Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A10 F54 I0 R2 227 88.8 3424874 95.5% 3270754 127.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP006881 3,118,648 T→G 25.1% K167T (AAA→ACA)  U712_15995 ← NADH dehydrogenase‑like protein yumB

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0068813,118,6480TG25.1% 84.2 / 14.3 57K167T (AAA→ACA) U712_15995NADH dehydrogenase‑like protein yumB
Reads supporting (aligned to +/- strand):  ref base T (16/26);  new base G (13/2);  total (29/28)
Fisher's exact test for biased strand distribution p-value = 2.01e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

AAATGATGCGGACAAGGCTTCTGTCAACGTCATATTCCTTACAGAGCTCCGGCACGCGAGCAGCCAGTTCGCCAAGAAATTCAATTCCCGTAAATCCGGCACCGCCAACAACGATCGTTAACCTGTCCGGCCGTTTTTCCGCTTCCGTATTGTAAGTCGCAAACTGCAGCTCAATATGTTCCCGCAGCAGGCGCGACGTGTTGATGTTGGCAATCGGAAACGCATATTCTTTTAAGCCTTTAATGCCGAACGTTTCAGGCACGG  >  CP006881/3118514‑3118777
                                                                                                                                      |                                                                                                                                 
aaaTGATGCGGACAAGGCTTCTGTCAACGTCATATTCCTTACAGAGCTCCGGCACGCGAGCAGCCAGTTCGCCAAGAAATTCAATTCCCGTAAATCCGGCACCGCCAACAACGATCGTTAACCTGTCCGGCCGttt                                                                                                                                  <  4:350918/136‑1 (MQ=255)
aaaTGATGCGGACAAGGCTTCTGTCAACGTCATATTCCTTACAGAGCTCCGGCACGCGAGCAGCCAGTTCGCCAAGAAATTCAATTCCCGTAAATCCGGCACCGCCAACAACGATCGTTAACCTGTCCGGCCGTTTTTc                                                                                                                               <  6:99674/139‑1 (MQ=255)
  atgatgCGGACAAGGCTTCTGTCAACGTCATATTCCTTACAGAGCTCCGGCACGCGAGCAGCCAGTTCGCCAAGAAATTCAATTCCCGTAAATCCGGCACCGCCAACAACGATCGTTAACCTGTCCGGCCGttttt                                                                                                                                <  3:338077/136‑1 (MQ=255)
  atgatgCGGACAAGGCTTCTGTCAACGTCATATTCCTTACAGAGCTCCGGCACGCGAGCAGCCAGTTCGCCAAGAAATTCAATTCCCGTAAATCCGGCACCGCCAACAACGATCGTTAACCTGTCCGGCCGTTTTTCCg                                                                                                                             <  1:163667/139‑1 (MQ=255)
  atgatgCGGACAAGGCTTCTGTCAACGTCATATTCCTTACAGAGCTACGGCACGCGAGCAGCCAGTTCGCCAAGAAATTCAATTCCCGTAAATCCGGCACCGCCAACAACGATCGTTAACCTGTCCGGCCTTTTTTCCg                                                                                                                             <  7:244767/139‑1 (MQ=255)
  atgatgCGGACAAGGCTTCTGTCAACGGCATATTCCTTACAGCGCTCCGGCACGCGAGCAGCCAGTTCGCCAAGAAATTCAATTCCCGTAAATCCGGCACCGCCAACAACGATCGTTACCCTGTCCGGCCGtgtttacc                                                                                                                             >  6:15717/1‑136 (MQ=255)
     atgCGGACAAGGCTTCTGTCAACGTCATATTCCTTACAGAGCTCCGGCACGCGAGCAGCCAGTTCGCCAAGAAATTCAATTCCCGTAAATCCGGCACCGCCAACAACGATCGTTAACCTGTCCGGCCGTTTTTCCGCtt                                                                                                                          <  2:375940/139‑1 (MQ=255)
