Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A5 F1 I1 R1	81	47.9	2225048	94.8%	2109345	113.5

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,873,602	C→T	T10M (ACG→ATG)	yeaK →	aminoacyl‑tRNA editing domain protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,873,602	0	C	T	100.0%	268.0 / NA	77	T10M (ACG→ATG)	yeaK	aminoacyl‑tRNA editing domain protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (38/39); total (38/39)

TGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAACAAAAACAGCCGTTCATGATAACCTTCTGTGGTTGTTTGCTTGTAATCTCAGGAGCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGACGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTCCGCGTCGTTACCCATGAAGCGGTAGGTAAATGTGAAGCGGTGTCAGAAATTCGTGGCACCGCTCTAGGCCAGGGTGCTAAGGCACT  >  NC_000913/1873468‑1873734

tgCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAACAAAAACAGCCGTTCATGATAACCTTCTGTGGTTGTTTGCTTGTAATCTCAGGAGCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCAt                                                                                                                                  >  2:773035/1‑139 (MQ=255)

tgCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAACAAAAACAGCCGTTCATGATAACCTTCTGTGGTTGTTTGCTTGTAATCTCAGGAGCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCAt                                                                                                                                  >  2:436872/1‑139 (MQ=255)

tgCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAACAAAAACAGCCGTTCATGATAACCTTCTGTGGTTGTTTGCTTGTAATCTCAGGAGCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCAt                                                                                                                                  >  2:21865/1‑139 (MQ=255)

tgCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAACAAAAACAGCCGTTCATGATAACCTTCTGTGGTTGTTTGCTTGTAATCTCAGGAGCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCAt                                                                                                                                  >  2:1031188/1‑139 (MQ=255)

tgCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAACAAAAACAGCCGTTCATGATAACCTTCTGTGGTTGTTTGCTTGTAATCTCAGGAGCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCAt                                                                                                                                  >  1:276430/1‑139 (MQ=255)

 gCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAACAAAAACAGCCGTTCATGATAACCTTCTGTGGTTGTTTGCTTGTAATCTCAGGAGCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATc                                                                                                                                 >  2:1023604/1‑139 (MQ=255)

  cGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAACAAAAACAGCCGTTCATGATAACCTTCTGTGGTTGTTTGCTTGTAATCTCAGGAGCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCa                                                                                                                                >  1:913460/1‑139 (MQ=255)

          gCTTCCGATGAGCGTTTATATGTCAATAAGCAGAACAAAAACAGCCGTTCATGATAACCTTCTGTGGTTGTTTGCTTGTAATCGCAGGAGCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTaa                                                                                                                        <  1:217715/139‑1 (MQ=255)

              ccGATGAGCGTTTATATGTCAATAAGCAGAACAAAAACAGCCGTTCATGATAACCTTCTGTGGTTGTTTGCTTGTAATCTCAGGAGCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCTGTTAATcac                                                                                                                    >  1:653847/1‑137 (MQ=255)

              ccGATGAGCGTTTATATGTCAATAAGCAGAACAAAAACAGCCGTTCATGATAACCTTCTGTGGTTGTTTGCTTGTAATCTCAGGAGCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGc                                                                                                                    <  1:980978/139‑1 (MQ=255)

              ccGATGAGCGTTTATATGTCAATAAGCAGAACAAAAACAGCCGTTCATGATAACCTTCTGTGGTTGTTTGCTTGTAATCTCAGGAGCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGc                                                                                                                    >  1:62617/1‑139 (MQ=255)

              ccGATGAGCGTTTATATGTCAATAAGCAGAACAAAAACAGCCGTCCATGATAACCTTCTGTGGTTGTTTGCTTGTAATCTCAGGAGCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGc                                                                                                                    >  1:784387/1‑139 (MQ=255)

               cGATGAGCGTTTATATGTCAATAAGCAGAACAAAAACAGCCGTTCATGATAACCTTCTGTGGTTGTTTGCTTGTAATCTCAGGAGCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCt                                                                                                                   <  2:951916/139‑1 (MQ=255)

                  tGAGCGTTTATATGTCAATAAGCAGAACAAAAACAGCCGTTCATGATAACCTTCTGTGGTTGTTTGCTTGTAATCTCAGGAGCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCTtta                                                                                                                <  1:424255/139‑1 (MQ=255)

                  tGAGCGTTTATATGTCAATAAGCAGAACAAAAACAGCCGTTCATGATAACCTTCTGTGGTTGTTTGCTTGTAATCTCAGGAGCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCTtta                                                                                                                <  2:276430/139‑1 (MQ=255)

                   gggCGTTTATATGTCAATAAGCAGAACAAAAACAGCCGTTCATGATAACCTTCTGTGGTTGTTTGCTTGTAATCTCAGGAGCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCTttat                                                                                                               <  1:835611/137‑1 (MQ=255)

