Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A11 F28 I1 R1 224 87.5 2960670 99.3% 2939945 138.5

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,286,716 A→G V219A (GTA→GCA)  acs ← acetyl‑CoA synthetase (AMP‑forming)

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,286,7160AG100.0% 222.4 / NA 65V219A (GTA→GCA) acsacetyl‑CoA synthetase (AMP‑forming)
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (37/28);  total (37/28)

TAGAGAATAAACAGCGGATCTTCGGCGTTCATCTCTTCCGCCTGGTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTACCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACACCTTCGTCGGAAGTGATCACCAGTCGTGAGTTGG  >  NC_000913/4286584‑4286839
                                                                                                                                    |                                                                                                                           
tAGAGAATAAACAGCGGATCTTCGGCGTTCATCTCTTCCGCCTGGTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTCCCCGCCAGTACGCTTCAGTGCcaccac                                                                                                                      >  1:1294876/1‑140 (MQ=255)
aagaaAAAAAACAGCGGATCTTCGGCTTTCTTCTCTCCCGCCTGGTGCTGATCGCTCGCTTGCCCAACCAGGTCGCCCCCCCACGGGCCGCCCCCTCCCTGCCATTCATTTTTCCCGCCAGTACGCTTCAGTGCcaccac                                                                                                                      <  2:634558/139‑1 (MQ=255)
 agagAATAAACAGCGGATCTTCGGCGTTCATCTCTTCCGCCTGGTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACcaca                                                                                                                     >  1:1321083/1‑140 (MQ=255)
 agaaAAAAACCAGCGGTTCTTCGGCTTTCTTCTCTCCCGCTTGGGGCTGCCCGCTCGCTTGCCCACCCGGGTCGCCCCCCCACGGGCCGCCCCCTTCCTGCCAGTAATTTTTCCCGCCAGTACGCTTCAGTGCCACcaca                                                                                                                     <  2:858843/140‑1 (MQ=255)
       tAAACAGCGGATCTTCGGCGTTCATCTCTTCCGCCTGGTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGctct                                                                                                               >  1:634558/1‑140 (MQ=255)
        aaaCAGCGGATCTTCGGCGTTCATCTCTTCCGCCTGGTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTa                                                                                                              >  2:351255/1‑140 (MQ=255)
          aCAGCGGATCTTCGGCGTTCATCTCTTCCGCCTGGTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACg                                                                                                            >  2:10518/1‑140 (MQ=255)
            aGCGGATCTTCGGCGTTCATCTCTTCCGCCTGGTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCt                                                                                                          >  2:1121986/1‑140 (MQ=255)
               ggATCTTCGGCGTTCATCTCTTCCGCCTGGTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGt                                                                                                       >  1:611515/1‑140 (MQ=255)
               ggATCTTCGGCGTTCATCTCTTCCGCCTGGTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGt                                                                                                       >  1:480640/1‑140 (MQ=255)
               ggATCTTCGGCGTTCATCTCTTCCGCCTGGTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGt                                                                                                       >  2:107325/1‑140 (MQ=255)
               ggATCTTCGGCGTTCATCTCTTCCGCCTGGTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGt                                                                                                       >  1:227249/1‑140 (MQ=255)
               ggATCTTCGGCGTTCATCTCTTCCGCCTGGTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGt                                                                                                       >  2:163917/1‑140 (MQ=255)
               ggATCTTCGGCGTTCATCTCTTCCGCCTGGTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGt                                                                                                       >  2:359615/1‑140 (MQ=255)
               ggATCTTCGGCGTTCATCTCTTCCGCCTGGTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGt                                                                                                       >  2:553584/1‑140 (MQ=255)
                 aTCTTCGGCGTTCATCTCTTCCGCCTGGTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGa                                                                                                     >  2:674239/1‑140 (MQ=255)
                   cTTCGGCGTTCATCTCTTCCGCCTGGTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACg                                                                                                   >  1:6167/1‑140 (MQ=255)
                    ctCGCCGTTCTTCTCTCCCCCCTGGTGGTGACCGCCCACTTGCCCACCCAGGCCGCCCCCCCACAGCCCGCCCCCTCCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGt                                                                                                  <  2:56972/139‑1 (MQ=255)
                           ttCATCTCTTCCGCCTGGTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGtt                                                                                           >  1:1029401/1‑140 (MQ=255)
                           ttCATCTCTTCCGCCTGGTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGtt                                                                                           >  1:755921/1‑140 (MQ=255)
                                   tcccGCCTGGTGCTGACCGCCCGCTTGCCCACCCGGGCCGCCCCCCCACATGTCGCCCCCCTCCTCCCAGTCATTTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAgcg                                                                                   <  2:1321083/138‑1 (MQ=255)
                                      cGCCTGGTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGt                                                                                >  1:941093/1‑140 (MQ=255)
                                             tGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAAc                                                                         >  1:304078/1‑140 (MQ=255)
                                                  aTCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGtttt                                                                    >  2:1330379/1‑140 (MQ=255)
                                                  aTCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTAAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGtttt                                                                    >  2:1015662/1‑140 (MQ=255)
                                                      ctcgttTGCTCACCCAGGTCGCCCCCCCACAGGCCGCCCCCTTCCTCCCAGTCATTTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTttctt                                                                <  1:1403751/140‑1 (MQ=255)
                                                      ctcgctTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTttctt                                                                >  1:1031822/1‑140 (MQ=255)
                                                      ctcgctTGCTCAACCAGGTCGTCCCCCCACAGGTCGCCCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTttctt                                                                <  1:1157794/140‑1 (MQ=255)
                                                       tcgctTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTttcttc                                                               >  1:1329398/1‑140 (MQ=255)
                                                            tGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCgg                                                          >  1:359392/1‑140 (MQ=255)
                                                                       gTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGcc                                               >  1:297446/1‑140 (MQ=255)