     atgCGGACAAGGCTTCTGTCAACGTCATATTCCTTACAGAGCTCCGGCACGCGAGCAGCCAGTTCGCCAAGAAATTCAATTCCAGTAAATCCGGCACCGCCAACAACGATCGTTAACCTGTCCGGCCGTTTTTCCg                                                                                                                             <  3:390812/136‑1 (MQ=255)
          taaaaGGCTTCTTTCAACGTCATATTCATTAAAGAGCTCCGTAAAGCGATCATAAAGTAAGCCAAGAAATTCAATTCCCGTAAATCCGGCACCGCCAACAACGATCTATAACATGTCCGGCCGTTTTTAAGCTTCCGt                                                                                                                      >  8:304971/4‑138 (MQ=255)
              aGGCTTCTGTCAACGTCATATTCCTTACAGAGCTCCGGCACGCGAGCAGCCAGTTCGCCAAGAAATTCAATTCCCGTAAATCCGGCACCGCCAACAACGATCGTTAACCTGTCCGGCCGTTTTTCCGCTTCCGTATTGt                                                                                                                 <  8:215975/139‑1 (MQ=255)
                  ttCTGTCAACGTCATATTCCTTACAGAGCTCCGGCACGCGAGCAGCCAGTTCGCCAAGAAATTCAATTCCCGTAAATCCGGCACCGCCAACAACGATCGTTAACCTGTCCGGCCGTGTTTGCGCTTCCGGATTGt                                                                                                                 >  4:221840/1‑135 (MQ=255)
                    cTGTCAACGTCATATTCCTTACAGAGCTCCGGCACGCGAGCAGCCAGTTCGCCAAGAAATTCAATTCCCGTAAATCCGGCACCGCCAACAACGATCGTTAACCTGTCCGGCCGTTTTTCCGCTTCCGTATTGTAAGTCg                                                                                                           >  7:267061/1‑139 (MQ=255)
                     tGTCAACGTCATATTCCTTACAGAGATCCGGCACGCGAGCAGCCAGTTCGCCAAGAAATTCAATTCACGTAAATCAGGCACCGCCAACAACGATCGTTAACCTGTCCGGCAGATTTACAGCTTCCGGAATGttattct                                                                                                           >  1:143328/1‑132 (MQ=255)
                          aCGTCATATTCCTTACAGAGCTCCGGCACGCGAGCAGCCAGTTCGCCAAGAAATTCAATTCCCGTAAATCCGGCACCGCCAACAACGATCGTTAACCTGTCCGGCCGTTTTTCCGCTTCCGTATTGTAAGTCGCAAACt                                                                                                     >  7:100966/1‑139 (MQ=255)
                           cGTCATATTCCTTACAGAGCTCCGGCACGCGAGCAGCCAGTTCGCCAAGAAATTCAATTCCCGTAAATCCGGCACCGCCAACAACGATCGTTAACCTGTCCGGCCGTTTTTCCGCTTCCGTATTGTAAGTCGCAAACTg                                                                                                    <  5:164571/139‑1 (MQ=255)
                           cGTCATATTCCTTACAGAGCTCCGGCACGCGAGCAGCCAGTTCGCCAAGAAATTCAATTCCCGTAAATCCGGCACCGCCAACAACGATCGTTAACCTGTCCGGCCGTTTTTCCGCTTCCGTATTGTAAGTCGCAAACTg                                                                                                    <  5:153344/139‑1 (MQ=255)
                               atatTCCTTACAGAGCTCCGGCACGCGAGCAGCCAGTTCGCCAAGAAATTCAATTCCCGTAAATCCGGCACCGCCAACAACGATCGTTAACCTGTCCGGCCGTGTTTCCGCGTCCGGATTGTAAGTAGCAAACTGc                                                                                                   >  4:362764/1‑136 (MQ=255)
                               atatTCCTTACAGAGCTCCGGCACGCGAGCAGCCAGTTCGCCAAGAAATTCAATTCCCGTAAATCCGGCACCGCCAACAACGATCGTTAACCTGTCCGGCCGTGTTTACGCTTCCGTATTGTAAGTCGCAAACTGc                                                                                                   >  4:356656/1‑136 (MQ=255)
