Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F13 I1 R1
|
185 |
260.8 |
12342668 |
99.6% |
12293297 |
98.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,486,481 |
(A)7→8 |
coding (2108/3594 nt) |
evgS → |
sensory histidine kinase EvgS |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,486,474 | 1 | . | A | 99.2%
| 1031.1
/ 0.3
| 246 | coding (2101/3594 nt) | evgS | sensory histidine kinase EvgS |
| Reads supporting (aligned to +/- strand): ref base . (2/0); new base A (122/122); total (124/122) |
| Fisher's exact test for biased strand distribution p-value = 4.98e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.22e-01 |
Only 100 of 274 total aligned reads displayed.
GCATACATTATGCAATCTTCCTGCAAGTGACAATGCAGTATATATTTGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAG‑AAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGATGAGTCACGAAATAAGAACACCAATAAGCTCTATTATGGG > NC_000913/2486374‑2486568
|
gCATACATTATGCAATCTTCCTGCAAGTGACAATGCAGTATATATTTGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAg > 2:3220193/1‑101 (MQ=255)
gCATACATTATGCAATCTTCCTGCAAGTGACAATGCAGTATATATTTGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAg < 2:3219901/101‑1 (MQ=255)
cATACATTATGCAATCTTCCTGCAAGTGACAATGCAGTATATATTTGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAG‑a < 2:3219610/101‑1 (MQ=255)
cATACATTATGCAATCTTCCTGCAAGTGACAATGCAGTATATATTTGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAG‑a < 1:3219687/101‑1 (MQ=255)
aTACATTATGCAATCTTCCTGCAAGTGACAATGCAGTATATATTTGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAG‑aa > 2:3220196/1‑101 (MQ=255)
aTACATTATGCAATCTTCCTGCAAGTGACAATGCAGTATATATTTGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAG‑aa < 1:3219739/101‑1 (MQ=255)
aTTATGCAATCTTCCTGCAAGTGACAATGCAGTATATATTTGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAG‑aaaaaa > 2:3220199/1‑101 (MQ=255)
tGCAATCTTCCTGCAAGTGACAATGCAGTATATATTTGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAG‑aaaaaaaata < 2:3219870/101‑4 (MQ=255)
tGCAATCTTCCTGCAAGTGACAATGCAGTATATATTTGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAG‑aaaaaaaata < 2:3219888/101‑4 (MQ=255)
tGCAATCTTCCTGCAAGTGACAATGCAGTATATATTTGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAG‑aaaaaaaata > 1:3220203/1‑98 (MQ=255)
aaTCTTCCTGCAAGTGACAATGCAGTATATATTTGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAg < 2:3219956/101‑1 (MQ=255)
aaTCTTCCTGCAAGTGACAATGCAGTATATATTTGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAg > 1:3220205/1‑101 (MQ=255)
aaTCTTCCTGCAAGTGACAATGCAGTATATATTTGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAg > 2:3220207/1‑101 (MQ=255)
ttCCTGCAAGTGACAATGCAGTATATATTTGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGAt < 2:3219712/101‑1 (MQ=255)
ccTGCAAGTGACAATGCAGTATATATTTGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATaa > 2:3220212/1‑101 (MQ=255)
cTGCAAGTGACAATGCAGTATATATTTGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATaaa > 1:3220213/1‑101 (MQ=255)
tGCAAGTGACAATGCAGTATATATTTGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAg > 2:3220216/1‑101 (MQ=255)
cAAGTGACAATGCAGTATATATTTGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGc > 2:3220219/1‑101 (MQ=255)
gTGACAATGCAGTATATATTTGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTAc > 1:3220223/1‑101 (MQ=255)
tGACAATGCAGTATATATTTGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTAcc > 2:3220224/1‑101 (MQ=255)
gACAATGCAGTATATATTTGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCg < 2:3219850/101‑1 (MQ=255)
gACAATGCAGTATATATTTGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCg > 1:3220226/1‑101 (MQ=255)
aCAATGCAGTATATATTTGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGt > 1:3220231/1‑101 (MQ=255)
cAATGCAGTATATATTTGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGtg < 1:3219648/101‑2 (MQ=255)
cAATGCAGTATATATTTGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTa < 1:3219977/101‑1 (MQ=255)
aaTGCAGTATATATTTGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAg > 1:3220234/1‑101 (MQ=255)
aTGCAGTATATATTTGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGc < 2:3219882/101‑1 (MQ=255)
tGCAGTATATATTTGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCa < 2:3219827/101‑1 (MQ=255)
gCAGTATATATTTGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCaa < 2:3219764/101‑1 (MQ=255)
gCAGTATATATTTGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCaa > 2:3220235/1‑101 (MQ=255)
gCAGTATATATTTGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCaa > 2:3220237/1‑101 (MQ=255)
aGTATATATTTGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCaaaa > 1:3220242/1‑101 (MQ=255)
tatataTTTGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAg > 2:3220245/1‑101 (MQ=255)
tatataTTTGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAg > 1:3220244/1‑101 (MQ=255)
atatatTTGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGt < 1:3219723/101‑1 (MQ=255)
atatatTTGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGt > 2:3220249/1‑101 (MQ=255)
tatatTTGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTc < 2:3219937/101‑1 (MQ=255)
atatTTGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCa < 1:3219889/101‑1 (MQ=255)
atatTTGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCa < 2:3219867/101‑1 (MQ=255)
atatTTGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCa > 1:3220252/1‑101 (MQ=255)
tttGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGtt > 1:3220256/1‑101 (MQ=255)
tttGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGtt > 2:3220257/1‑101 (MQ=255)
ttGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGttt < 2:3219924/101‑1 (MQ=255)
ttGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGttt < 1:3219802/101‑1 (MQ=255)
gtgGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCt > 1:3220261/1‑101 (MQ=255)
tgGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTg > 2:3220262/1‑101 (MQ=255)
ggTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTgg > 1:3220265/1‑101 (MQ=255)
ggTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTgg < 2:3219688/101‑1 (MQ=255)
ttGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCa < 2:3219969/101‑1 (MQ=255)
ttGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCa < 1:3219783/101‑1 (MQ=255)
ttGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCa > 2:3220269/1‑101 (MQ=255)
tGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCaa < 2:3219514/101‑1 (MQ=255)
ggCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAAc < 1:3219533/101‑1 (MQ=255)
ggCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAAc < 1:3220033/101‑1 (MQ=255)
gCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACg < 2:3219834/101‑1 (MQ=255)
cAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGa > 1:3220271/1‑101 (MQ=255)
aaGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGAt > 2:3220274/1‑101 (MQ=255)
aaGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGAt > 1:3220277/1‑101 (MQ=255)
gATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGATGa > 1:3220280/1‑101 (MQ=255)
tatTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGATGAGt < 2:3219786/101‑1 (MQ=255)
tatTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGATGAGt > 2:3220282/1‑101 (MQ=255)
tatTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGATGAGt < 1:3219457/101‑1 (MQ=255)
tatTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGATGAGt < 1:3219991/101‑1 (MQ=255)
atTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGATGAGTc > 2:3220284/1‑101 (MQ=255)
atTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGATGAGTc < 2:3219857/101‑1 (MQ=255)
ttACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGATGAGTCa > 1:3220286/1‑101 (MQ=255)
tACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGATGAGTCAc > 1:3220292/1‑101 (MQ=255)
tACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGATGAGTCAc > 1:3220289/1‑101 (MQ=255)
tACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGATGAGTCAc < 1:3219838/101‑1 (MQ=255)
tACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGATGAGTCAc < 2:3219839/101‑1 (MQ=255)
cTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGATGAGTCACGa < 1:3219929/101‑1 (MQ=255)
tGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGATGAGTCACGaa < 1:3219579/101‑1 (MQ=255)
gAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGATGAGTCACGaaa < 2:3220093/101‑1 (MQ=255)
aaaCGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGATGAGTCACGAAAt < 2:3219946/101‑1 (MQ=255)
aaCGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGATGAGTCACGAAATa > 2:3220298/1‑101 (MQ=255)
aaCGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGATGAGTCACGAAATa > 1:3220297/1‑101 (MQ=255)
aCGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGATGAGTCACGAAATaa < 2:3220129/101‑1 (MQ=255)
gcgTGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGATGAGTCACGAAATAAGa > 1:3220301/1‑101 (MQ=255)
tGATCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGATGAGTCACGAAATAAGAaca < 2:3219904/101‑1 (MQ=255)
aTCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGATGAGTCACGAAATAAGAACAcc > 1:3220305/1‑101 (MQ=255)
tCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGATGAGTCACGAAATAAGAACACCa > 2:3220306/1‑101 (MQ=255)
tCTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGATGAGTCACGAAATAAGAACACCa < 1:3219849/101‑1 (MQ=255)
cTAATTAATGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGATGAGTCACGAAATAAGAACACCaa < 2:3219749/101‑1 (MQ=255)
aattaatGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGATGAGTCACGAAATAAGAACACCAATa < 1:3219861/101‑1 (MQ=255)
attaatGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGATGAGTCACGAAATAAGAACACCAATaa > 2:3220311/1‑101 (MQ=255)
ttaatGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGATGAGTCACGAAATAAGAACACCAATAAg < 2:3219822/101‑1 (MQ=255)
ttaatGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGATGAGTCACGAAATAAGAACACCAATAAg > 1:3220313/1‑101 (MQ=255)
taatGCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGATGAGTCACGAAATAAGAACACCAATAAGc > 2:3220314/1‑101 (MQ=255)
gCACTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGATGAGTCACGAAATAAGAACACCAATa < 1:3219913/94‑1 (MQ=255)
aCTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGATGAGTCACGAAATAAGAACACCAATAAGCTCtatt > 1:3220319/1‑101 (MQ=255)
aCTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGATGAGTCACGAAATAAGAACACCAATAAGCTCtatt > 2:3220320/1‑101 (MQ=255)
aCTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGATGAGTCACGAAATAAGAACACCAATAAGCTCtatt < 2:3220013/101‑1 (MQ=255)
cTCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGATGAGTCACGAAATAAGAACACCAATAAGCTCtatta < 1:3220092/101‑1 (MQ=255)
tCGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGATGAGTCACGAAATAAGAACACCAATAAGCTCtattat < 2:3220039/101‑1 (MQ=255)
cGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGATGAGTCACGAAATAAGAACACCAATAAGCTCTATTATg > 2:3220324/1‑101 (MQ=255)
cGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGATGAGTCACGAAATAAGAACACCAATAAGCTCTATTATg > 1:3220326/1‑101 (MQ=255)
cGAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGATGAGTCACGAAATAAGAACACCAATAAGCTCTATTATg < 1:3219960/101‑1 (MQ=255)
gAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGATGAGTCACGAAATAAGAACACCAATAAGCTCTATTATgg < 1:3219892/101‑1 (MQ=255)
gAGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGATGAGTCACGAAATAAGAACACCAATAAGCTCTATTATgg < 1:3219947/101‑1 (MQ=255)
aGGTAGAAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGATGAGTCACGAAATAAGAACACCAATAAGCTCTATTATggg < 1:3219810/101‑1 (MQ=255)
|
GCATACATTATGCAATCTTCCTGCAAGTGACAATGCAGTATATATTTGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAG‑AAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGATGAGTCACGAAATAAGAACACCAATAAGCTCTATTATGGG > NC_000913/2486374‑2486568
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
