Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A16 F19 I0 R1
|
32 |
84.8 |
2851444 |
95.0% |
2708871 |
147.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913_3_pae_tpiA |
3,440,435 |
C→A |
36.5% |
D199Y (GAC→TAC) |
rpoA ← |
RNA polymerase, alpha subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913_3_pae_tpiA | 3,440,435 | 0 | C | A | 36.5%
| 134.2
/ 112.2
| 131 | D199Y (GAC→TAC) | rpoA | RNA polymerase, alpha subunit |
| Reads supporting (aligned to +/- strand): ref base C (36/47); new base A (21/27); total (57/74) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01 |
Only 100 of 135 total aligned reads displayed.
TCTGGTTTCTCTTCTTTCACTTCAGGCTGACGTACATCACGTAAGTCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTCCAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATACGCTCCACAGGGCTGTAGCATGCGTCGACCAGCAGACGGCCGATTGGGCGCTCATCTTCTTCCGAATGAATTCGGGTAGAAGCCGGCACATAA > NC_000913_3_pae_tpiA/3440287‑3440577
|
tctGGTTTCTCTTCTTTCCCTTCAGGCTGACGTACATCACGTAAGTCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTc < 1:230535/149‑1 (MQ=255)
tctGGTTTCTCTTCTTTCACTTCAGGCTGACGTACATCACGTAAGTCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTc > 1:349580/1‑149 (MQ=255)
tctGGTTTCTCTTCTTTCACTTCAGGCTGACGTACATCACGTAAGTCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTc > 1:283799/1‑149 (MQ=255)
tctGGTTTCTCTTCTTTCACTTCAGGCTGACGTACATCACGTAAGTCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGCTGGTTTCCATTTCGATGACCAGCTTGTc < 2:810928/149‑1 (MQ=255)
tGGTTTCTCTTCTTTCACTTCAGGCTGACGTACATCACGTAAGTCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTCCa < 1:410364/149‑1 (MQ=255)
ttCTCTTCTTTCACTTCAGGCTGACGTACATCACGTAAGTCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTCCAGGTc < 1:45437/149‑1 (MQ=255)
ttCTCTTCTTTCACTTCAGGCTGACGTACATCACGTAAGTCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTCCAGGTc < 2:658265/149‑1 (MQ=255)
ttCTCTTCTTTCACTTCAGGCTGACGTACATCACGTAAGTCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCCATGACCAGCTTGTCCAGGTc > 2:431339/1‑149 (MQ=255)
cccttcttTCACTTCAGGCTGACGTACATCACGTAAGTCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTACAGGTCgg < 1:476700/147‑1 (MQ=255)
ttcttTCACTTCAGGCTGACGTACATCACGTAAGTCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCCTTTCGATGACCAGCTTGTACAGGTCGGTAc > 2:187566/1‑149 (MQ=255)
ttcttTCACTTCAGGCTGACGTACATCACGTAAGTCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCCGCTTGTCCAGGTAGGTAc > 2:753837/1‑149 (MQ=255)
tCACTTCAGGCTGACGTACATCACGTAAGTCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTCCAGGTCGGTACGCTgc > 1:1323334/1‑148 (MQ=255)
ttCAGGCTGACGTACATCACGTAAGTCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCCTCTTCAGGATGGGTTGTGCCGTTGGTTTCCATTTCGATGACCACCTTGTCCAGTTAGGTACGCTGTTCTa > 2:261785/1‑149 (MQ=255)
ttCAGGCTGACGTACATCACGTAAGTCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTACAGGTCGGTACGCTGTTCTa < 1:173117/149‑1 (MQ=255)
ttCAGGCTGACGTACATCACGTAAGTCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCACCTTGTCCAGGCCGGTCCGCTGTTCtc > 2:261730/1‑148 (MQ=255)
tgcAGTCTGACGGACATCACGTAAGTCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTCCAGGTCGGTACGCTGTTCTa < 2:955079/147‑1 (MQ=255)
tCAGGCTGACGTACATCACGTAAGTCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTACAGGTCGGTACGCTGTTCTac < 1:1151954/149‑1 (MQ=255)
gCTGACGTACATCACGTAAGTCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGCATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTCCAGGTCGGTACGCTGTTCTACAcgc > 1:910773/1‑149 (MQ=255)
cTGACGTAAATCACGTAACTCAACGAAAGCTTCCAGTTATTCAGCCAGAATGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGTCCAGCTTGTCCATGTCGGTACGCTGTTCTACAcgcg < 2:570846/149‑1 (MQ=255)