                                tatTCCTTACAGAGCTCCGGCACGCGAGCAGCCAGTTCGCCAAGAAATTCAATTCCCGTAAATCCGGCACCGCCAACCACGATCGTTAACCTGTCCGGCCGTTTTTCCGCTTCCGTATTGTAAGGCGCAAACTGCa                                                                                                  <  3:263877/136‑1 (MQ=255)
                                tatTCCTTACAGAGCTCCGGCACGCGAGCAGCCAGTTCGCCAAGAAATTCAATTCCCGTAAATCCGGCACCGCCAACAACGATCGTTAACCTGTCCGGCCGTTTTTCCGCTTCCGTATTGTAAGTCGCAAACTGCAGCt                                                                                               <  1:299466/139‑1 (MQ=255)
                                  ttCCTTACAGAGCTCCGGCACGCGAGCAGCCAGTTCGCCAAGAAATTCAATTCCCGTAAATCCGGCACCGCCAACAACGAGCGTTAACCTGTCCGGCCGTGTTAACCCGTCCGGATAGGAAGTCGCAAAATGccg                                                                                                 >  4:263877/1‑133 (MQ=255)
                                      ttACAGAGCTCCGGCACGCGAGCAGCCAGTTCGCCAAGAAATTCAATTCCCGTAAATCCGGCACCGCCAACAACGATCGTTAACCTGTCCGGCCGTTTTTCCGCTTCCGTATTGTAAGTCGCAAACTGCAGCTCAatat                                                                                         >  6:363753/1‑139 (MQ=255)
                                       tACAGAGCTCCGGCACGCGAGCAGCCAGTTCGCCAAGAAATTCAATTCCCGTAAATCCGGCACCGCCAACAACGATCGTTAACCTGTCCGGCCGTTTTTCCGCTTCCGTATTGTAAGTCGCAAACTg                                                                                                    <  2:129830/127‑1 (MQ=255)
                                       tACAGAGCTCCGGCACGCGAGCAGCCAGTTCGCCAAGAAATTCAATTCCCGTAAATCCGGCACCGCCAACAACGATCGTTAACCTGTCCGGCCGTGTTTCCGCTTCCGTATTGTAAGTCGCAAACTg                                                                                                    >  1:129830/1‑127 (MQ=255)
                                        aCAGAGCTCCGGCACGCGAGCAGCCAGTTCGCCAAGAAATTCAATTCCCGTAAATCCGGCACCGCCAACAACGATCGTTAACCTGTCCGGCCGTTTTTCCGCTTCCGTATTGTAAGTCGCAAACTGCAGCTCAATATg                                                                                        <  8:267061/138‑1 (MQ=255)
                                           gagCTCCGGCACGCGAGCAGCCAGTTCGCCAAGAAATTCAATTCCCGTAAATCCGGCACCGCCAACAACGATCGTTAACCTGTCCGGCCGTTTTTCCGCTTCCGTATTGTAAGTCGCAAACTGCAGCTCAATATGt                                                                                       <  3:167498/136‑1 (MQ=255)
                                            agCTCCGGCACGCGAGCAGCCAGTTCGCCAAGAAATTCAATTCCCGTAAATCCGGCACCGCCAACAACGATCGTTAACCTGTCCGGCCGTTTTTCCGCTTCCGTATTGTAAGTCGCAAACTGCAGCTCAATATGTTacc                                                                                   >  6:93968/1‑139 (MQ=255)
                                            agCTCCGGCACGCGAGCAGCCAGTTCGCCAAGAAATTCAATTCCCGTAAATCCGGCACCGCCAACAACGATCGTTAACCTGTCCGGCCGTGTTTGCGCTTCCGTAATGTAAGTAGCCAACAGCAGCTCAAGAttttaca                                                                                   >  6:20442/1‑136 (MQ=255)
                                              cTCCGGCACGCGAGCAGCCAGTTCGCCAAGAAATTCAATTCCCGTAAATCCGGCACCGCCACCAACGATCGTTAACCTGTCCGGCCGTGTTTGCGCTTCCGGATTGTTATTCGCAACCTGCAGCTCAATATGTTCCCgc                                                                                 >  8:268533/1‑139 (MQ=255)
