Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A15 F94 I1 R1
|
19 |
207.6 |
8525636 |
93.6% |
7979995 |
122.4 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913_3_pae_tpiA |
3,431,411 |
T→C |
N2S (AAT→AGT) |
tsaC ← |
tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein, threonine‑dependent ADP‑forming ATPase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913_3_pae_tpiA | 3,431,411 | 0 | T | C | 81.3%
| 423.0
/ 91.6
| 193 | N2S (AAT→AGT) | tsaC | tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein, threonine‑dependent ADP‑forming ATPase |
| Reads supporting (aligned to +/- strand): ref base T (19/17); new base C (80/77); total (99/94) |
| Fisher's exact test for biased strand distribution p-value = 8.56e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.66e-01 |
Only 100 of 195 total aligned reads displayed.
GCTGTTTTAACTCCAACAGTCGCATCACTGCTGTTTCGCTATCAGGATCGCACCCAACACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTATTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGACACTCAGGGCATTCTCCAGCTATGGGTTTGAAGTTAATGGCAA > NC_000913_3_pae_tpiA/3431262‑3431556
|
ttttAACTCCAACAGTCGCATCACTGCTGTTTCGCTATCAGGATCGCACCCAACACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCAc > 3:506934/1‑150 (MQ=255)
cTCCAACAGTCGCATCACTGCTGTTTCGCTATCAGGATCGCACCCAACACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGttatt < 4:506934/150‑1 (MQ=255)
tCCAACAGTCGCATCACTGCTGTTTCGCTATCAGGATCGCACCCAACACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGttatta > 1:764273/1‑150 (MQ=255)
agaGTCGCATCACTGCTGTTTCGCTATCAGGATCGCACCCAACACCGAAAGCGGCTTCCGTTGGATAGGCGATTACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTcc < 2:921036/148‑1 (MQ=255)
aCAGTCGCATCACTGCTGTTTCGCTATCAGGATCGCACCCAACACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTcc > 1:1394294/1‑150 (MQ=255)
aCAGGCGCATCACTGCTGTTTCGCTATCAGGATCGCACCCAACACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTATTCACGTTATTATTcc < 2:525615/150‑1 (MQ=255)
aGTCGCATCACTGCTGTTTCGCTATCAGGATCGCACCCAACACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTccgc < 1:998234/150‑1 (MQ=255)
tCGCATCACTGCTGTTTCGCTATCAGGATCGCACCCAACACCGAACACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTCTTACTCACGTTATTATTccgccg > 3:449666/1‑150 (MQ=255)
aCTGCTGTTTCGCTATCAGGATCGCACCCAACACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTATTCACGTTATTATTCCGCCGAAACCgg > 2:2486630/1‑150 (MQ=255)
tgctgTTTCGCTATCAGGATCGCACCCAACACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTATTCACGTTATTATTCCGCCGAAACCGGCt > 1:1224641/1‑150 (MQ=255)
tgTTTCGCTATCAGGATCGCACCCAACACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTATTCACGTTATTATTCCGCCGAAACCGGCTTTc < 4:258580/150‑1 (MQ=255)
ttCGCTATCAGGATCGCACCCAACACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCcac < 1:2470851/150‑1 (MQ=255)
tATCAGGATCGCACCCAACACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCcaca < 4:1552471/146‑1 (MQ=255)
aGGATCGCACCCAACACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTAc < 4:273828/150‑1 (MQ=255)
tCGCACCCAACACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTATTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGc > 2:1534850/1‑150 (MQ=255)
ccAACACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACaaaa < 2:815856/150‑1 (MQ=255)
ccAACACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACaaaa > 2:2084625/1‑150 (MQ=255)
aaCACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAgt > 2:1042731/1‑150 (MQ=255)
cacCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAgtgt < 3:1524683/150‑1 (MQ=255)
ccGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGttt > 2:680323/1‑150 (MQ=255)
ccGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGttt < 3:745922/150‑1 (MQ=255)
cGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGtttt > 3:1316926/1‑150 (MQ=255)
aaaaCGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCca > 1:841954/1‑121 (MQ=255)
aaaaCGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGTCACAAAAGTGTTTTac < 3:1420748/150‑1 (MQ=255)
aaCGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTATTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTacac < 2:2476222/150‑1 (MQ=255)
ttCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACaaaa > 2:1451793/1‑133 (MQ=255)
ttCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACaaaa < 1:1451793/133‑1 (MQ=255)
ccGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGcgcg < 1:1042731/150‑1 (MQ=255)
cGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCgg < 1:680323/150‑1 (MQ=255)
gTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGt > 4:47292/1‑150 (MQ=255)
ttGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTATTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGtt > 3:1467606/1‑150 (MQ=255)
ggATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTcc > 4:1164799/1‑105 (MQ=255)
ggATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTcc < 3:1164799/105‑1 (MQ=255)
ggATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGtttt < 1:1883138/150‑1 (MQ=255)
gATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTATTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGttttc > 4:362624/1‑150 (MQ=255)
gATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGttttc > 2:1181499/1‑150 (MQ=255)
aGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGttttcttt < 3:682075/150‑1 (MQ=255)
ggCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTATTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGttttctttt < 4:761042/150‑1 (MQ=255)
ggCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGttttctttt < 1:2084625/150‑1 (MQ=255)
gCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCcaca > 2:136731/1‑102 (MQ=255)
gCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGtttt > 3:315665/1‑144 (MQ=255)
gCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGtt < 1:525983/142‑1 (MQ=255)
gCGATGACACGTTCTGCCTATAGAACATCTATCGCAGCTGGGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTGTACTGGCACAAGAGTGTTTTTCTCCCTGCGCGGttttcttttc < 2:58012/150‑1 (MQ=255)
gATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGa < 2:764273/150‑1 (MQ=255)
gATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGa < 1:2635537/150‑1 (MQ=255)
cacGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTATTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGt < 1:1534850/150‑1 (MQ=255)
acGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTCGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTa > 2:2446760/1‑150 (MQ=255)
tcttcATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCgg < 1:2507710/150‑1 (MQ=255)
aTTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGa < 4:1456648/135‑1 (MQ=255)
aTTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAAt > 2:2233848/1‑150 (MQ=255)
aTTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAAt < 3:1558948/150‑1 (MQ=255)
ttGAGAACTTCTATCGCAGCTGCGATAGCCTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTTCACATTGTTTACTTGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATg < 2:2242675/150‑1 (MQ=255)
ttGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTATTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGttt < 4:1178192/108‑1 (MQ=255)
ttGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATg > 3:846453/1‑150 (MQ=255)
tGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTATTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATg < 3:228747/149‑1 (MQ=255)
tGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGa < 3:980148/150‑1 (MQ=255)
agaACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTATTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGaca > 3:893902/1‑150 (MQ=255)
aaCATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTATTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGACACt > 1:1641956/1‑150 (MQ=255)
aCATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGACACTc < 4:846453/150‑1 (MQ=255)
acgcTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCg < 4:1376516/64‑1 (MQ=39)
aTCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTAc < 2:982019/84‑1 (MQ=255)
aTCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGACACTCAg > 3:909632/1‑150 (MQ=255)
aTCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTATTCACGTTATTATTCCGCCGAAACCg > 4:227467/1‑62 (MQ=255)
tCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTATTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACaaaa < 1:2002129/89‑1 (MQ=255)
tCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTATTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACaaaa > 2:2002129/1‑89 (MQ=255)
tCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGttttctttt < 2:1651563/118‑1 (MQ=255)
tCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGtt > 3:1197923/1‑111 (MQ=255)
gCAGCTGCGATAGCGTCTCTTTGCAGGTTATTATTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGACACTCAGGGCATtc > 4:1198911/1‑150 (MQ=255)
gCTGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGACACTCAGGGCATTCTcc > 1:471210/1‑150 (MQ=255)
tGCGATAGCGTCTCTTTGCAGGTTATTATTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGACACTCAGGGCATTCTCCAg < 4:893902/150‑1 (MQ=255)
tGCGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGa > 2:1863920/1‑114 (MQ=255)
cGATAGCGTCTCTTTGCAGGTTATTATTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGa > 2:329841/1‑129 (MQ=255)
cGATAGCGTCTCTTTGCAGGTTATTATTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGa < 1:329841/129‑1 (MQ=255)
cGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACAcc < 4:581297/92‑1 (MQ=255)
cGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACAcc > 3:581297/1‑92 (MQ=255)
cGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGACACTCAgg < 3:1096277/137‑1 (MQ=255)
cGATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGACACTCAgg > 4:1096277/1‑137 (MQ=255)
gATAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGACACTCAGGGCATTCTCCAGCTa > 4:445368/1‑150 (MQ=255)
tAGCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGAGCGGTTTTTTTTTCGATGAGTAGCGGATACTGACACTCAGGGCATTCTCCAGCTATg > 1:1061628/1‑150 (MQ=255)
gCGTCTCTTTGCAGGTTATTATTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGACACTCAGGGCATTCTCCAGCTATggg < 4:414616/150‑1 (MQ=255)
gCGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGACACTCAGGGCATTCTCCAGCTATggg > 2:2312061/1‑150 (MQ=255)
cGTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTG‑TTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAACGACACTCAGGGCATTCTCCAGCTATGGGtt > 2:475731/1‑150 (MQ=255)
gTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGACACTCAGGGCATtctc < 2:454540/138‑1 (MQ=255)
gTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGACACTCAGGGCATtctc > 1:454540/1‑138 (MQ=255)
gTCTCTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGACACTCAGGGCATTCTCCAGCTATGGGtt > 2:951162/1‑150 (MQ=255)
tctcTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGtt < 3:1052223/59‑1 (MQ=255)
tctcTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGtt > 4:1052223/1‑59 (MQ=255)
tctcTTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGACACTCAGGGCATTCTCCAGCTATGGGttt < 1:2280394/150‑1 (MQ=255)
tctTTGCAGGTTATTACTGACGTTATTATTCCGCCGAAACCGGCTTTGCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGttttcttt > 2:1639292/1‑98 (MQ=255)
tctTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTac < 1:1727835/79‑1 (MQ=255)
tctTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGACACTCAGGGCATTCTCCAGCTATGGGTTTGa < 1:1181499/150‑1 (MQ=255)
tctTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGACACTCAGGGCATTCTCCAGCTATGGGTTTGa < 1:2312061/150‑1 (MQ=255)
ctTTGCAGGTTATTATTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGACACTCAGGGCATTCTCCAGCTATGGGTTTGaa < 3:1198911/150‑1 (MQ=255)
ctTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGAt > 1:1637961/1‑113 (MQ=255)
ctTTGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGACACTCAGGGCATTCTCCAGCTATGGGTTTGaa < 1:952883/150‑1 (MQ=255)
tttGCAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGtttt > 2:1595465/1‑92 (MQ=255)
cAGGTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGACACTCAGGGCATTCTCCAGCTATGGGTTTGAAGTTaa < 4:909632/150‑1 (MQ=255)
gTTATTATTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGttttctt < 4:699639/88‑1 (MQ=255)
gTTATTACTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTGGACACCCCGCGCGGGTTGCTGTTCGAAGAGTAGCGGATAAGGACACTCAGGGCAGTCTCCAGCTATGGGTTTGAAGTTAATgg > 1:1330217/1‑150 (MQ=255)
attactCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGACACTCAGGGCATTCTCCAGCTATGGGTTTGAAGTTAATGGcgt > 1:969855/1‑148 (MQ=255)
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GCTGTTTTAACTCCAACAGTCGCATCACTGCTGTTTCGCTATCAGGATCGCACCCAACACCGAAAACGGCTTCCGTTGGATAGGCGATGACACGTTCTTCATTGAGAACATCTATCGCAGCTGCGATAGCGTCTCTTTGCAGGTTATTATTCACGTTATTATTCCGCCGAAACCGGCTTTCCACATTGTTTACTGGCACAAAAGTGTTTTACACCCTGCGCGGTTTTCTTTTCGATGAGTAGCGGATAATGACACTCAGGGCATTCTCCAGCTATGGGTTTGAAGTTAATGGCAA > NC_000913_3_pae_tpiA/3431262‑3431556
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