gACGTACATCCCGTAAGTCAACGCAACTTTCCTGTGGTGCGGCCGGGCCCTGGGCCGGACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTCCAGGTCGGTACGCTGTTCTACACGCgct < 1:1390859/149‑1 (MQ=255)
cATCACGTAAGTCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTCCAGGTCGGTACGCTGTTCTACACGCGCTGCTTCa > 1:115109/1‑149 (MQ=255)
aTCACGTAAGTCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTCCAGGTCGGTACGCTGTTCTACACGCGCTGCTTCaa > 2:970131/1‑149 (MQ=255)
tCACGTAAGTCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCATCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTACAAGTCGGGACGCAGTTCTACACGCGCTGCTTCAAc > 2:1208595/1‑149 (MQ=255)
cACGTAAGTCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTACAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACa > 2:435271/1‑149 (MQ=255)
cACGTAAGTCAACGAAAGCTTCCAGTTGATCAGCCAGAATGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTCTCCATTGCGACGACCAGCTTGTCCAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACa < 1:1040866/149‑1 (MQ=255)
tctAAGTTAACTAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTACAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACAtt < 2:1420753/147‑1 (MQ=255)
cGTAAGTCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTACAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACAtt < 1:1295504/149‑1 (MQ=255)
aaGTCAACGAAAGCTTCCAGTTGTTGAGCCAGAATGGTTGCCGCACGACCAAGCGCCTCTTCAGGATCGATTGTGCCGATGCTTTGCATTTCGATGACCAGCTTGTCCAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTa < 1:1260696/149‑1 (MQ=255)
aaGTCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTCCAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTa < 2:74975/149‑1 (MQ=255)
aaGTCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTACAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTa < 2:747664/149‑1 (MQ=255)
aaGTCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTACAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTa < 1:798045/149‑1 (MQ=255)
aaGTCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATGTCGATGACCAGCTTGTCCAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTa < 1:1187818/149‑1 (MQ=255)
aaGTCAACAAAAGCTTCCCGTTGTTAATTCAGAATTGTTGCTGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTCCAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTa < 2:434849/149‑1 (MQ=255)
attCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTCCAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAg < 2:943339/147‑1 (MQ=255)
aGTCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGAATACTAGCTTGTCCAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAg < 1:1111028/149‑1 (MQ=255)
tCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTCCAGGTCGGTACGCTGTTCTACACGCGCTGATTCAACATTGTAGGc < 2:494291/149‑1 (MQ=255)
tCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTACAGACTGTTACGCGGTTCTACACGCGCTGCTTCAACATTGTAGGc > 1:265527/1‑149 (MQ=255)
tCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGATTTCCATTTCGATGACCAGCTTGTCCAGGTCGGTACGCTGCTCTACACGCGCTGCTTCCACATTGTAGGc > 2:983416/1‑149 (MQ=255)
tCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTACCGTTCGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTACAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGc < 1:1097469/149‑1 (MQ=255)
aatgAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTCCAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCaa < 2:503891/146‑1 (MQ=255)
aaCGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGGCGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTCCAGGTCGGTACGCGGTTTTCCACGCGGTGCTCGAACATTGTAGGCaa > 1:990607/1‑149 (MQ=255)
aaCGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTCCAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCaa < 1:412083/149‑1 (MQ=255)
aaCGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTACAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCaa < 1:435271/149‑1 (MQ=255)
aaCGAAAGCTTCAAGTTGATCAGGCAGAATGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTCCAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCaa > 2:169495/1‑149 (MQ=255)
cGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTACAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATa < 1:1278677/149‑1 (MQ=255)
gaaGCTTCGACTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCCTCTTCAGCATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTACAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATACg < 2:718793/148‑1 (MQ=255)
gCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTCCAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATACGCTc < 1:179003/149‑1 (MQ=255)
ttCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTACAGGTCGGTACGCTGTTCTACACGCGCTTCTTCAACATTGTAGGCAATACGCTCca > 1:306126/1‑149 (MQ=255)
ccAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTCCAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATACGCTCcaca < 2:114773/149‑1 (MQ=255)
cAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTCCAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATACGCTCCACAg < 2:1014000/149‑1 (MQ=255)
gttgttCAGCCAGAATGGTTGCCGGACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTACAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATACGCTCCACAggg < 1:475814/149‑1 (MQ=255)
gttgttCAGCCAGAATGGTGGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTACAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATACGCTCCACAggg < 1:476400/149‑1 (MQ=255)
tgttCAGCCAGAATGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTACAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATACGCTCCACAGGGCt < 1:235187/149‑1 (MQ=255)
cAGCCCGAATGGTTGCCGCACGACGAACCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTCCAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATACGCTCCACAGGGCTGTAg < 2:981828/149‑1 (MQ=255)
aGCCAGAATGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTCCAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATACGCTCCACAGGGCTGTAGc > 1:522686/1‑149 (MQ=255)
gCCAGAATGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTCCAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATACGCTCCACAGGGCTGtttcg < 2:1157095/149‑5 (MQ=255)
gAATGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCAGTTGGTATCCATTTCGATGACCAGCTTGTCCAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATACGCTCCACAGGGCTGTAGCATGCg > 1:1343251/1‑149 (MQ=255)
aaTGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTCCAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTATAGGCAATACGCTCCACAGTGCTGTAGCATGCGt > 2:1331285/1‑149 (MQ=255)
tGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTCCAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATACGCTCCACAGGGCTGTAGCATGCGTCg < 1:1415683/149‑1 (MQ=255)
ggTTGCCGGACGACGTATCGCCTCTTCAGGATGGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTACAGGTCGGTACGCTGTTCTAAGCCCGCTGCGTCAACATTGTAGGCAATACGCTCCACAGGGCTGTAGCATGCGTCGa < 2:729342/149‑1 (MQ=255)
ggTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTACAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATACGCTCCACAGGGCTGTAGCATGCGTCGa < 1:928036/149‑1 (MQ=255)
gCCGTAGGACGAATTGCCTCTTCGGGGTCGATTGTGCCGTTGGTTTCTATTTCGATGACCAGCTTGTCTTGGTCGGTTCGCTGTTCTACCCGTGTTGTTTCAATATTGTAGGCAATACGCTCCACAGGGCTGTTGCATGCGTCGACtag < 2:819291/149‑1 (MQ=255)
gCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGGTTACCAGCTTGTACAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATACGCTCCACAGGGCTGTAGCATGCGTCGACcag > 1:1111120/1‑149 (MQ=255)
gCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTACAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATACGCTCCACAGGGCTGTAGCATGCGTCGACcag > 1:460168/1‑149 (MQ=255)
ccGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTCCAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATACGCTCCACAGGGCTGTCGCATGCGTCGACcagc > 1:1321991/1‑149 (MQ=255)
acgacgAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTACAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATACGCTCCACAGGGCTGTAGCATGCGTCGACCAGCAGAc > 1:1142899/1‑149 (MQ=255)
actCGCCTCTTCAGGTTCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTACAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATACGCTCCACAGGGCTGTAGCATGCGTCGACCAGCAGACGGCCGa < 1:549595/147‑1 (MQ=255)
aTCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTCCAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATACGCTCCACAGGGCTGTAGCATGCGTCGACCAGCGGACGGCCGAt > 1:955936/1‑149 (MQ=255)
tttccTCTTCGGGATCGATTGTGCCGTTGGGTTCCATTTAGATGTCCGGTTTGTATGGGTCTGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATACGCTCCACAGGGCTGTAGCATGCGTCGACCAGCAGACGGCCGAtt < 2:663754/146‑1 (MQ=255)
ccTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTCCAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATACGCTCCACAGGGCTGTAGCATGCGTCGACCAGCAGACGGCCGATTggg > 1:104970/1‑149 (MQ=255)
ccTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTACAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATACGCTCCACAGGGCTGTAGCATGCGACGACCAGCAGACGGCCGATTggg < 1:810792/149‑1 (MQ=255)
ctctTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTACAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATACGCTCCACAGGGCTGTAGCATGCGTCGACCAGCAGACGGCCGATTGGgc > 1:569489/1‑149 (MQ=255)
ctTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTCCAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATACGCTCCACAGGGCTGTAGCATGCGTCGACCAGCAGACGGCCGATTGGgcgc < 2:1256151/149‑1 (MQ=255)
ggATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTACAGGGCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATTCGCTCCACAGGACTGTAGCATGGGTCGACCAGTCGACGGACGATTGGgcacccacg > 2:65160/1‑142 (MQ=255)
gATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTCCAGGTCGGTACGCTGTTCTACACCCGCTGCTTCAACATTGTAGGCAATACGCTCCACAGGGCTGTAGCATGCGGAGACCAGCAAGCGGCCGATTAGGCGCTccgat > 2:1214231/1‑145 (MQ=255)
gATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTACAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATACGCTCCACAGGGCTGTAGCATGCGTCGACCAGCAGACGGCCGATTGGGCGCTCAtct > 1:1280888/1‑149 (MQ=255)
tCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTCCAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATACGCTCCACAGGGCTGTAGCATGCGTCGACCAGCAGACGGCCGATTGGGCGCTCAtcttc < 2:910773/149‑1 (MQ=255)
ttGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTCCAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATACGCTCCACAGGGCTGTAGCATGCGTCGACCAGCAGACGGCCGATTGGGCACTCATCTTCTTcc < 1:956552/149‑1 (MQ=255)
gtgCCGTTGGTTTCCATTTCGATGACCAGCTTGTACAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATACGCTCCACAGGGCTGTAGCATGCGTCGACCAGCAGACGGCCGATTGGGCGCTCATCTTCTTCCga < 2:920597/149‑1 (MQ=255)
tggcGTTGGTTTCCATTTCGATGACCAGCTTGTACAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATACGCTCCACAGGGCTGTAGCATGCGTCGACCAGCAGACGGCCGATTGGGCGCTCATCTTCTTCCtaa < 2:1306913/146‑1 (MQ=255)
cGTTGGTTTCCATTTCGATGACCAGCTTGTACAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATACGCTCCACAGGGCTGTAACATGCGTCGACCAGCAGACGGCCGATTGGGCGCTCATCTTCTTCCgaatga > 2:1063167/1‑149 (MQ=255)
gTTGGTTTCCATTTCGATGACCAGCTTGTCCAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATACGCTCCACAGGGCTGTAGCATGCGTCGACCAGCAGACGGCCGATTGGGCGCTCATCTTCTTCCgaatgaa > 2:1258639/1‑149 (MQ=255)
gTTGGTTTCCATTTCGATGACCAGCTTGTCCAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATACGCTCCACAGGGCTGTAGCATGCGTCGACCAGCAGACGGCCGATTGGGCCCTCATCTTCTTCCgaatgaa > 2:1258869/1‑149 (MQ=255)