                                              cTCCGGCACGCGAGCAGCCAGTTCGCCAAGAAATTCAATTCCCGTAAATCCGGCACCGCCAACAACGATCGTTAACCTGTCCGGCCGTTTTTCCCCTTCCCGATTGTAAGTCGCAAACAGCAGCGCAATATGTTCCCgc                                                                                 >  7:214714/1‑139 (MQ=255)
                                              cTCCGGCACGCGAGCAGCCAGTTCGCCAAGAAATTCAATTCCCGTAAATCCGGCACCGCCAACAACGATCGTTAACCTGTCCGGCCGTGTTTCCGGGTGCGGTTTTTTAGTAGCAAACGGCAGCTCAAATTGTTACCgc                                                                                 >  5:59145/1‑139 (MQ=255)
                                                 cGGCACGCGAGCAGCCAGTTCGCCAAGAAATTCAATTCCCGTAAATCCGGCACCGCCAACAACGATCGTTAACCTGTCCGGCCGTGTTTGCGGAGCCGTCTTTTAATTAGCAAACAGCACCGCAATATGTTACCgcagc                                                                              >  6:265835/1‑139 (MQ=255)
                                                  ggCACGCGAGCAGCCAGTTCGCCAAGAAATTCAATTCCCGTAAATCCGGCACCGCCAACAACGATCGTTAACCTGTCCGGCCGTTTTTCCGCTTCCGTATTGTAAGTCGCAAACTGCAGCTCAATATGTTCCCgcagca                                                                             <  5:64595/139‑1 (MQ=255)
                                                  ggCACGCGAGCAGCCAGTTCGCCAAGAAATTCAATTCCCGTAAATCCGGCACCGCCAACAACGATCGTTAACCTGTCCGGCCGTGTTTCCCCGTGCGGATTTTAACTAGCAAACAGCCGCGCCAAATGTTCCCcca                                                                                >  4:258556/1‑136 (MQ=255)
                                                   gCACGCGAGCAGCCAGTTCGCCAAGAAATTCAATTCCCGTAAATCCGGCACCGCCAACAACGATCGTTAACCTGTCCGGCCGTTTTTCCGCTTCCCGATTGTAAGTCGCAAACAGCCGCGCAATATGTTCACGcaccag                                                                            >  6:39397/1‑139 (MQ=255)
                                                   gCACGCGAGCAGCCAGTTCGCCAAGAAATTCAATTCCCGTAAATCCGGCACCGCCAACAACGATCGTTAACCTGTCCGGCCGTTTTTACGCGTCCGGTTTGTAATTAGCAAAAAGCAGCTCAAAATTTTACCgcccgag                                                                            >  2:183232/1‑134 (MQ=255)
                                                    cACGCGAGCAGCCAGTTCGCCAAGAAATTCAATTCCCGTAAATCCGGCACCGCCAACAACGATCGTTAACCTGTCCGGCCGTTTTTCCGCTTCCGGATTGTAAGTCGCAAACTGCAGCTCAATATGTTCCCgcag                                                                               >  3:329482/1‑135 (MQ=255)
                                                      cgcgAGCAGCCAGTGCGCCAATAAATTCAATTCCCGTAACTCCGGCACCGCCAACAACGATCGTTAACATGTCCGGCCGTGTTTCCGCATCCGTATTTTTATTCGCAACATGCAGCTGCATATTTTACCgcagcccggg                                                                         >  5:71177/1‑134 (MQ=255)
                                                        cgAGCAGCCAGTTCGCCAAGAAATTCAATTCCCGTAAATCCGGCACCGCCAACAACGATCGTTAACCTGTCCGGCCGTTTTTCCGCTTCCGTATTGTAAGTCGCAAACTGCAGCTCAATATGTTCCCGCAGCAGgc                                                                          <  3:258556/136‑1 (MQ=255)
                                                        cgAGCAGCCAGTTCGCCAAGAAATTCAATTCCCGTAAATCCGGCACCGCCAACAACGATCGTTAACCTGTCCGGCCGTTTTTCCGCTTCCGTATTGTAAGTCGCAAACTGCAGCTCAATATGTTCCCGCAGCAGGcgcg                                                                       <  5:350501/139‑1 (MQ=255)
