Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F48 I1 R1
|
62 |
93.4 |
3176452 |
99.2% |
3151040 |
139.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,228,109 |
G→T |
A127S (GCC→TCC) |
yjbB → |
putative inorganic phosphate export protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,228,109 | 0 | G | T | 98.4%
| 203.3
/ ‑3.4
| 61 | A127S (GCC→TCC) | yjbB | putative inorganic phosphate export protein |
| Reads supporting (aligned to +/- strand): ref base G (0/1); new base T (17/43); total (17/44) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.12e-01 |
CGGCTCTGGTCATTGTGCTGGGTGCAGATGTCGGGACGGCGCTAATGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTC > NC_000913/4227972‑4228244
|
cGGCTCTGGTCATTGTGCTGGGTGCAGATGTCGGGACGGCGCTAATGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTCGTTTTTTTCC‑TCGGGCGCCAACAGCCACGcccc > 2:1170541/1‑140 (MQ=255)
ggCTCTGGTCATTGTGCTGGGTGCAGATGTCGGGACGGCGCTAATGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCg < 1:969029/140‑1 (MQ=255)
tGGTCATTGTGCTGGGTGCAGATGTCGGGACGGCGCTAATGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCaa < 1:484551/140‑1 (MQ=255)
aTTGTGCTGGGTACAGATGTCGGGACGGCGCTAATGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAACCAGTCACGCTCCGGGCAACTggg < 2:617640/140‑1 (MQ=255)
ttGTGCTGGGTGCAGATGTCGGGACGGCGCTAATGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGc < 1:817383/140‑1 (MQ=255)
ttGTGCTGGGTGCAGATGTCGGGACGGCGCTAATGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGc < 1:1288223/140‑1 (MQ=255)
tgtgCTGGGTGCAGATGTCGGGACGGCGCTAATGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTTC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGcc > 1:169931/1‑140 (MQ=255)
gCTGGGTGCAGATGTCGGGACGGCGCTAATGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCcgcg > 1:963216/1‑140 (MQ=255)
cTGGGTGCAGATGTCGGGACGGCGCTAATGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGt < 2:1529809/140‑1 (MQ=255)
cTGGGTGCAGATGTCGGGACGGCGCTAATGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGt < 2:144354/140‑1 (MQ=255)
cTGGGTGCAGATGTCGGGACGGCGCTAATGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGt < 2:677508/140‑1 (MQ=255)
cTGGGTGCAGATGTCGGGACGGCGCTAATGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGt < 2:812066/140‑1 (MQ=255)
cTGGGTGCAGATGTCGGGACGGAGCTAATGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGt < 2:594179/140‑1 (MQ=255)
tGCAGATGTCGGGACGGCGCTAATGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGGTTTTTTTTC‑CCGGACGCAAACAGTCACGGCCCGGGCAACTTGGCCGCGTCgggt > 2:793781/1‑138 (MQ=255)
gCAGATGTCGGGACGGCGCTAATGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGTCGGTAt < 1:1479598/140‑1 (MQ=255)
gCAGATGTCGGGACGGCGCTAATGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGTCGGTAt < 2:1172384/140‑1 (MQ=255)
gCAGATGTCGGGACGGCGCTAATGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGTCGGTAt < 2:728242/140‑1 (MQ=255)
aGATGTCGGGACGGCGCTAATGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGTCGGTATTg > 1:990964/1‑140 (MQ=255)
gTCGGGACGGCGCTAATGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGTCGGTATTGGTCt < 1:361377/140‑1 (MQ=255)
tCGGGACGGCGCTAATGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGTCGGTATTGGTCtt > 1:1196691/1‑140 (MQ=255)
cGGGACGGCGCTAATGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTg < 2:1439804/140‑1 (MQ=255)
gggACGGCGCTAATGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGTCGGTATTGGTCtttg > 1:537710/1‑138 (MQ=255)
gggACGGCGCTAATGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTgg > 1:1108889/1‑140 (MQ=255)
gggACGGCGCTAATGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGTCGGGATTGGGCTTgg > 1:390577/1‑140 (MQ=255)
ggACGGCGCTAATGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGGGTCGGTATTGGTCTTggg < 1:1170541/140‑1 (MQ=255)
ggACGGCGCTAATGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTggg < 2:175762/140‑1 (MQ=255)
ggACGGCGCTAATGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTggg < 2:434832/140‑1 (MQ=255)
ggACGGCGCTAATGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTggg < 2:1473944/140‑1 (MQ=255)
cgcTAATGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTTCGGA‑GCCAACAGTCACGCTCCCGGCAACTGGGCCGCGTCGGGATTGGTCTTGGGGTGAtt > 2:1321318/1‑140 (MQ=255)
cgcTAATGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGAtt > 2:148349/1‑140 (MQ=255)
aTGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCt < 1:950169/140‑1 (MQ=255)
cgcgTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAgcg < 1:115669/140‑1 (MQ=255)
cgcgTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAgcg < 2:375869/140‑1 (MQ=255)
cgTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGGAACTGGGCCGCGGCGGGATTGGGCTTGGGCTGCTTTTTCTAGCGCt > 2:1381112/1‑140 (MQ=255)
aTTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGa < 1:908525/140‑1 (MQ=255)
aTTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGa < 2:81319/140‑1 (MQ=255)
tctcACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGt < 1:1321318/140‑1 (MQ=255)
tctcACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGt < 2:36645/140‑1 (MQ=255)
tctcACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGt < 1:1060169/140‑1 (MQ=255)
tgaaCTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATtgtg < 1:731083/137‑1 (MQ=255)
cGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGc > 2:505745/1‑140 (MQ=255)
ttATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGc < 1:793781/140‑1 (MQ=255)
tCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATCGTGCAGGCCGt > 2:1296283/1‑140 (MQ=255)
cTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTaa < 1:773940/140‑1 (MQ=255)
tGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCg < 2:963216/140‑1 (MQ=255)
tCACCGTTACTTATTTTTATCGGCGTGGTTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGTCGGTATTTGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGAt > 2:1112638/1‑140 (MQ=255)
tCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGAt < 2:69518/140‑1 (MQ=255)
cACCGTTACTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTTGGCTGATTTTGCTAGCGCTGGAGTTGATTTTGCAGGCCGTAACGCCGATc > 1:811416/1‑140 (MQ=255)
cACCGTTACTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATc > 2:1458040/1‑140 (MQ=255)
cACCGTTACTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAATCACGCCCCCGGCAACTGGGCCGCGTCGGGATTGGTCTTGGGCTGATTTTTCTAGCGCCGGAGTTTGTTGTGCCAGCCGTAACCCCGATc > 2:755466/1‑140 (MQ=255)
ttACTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGAAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGGGTTGATTGTGCAGGCCGTAAAGCCGATCACCCa > 2:833596/1‑140 (MQ=255)
aCTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAgg > 2:1150584/1‑140 (MQ=255)
ttATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCa > 1:843479/1‑140 (MQ=255)
aTTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCaaa < 1:505745/140‑1 (MQ=255)
aTTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCaaa < 2:990964/140‑1 (MQ=255)
aTTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCaaa < 1:1381112/140‑1 (MQ=255)
aTTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCaaa < 2:1181704/140‑1 (MQ=255)
ttttATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACg < 1:635976/140‑1 (MQ=255)
tATCGGCGTGATTTTTTTCC‑TCGTACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCg < 2:941632/140‑1 (MQ=255)
tATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCg < 1:742976/140‑1 (MQ=255)
tATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCg < 1:148349/140‑1 (MQ=255)
tATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCg < 2:357394/140‑1 (MQ=255)
tCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCGtt < 1:755466/140‑1 (MQ=255)
tCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCGtt < 1:293906/140‑1 (MQ=255)
cGTGGTTTTTTTCC‑TCGGACGCAAACAGACACGCTTCGGGCAACTGGGCCGCGGCCGGATTGGGCTTTGGCTGAATTTGCTAGCGCTGGAGATGGTTGTGCAGGTCGTAACGCCGATCACCCATGCAAACGGCGGTCAgg > 2:1508346/1‑140 (MQ=255)
tCGGACGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCg > 2:641947/1‑140 (MQ=255)
cGCAAACAGTCACGCTCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGAc < 2:898192/140‑1 (MQ=255)
tCACGCTCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACCGGCGatat > 2:862255/1‑140 (MQ=255)
aCGCTCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTc > 2:868506/1‑140 (MQ=255)
|
CGGCTCTGGTCATTGTGCTGGGTGCAGATGTCGGGACGGCGCTAATGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCC‑TCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTC > NC_000913/4227972‑4228244
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