                                                                       gTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAACTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGCGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGcc                                               >  2:1188025/1‑140 (MQ=255)
                                                                         cgcccccccacGGGTCGCCCCCTTCCTCCAAGTCATTTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCg                                             <  2:755921/133‑1 (MQ=255)
                                                                            gCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGgca                                          >  1:696727/1‑140 (MQ=255)
                                                                                    gggccgccCCCTCCCTCCCAGTCATTTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACAcc                                  <  2:6167/136‑1 (MQ=255)
                                                                                     ggTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACACCt                                 >  2:551193/1‑140 (MQ=255)
                                                                                      gTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACACCtt                                >  2:350857/1‑140 (MQ=255)
                                                                                         gcgcCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACACCTtcgt                             >  2:769159/1‑140 (MQ=255)
                                                                                          cgcCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATATTGCGCCCGGCACGCACACCTtcgtc                            >  1:1439097/1‑140 (MQ=255)
                                                                                          cgcCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACACCTtcgtc                            >  1:98721/1‑140 (MQ=255)
                                                                                            ccctccctGCCAGTCATTTTCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACACCTTCGTCgg                          <  2:696727/140‑1 (MQ=255)
                                                                                            ccctccctCCCCTTCAATTCCCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACACCTTCGTCgg                          <  2:1294876/140‑1 (MQ=255)
                                                                                            cccTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACACCTTCGTCgg                          <  2:941093/140‑1 (MQ=255)
                                                                                              cTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACACCTTCGTCGGaa                        <  1:350857/140‑1 (MQ=255)
                                                                                               ttCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACACCTTCGTCGGAAg                       <  1:351255/140‑1 (MQ=255)
                                                                                               ttCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACACCTTCGTCGGAAg                       <  2:480640/140‑1 (MQ=255)
                                                                                                      cattcttttttCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACACCTTCGTCGGAAGTGATCAc                <  2:156231/133‑1 (MQ=255)
                                                                                                      caataattttcCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACACCTTCGTCGGAAGTGATCAc                <  1:119491/133‑1 (MQ=255)
                                                                                                       aGTCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACACCTTCGTCGGAAGTGATCAcc               >  1:698831/1‑140 (MQ=255)
                                                                                                         tCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACACCTTCGTCGGAAGTGATCAc                >  1:606251/1‑137 (MQ=255)
                                                                                                         tCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACACCTTCGTCGGAAGTGATCAc                <  2:606251/137‑1 (MQ=255)
                                                                                                         tCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACACCTTCGTCGGAAGTGATCACCAg             >  2:498068/1‑140 (MQ=255)
                                                                                                         tCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACACCTTCGTCGGAAGTGATCACCAg             >  1:667361/1‑140 (MQ=255)
                                                                                                         tCAATTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACACCTTCGTCGGAAGTGATCACCAg             >  2:141480/1‑140 (MQ=255)
                                                                                                            tttttCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACACCTTCGTCGGAAGTGATCACCAGTCg          <  2:1031822/139‑1 (MQ=255)
                                                                                                            aTTTTCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACACCTTCGTCGGAAGTGATCACCAGTCg          <  1:498068/140‑1 (MQ=255)
                                                                                                             ttttCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACACCTTCGTCGGAAGTGATCACCAGTCGt         <  2:1029401/140‑1 (MQ=255)
                                                                                                             ttttCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACACCTTCGTCGGAAGTGATCACCAGTCGt         <  2:1197404/140‑1 (MQ=255)
                                                                                                             ttttCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACACCTTCGTCGGAAGTGATCACCAGTCGt         <  1:674239/140‑1 (MQ=255)
                                                                                                                tCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACACCTTCGTCGGAAGTGATCACCAGTCGTGAg      <  2:667361/140‑1 (MQ=255)
                                                                                                                tCCCGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACACCTTCGTCGGAAGTGATCACCAGTCGTGAg      <  2:359392/140‑1 (MQ=255)
                                                                                                                  ccGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACACCTTCGTCGGAAGTGATCACCAGTCGTGAGtt    <  1:551193/140‑1 (MQ=255)
                                                                                                                  ccGCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACACCTTCGTCGGAAGTGATCACCAGTCGTGAGtt    <  1:107325/140‑1 (MQ=255)
                                                                                                                    gCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACACCTTCGTCGGAAGTGATCACCAGTCGTGAGTTgg  <  1:141480/140‑1 (MQ=255)
                                                                                                                    gCCAGTACGCTTCAGTGCCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACACCTTCGTCGGAAGTGATCACCAGTCGTGAGTTgg  <  2:98721/140‑1 (MQ=255)
                                                                                                                                    |                                                                                                                           
TAGAGAATAAACAGCGGATCTTCGGCGTTCATCTCTTCCGCCTGGTGCTGATCGCTCGCTTGCTCAACCAGGTCGTGCCACCACAGGTCGCGCCCTTCCTGCCAGTCAATTTTCCCGCCAGTACGCTTCAGTACCACCACATGCTCTACGCTGGTGACGTTCGGGTTTTTCAGCGCGTCATCAACGTTTTTCTTCAGCGGAATACTGCGCCCGGCACGCACACCTTCGTCGGAAGTGATCACCAGTCGTGAGTTGG  >  NC_000913/4286584‑4286839

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A