                                                        cgAGCAGCCAGTTCGCCAAGAAATTCAATTCCCGTAAATCCGGCACCGCCAACAACGATCGTTAACCTGTCCGGCCGTTTTTCCGCTTCCGTATTGTAAGTCGCAAACTGCAGCTCAATATGTTCCCGCAGCAGGcgcg                                                                       <  8:155392/139‑1 (MQ=255)
                                                        cgAGCAGCCAGTTCGCCAAGAAATTCAATTCCCGTAAATCCGGCACCGCCAACAACGATCGTTAACCTGTCCGGCCGTTTTTCCGCTTCCGTATTGTAAGTCGCAAACTGCAGCTCAATATGTTCCCGCAGCAGGcgcg                                                                       <  5:363753/139‑1 (MQ=255)
                                                           gcagcCAGTTCGCCAAGAAATTCAATTCCCGTAAATCCGGCACCGCCAACAACGATCGTTAACCTGTCCGGCCGTGTTTACGCTTGCGGTTTGTAAATAGCCAACAGCAGCACCATAAGTTACCGCAGCAGGcgcg                                                                       >  4:376936/1‑136 (MQ=255)
                                                                 aGTTCGCCAAGAAATTCAATTCCCGTAAATCCGGCACCGCCAACAACGATCGTTAACCTGTCCGGCCGTTTTTCCGCTTCCGGATTGTAAGTCGGAAACTGCAGCGCAATATGTTCCCGCAGCAGGCGCGACGGGTGGa                                                              >  5:137426/1‑139 (MQ=255)
                                                                      gCCAAGAAATTCAATTCCCGTAAATCCGGCACCGCCAACAACGATCGTTAACCTGTCCGGCCGTTTTTCCGCTTCCGTATTGTAATTCGCCAACAGCAGCTCAATATGTTCCCGCACCAGGCGCGCCGGGTTGATg                                                            >  4:131300/1‑136 (MQ=255)
                                                                         aaGAAATTCAATTCCCGTAAATCCGGCACCGCCAACAACGATCGTTAACCTGTCCGGCCGTTTTTCCGCTTCCGTATTGTAAGTCGCAAACTGCAGCTCAATATGTTCCCGCAGCAGGCGCGACGTGTTGATGTTg                                                         <  4:153605/136‑1 (MQ=255)
                                                                         aaGAAATTCAATTCCCGTAAATCCGGCACCGCCAACAACGATCGTTAACCTGTCCGGCCGTGTTTGCGCGTGCGTATTGTAAGTCGCAAACGGCCGCTCAATATGTTCCCGCCGCCGGCGCGCCGTGTTGATGTTGGc                                                       >  2:143146/1‑138 (MQ=255)
                                                                               ttcaattcCCGTAAATCCGGCACCGCCAACAACGATCGTTAACCTGTCCGGCCGTTTTTCCGCTTCCGTATTGTAAGTCGCAAACTGCAGCTCAATATGTTCCCGCAGCAGGCGCGACGTGTTGATGTTGGCAATc                                                   <  4:213637/136‑1 (MQ=255)
                                                                                       ccGTAAATCCGGCACCGCCAACAACGATCGTTAACCTGTCCGGCCGTTTTTCCGCTTCCGTATTGTAAGTCGCAAACTGCAGCTCAATATGTTCCCGCAGCAGGCGCGACGTGTTGATGTTGGCAATCGGAAACGc                                           <  3:221840/136‑1 (MQ=255)
                                                                                       ccGTAAATCCGGCACCGCCAACAACGATCGTTAACCTGTCCGGCCGTGTTTCCGCTTCCGTATTGTAAGTCGCAAACTGCAGCTCAATATGTTCCCGCAGCAGGCGCGACGTGTTGATGTTGGCAATCGGAAACGCata                                        <  5:62178/139‑1 (MQ=255)
                                                                                        ctgaaaTCAGGCACCGCCAACAACGATCGTTAACATGTCAGGACTTTTTTCCGCTTCCGTATTGTAAGTCGCAAACTGCAGCTCAATATGTTCCCGCAGCAGTCGCGACGTGTTGATGTTGGCAATCGGAAACGCatat                                       <  7:24475/136‑1 (MQ=255)
