGACCACCGATCTGGc < 2:5153281/150‑1 (MQ=255)
aaCGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTCGCGGCTGGCGTATGGACCACCGATCTGGcg > 2:3985817/1‑149 (MQ=255)
aaCGTCATCAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTCGCGGCTGGCGTATGGACCACCGATCTGGCt > 2:1447515/1‑150 (MQ=255)
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GCCCCCTAACGACCAAGGCTCAGTTTGAGCAGGTTCATCGTTACAACGAGCTGGCCATCCAGGAGGGGGCTCATTGCTTGGTCGGTGGGGAAGCTCCAAGTGACAAAACCGGCTGGTACGTACGACCCACCGTCTACACCAACGTCAACAACTCGATGCGGATTGCTCGGGAAGAAATTTTCGGACCCGTTCTGGTACTGATTCCGTTCAAGGACGAAAACGAGGCGGTGGCCATCGCGAATGACTCGGACTACGGGCTCGCGGCTGGCGTATGGACCACCGATCTGGCTC > NC_002947/2209328‑2209618
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