tgttttCCATTTCGATGACCAGCTTGTCCAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATACGCTCCACAGGGCTGTAGCATGCGTCGACCAGCAGACGGCCGATTGGGCGCTCATCTTCTTCCGAATGAAtt < 2:471687/146‑1 (MQ=255)
gTTTCCATTTCGATGACCAGCTTGTCCAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATACGCTCCACAGGGCTGTAGCATTCGTCGACCAGCAGACGGCCGATTGGGCGCTCATCTTCTTCCGAATGAATTCg < 1:639629/149‑1 (MQ=255)
gTTTCCATTTCGATGACCAGCTTGTCCAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATACGCTCCACAGGGCTGTAGCATGCGTCGACCAGCAGACGGCCGATTGGGCGCTCATCTTCTTCCGAATGAATTCg < 1:591306/149‑1 (MQ=255)
gTTTCCATTTCGATGACCAGCTTGTCCAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATACGCTCCACAGGGCGGTAGCATGCGTCGACCAGCAGACGGCCGCTTGGGCCCGCATCTTCTTCCGAATGAATTCg > 2:793381/1‑149 (MQ=255)
gTTTCCATTTCGATGACCAGCTTGTACAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATACGCTCCACAGGGCTGTAGCATGCGTCGACCAGCAGACGGCCGATTGGGCGCTCATCTTCTTCCGAATGAATTCg > 1:1219332/1‑149 (MQ=255)
tttCCATTTCGATGACCAGCTTGTCCAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATACGCTCCACAGGGCTGTAGCATGCGTCGACCAGCAGACGGCCGATTGGGCGCTCATCTTCTTCCGAATGAATTCgg > 2:915091/1‑149 (MQ=255)
tttCCATTTCGATGACCAGCTTGTCCAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGCCAATAGGCTCCACAGGGCTGTAGCATGCGTCGACAAGTAGACGGCCGGTTGGGCGCGCATCATCTTCCAAAGCAATTggg > 1:298286/1‑149 (MQ=255)
tttCCATTTCGATGACCAGCTTGTACAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATCCGCTCCACAGGGCTGTAGCGTACGTCGACCAGCGCACGGACGATTGACGGTTCATCTTATTCCGAATGACTGCgg > 2:592388/1‑149 (MQ=255)
tttCGATGACCAGCTTGTCCAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATACGCTCCACAGGGCTGTAGCATGCGTCGACCAGCAGACGGCCGATTGGGCGCTCATCTTCTTCCGAATGAATTCGGGTAGaa > 1:1077131/1‑149 (MQ=255)
gATGACCAGCTTGTCCAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATACGCTCCACAGGGCTGTAGCATGCGTCGACCAGCAGACGGCCGATTGGGCGCTCATCTTCTTCCGAATGAATTCGGGTAGAAGCCg < 2:104970/149‑1 (MQ=255)
tGACCAGCTTGTACAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATACGCTCCACAGGGCTGTAGCATGCGTCGACCAACAGACGGCCGATTAGGCGCTCATCTTCTTCCCAATGAATTCTGGGAGAAGCAGGc > 2:274592/1‑149 (MQ=255)
gACCAGCTTGTCCAGGTCGGTAGGCTGTTTTACACGCGCTGCTTCAACATTGTAGGCAATACGCTCCACAGGGCTGTAGCATGCGTCGCCCAGCAGACGGCCGATTGGGCGCTCATCTTCTTCCGAATGAAGTCGGCTTGAAGCCGGcc > 1:723685/1‑148 (MQ=255)
gACCAGCTTGTCCAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATACGCTCCACAGGGCTGTAGCATGCGTCGACCAGCAGACGGCCGATTGGGCGCTCATCTTCTTCCGAATGAATTCGGGTAGAAGCCGGca < 2:1323334/149‑1 (MQ=255)
aCCAGCTTGTCCAGGTCGGTACGCTGTTCTACACGCGCTGCTTCACCATTGTAGGCAATACGCTCCACAGGGCTGTAGCATGCGTCGACCAGCAGACGGCCGATTGGGCGCTCATCTTCTTCCGAATGAATTCGGGTAGAAGCCGGcac > 1:914628/1‑149 (MQ=255)
aCCAGCTTGTCCAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATACGCTCCACAGGGCTGTAGCATGCGTCGACCAGCAGACGGCCGATTGGGCGCTCATCTTCTTCCGAATGAATTCGGGTAGAAGCCGGcac > 1:914458/1‑149 (MQ=255)
cAGCGTGTCCAGGTCGGTACGCTGTTCTACACGCGGTGCTTCAACATTGTAGTGAATACGCTCCACAGGGCTGTAGCATGCGTCGACCAGCAGACGGCCGATTGGGCGCTCATCTTCTTCCGAATGAATTCGGGTAGAAGCCGGCACAt < 2:841664/149‑1 (MQ=255)
gCTTGTCCAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATACGCTCCACAGGGCTGTAGCATGCGTCGACCAGCAGACGGCCGATTGGGCGCTCATCTTCTTCCGAATGAATTCGGGTAGAAGCCGGCACATaa > 1:170293/1‑149 (MQ=255)
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TCTGGTTTCTCTTCTTTCACTTCAGGCTGACGTACATCACGTAAGTCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCCTCTTCAGGATCGATTGTGCCGTTGGTTTCCATTTCGATGACCAGCTTGTCCAGGTCGGTACGCTGTTCTACACGCGCTGCTTCAACATTGTAGGCAATACGCTCCACAGGGCTGTAGCATGCGTCGACCAGCAGACGGCCGATTGGGCGCTCATCTTCTTCCGAATGAATTCGGGTAGAAGCCGGCACATAA > NC_000913_3_pae_tpiA/3440287‑3440577
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