                                                                                                        ccAACAACGATCGTTAACCTGTCCGGCCGTTTTTCCGCTTCCGTATTGTAAGTAGCAAACTGCAGCTCAATATGTTCCCGCAGCAGGCGCGACGTGTTGATGTTGGCAATCGGAAACGCATATTCTTTTAATCCTTTaa                       >  7:115141/1‑139 (MQ=255)
                                                                                                           acaacGATCGTTAACCTGTCCGGCCGTTTTTACGCTTCCGTATTTTAAGTCGCAAACTGCAGCGAAATAATTTACCCCAGCAGGCGCCACGAGTTGAAGTTGGCAAACGGAAACGCAAATTCTTTTAAGCCGTTaa                       >  4:376311/1‑136 (MQ=255)
                                                                                                              acGATCGTTAACCTGTCCGGCCGTTTTTCCGCTTCCGTATTGTAAGTCGCAAACTGCAGCTCAATATGTTCCCGCAGCAGGCGCGACGTGTTGATGTTGGCAATCGGAAACGCATATTCTTTTAAGCCTTTAATGCCGa                 <  5:20442/139‑1 (MQ=255)
                                                                                                              acGATCGTTAACCTGTCCGGCCGTGTTTCCGCTTCCGTATTGTAAGTCGCAAACTGCAGCTCAATCTGTTCCCGCAGCAGGCGCGACGTGGTGATGTTGGCAATCGGAAACGCATATTCTTTTAAGCCTTTAATGc                    <  4:354344/136‑1 (MQ=255)
                                                                                                               cGATCGTTAACCTGTCCGGCCGTTTTTCCGCTTCCGTATTGTAAGTCGCAAACTGCAGCTCAATATGTTCCCGCAGCAGGCGCGACGTGTTGATGTTGGCAATCGGAAACGCATATTCTTTTAAGCCTTTAATGcc                   <  3:131300/136‑1 (MQ=255)
                                                                                                               cGATCGTTAACCTGTCCGGCCGTTTTTCCGCTTCCGTATTGTAAGTCGCAAACTGCAGCTCAATATGTTCCCGCAGCAGGCGCGACGTGTTGATGTTGGCAATCGGAAACGCATATTCTTTTAAGCCTTTAATGCCGaa                <  8:100966/139‑1 (MQ=255)
                                                                                                                          cTGTCCGGCCGTTTTTCCGCTTCCGTATTGTAAGTCGCAAACTGCAGCTCAATATGTTCCCGCAGCAGGCGCGACGTGTTGATGTTGGCAATCGGAAACGCATATTCTTTTAAGCCTTTAATGCCGAACGTTTCAGGCa     <  6:137426/139‑1 (MQ=255)
                                                                                                                          cTGTCCGGCCGTTTTTACGCTTGCGTATTGTAAGTCGCAAACTGCAGCTCAATATGTTCCCCCAGCACGCGCGACGTGTTGATGTTGGCAATCGGTAACGCATATTGTTTTAATCCTTTAAAGCCGAACGTTTCAg        >  3:345267/1‑136 (MQ=255)
                                                                                                                             tCCGGCCGTTTTTCCGCGTCCGGATTGTAAGTCGCAAACTGCAGCTCAATATGTTCCCGCAGCAGGCGCGCCGTGTTGATGTTGGCAATCGGAAACGCATATTCTTTTAAGCCTTTAATGCCGAACGTTTCAGGCACgg  >  6:414491/1‑139 (MQ=255)
                                                                                                                                      |                                                                                                                                 
AAATGATGCGGACAAGGCTTCTGTCAACGTCATATTCCTTACAGAGCTCCGGCACGCGAGCAGCCAGTTCGCCAAGAAATTCAATTCCCGTAAATCCGGCACCGCCAACAACGATCGTTAACCTGTCCGGCCGTTTTTCCGCTTCCGTATTGTAAGTCGCAAACTGCAGCTCAATATGTTCCCGCAGCAGGCGCGACGTGTTGATGTTGGCAATCGGAAACGCATATTCTTTTAAGCCTTTAATGCCGAACGTTTCAGGCACGG  >  CP006881/3118514‑3118777

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A