                    aGCGTTTATATGTCAATAAGCAGAACAAAAACAGCCGTTCATGATAACCTTCTGTGGTTGTTTGCTTGTAATCTCAGGAGCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAAt                                                                                                                       >  1:532330/1‑130 (MQ=255)

                    aGCGTTTATATGTCAATAAGCAGAACAAAAACAGCCGTTCATGATAACCTTCTGTGGTTGTTTGCTTGTAATCTCAGGAGCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAAt                                                                                                                       <  2:532330/130‑1 (MQ=255)

                    aGCGTTTATATGTCAATAAGCAGAACAAAAACAGCCGTTCATGATAACCTTCTGTGGTTGTTTGCTTGTAATCTCAGGAGCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCTttatt                                                                                                              >  2:201568/1‑139 (MQ=255)

                      cGTTTATATGTCAATAAGCAGAACAAAAACAGCCGTTCATGATAACCTTCTGTGGTTGTTTGCTTGTAATCTCAGGAGCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCTTtattat                                                                                                            >  2:176660/1‑139 (MQ=255)

                        tttATATGTCAATAAGCAGAACAAAAACAGCCGTTCATGATAACCTTCTGTGGTTGTTTGCTTGTAATCTCAGGAGCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCTTTATTATca                                                                                                          <  1:21865/139‑1 (MQ=255)

                            tatGTCAATAAGCAGAACAAAAACAGCCGTTCATGATAACCTTCTGTGGTTGTTTGCTTGTAATCTCAGGAGCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCTTTATTATCACaag                                                                                                      <  1:1031188/139‑1 (MQ=255)

                             atGTCAATAAGCAGAACAAAAACAGCCGTTCATGATAACCTTCTGTGGTTGTTTGCTTGTAATCTCAGGAGCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCTTTATTATCACaaga                                                                                                     <  1:773035/139‑1 (MQ=255)

                                tCAATAAGCAGAACAAAAATAGCCGGTCCTGATAACCTTCTGTGGTTGTTTGCTTGTAATCTCAGCTGCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCCGCGGTTTATCGCTTTATTATCACaagaatg                                                                                                  >  1:756041/1‑137 (MQ=255)

                                 cAATAAGCAGAACAAAAACAGCCGTTCATGATAACCTTCTGTGGTTGTTTGCTTGTAATCTCAGGAGCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCTTGATGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGt                                                                                                 >  1:664989/1‑139 (MQ=255)

                                          gAACAAAAACAGCCGTTCATGATAACCTTCTGTGGTTGTTTGCTTGTAATCTCAGGAGCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTc                                                                                        >  1:442976/1‑139 (MQ=255)

                                          gAACAAAAACAGCCGTTCATGATAACCTTCTGTGGTTGTTTGCTTGTAATCTCAGGAGCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTc                                                                                        >  2:890273/1‑139 (MQ=255)

                                                aaaCAGCCGTTCATGATAACCTTCTGTGGTTGTTTGCTTGTAATCTCAGGAGCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTCCGcgtc                                                                                  >  2:342238/1‑139 (MQ=255)

                                                  aCAGCCGTTCATGATAACCTTCTGTGGTTGTTTGCTTGTAATCTCAGGAGCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTCCGcgtcgt                                                                                <  2:664989/139‑1 (MQ=255)

                                                  aCAGCCGTTCATGATAACCTTCGGTGGTTGTTTGCTTGTAATCTCAGGGGCGTGAAATGGCGGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCTGTTAATCGCTTTATTATCCCAAGAAGGTGCTGACTTCGGcgtcgt                                                                                <  1:234655/139‑1 (MQ=255)

                                                     gCCGTTCATGATAACCTTCTGTGGTTGTTTGCTTGTAATCTCAGGAGCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTCCGCGTCGTTAc                                                                             >  2:265653/1‑139 (MQ=255)

                                                               aTAACCTTCTGTGGTTGTTTGCTTGTAATCTCAGGAGCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTCCGCGTCGTTACCCATGAAGCg                                                                   <  1:265653/139‑1 (MQ=255)

                                                                 aaCCTTCTGTGGTTGTTTGCTTGTAATCTCAGGAGCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTCCGCGTCGTTACCCATGAAGCggt                                                                 <  2:30373/139‑1 (MQ=255)

                                                                    cTTCTGTGGTTGTTTGCTTGTAATCTCAGGAGCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTCCGCGTCGTTACCCATGAAGCggtagg                                                              <  1:436872/139‑1 (MQ=255)

                                                                        tgtgGTTGTTTGCTTGTAATCTCAGGAGCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTCCGCGTCGTTACCAATGAAGCGGTAGGTaaa                                                          >  1:857134/1‑139 (MQ=255)

                                                                          tgGTTGTTTGCTTGTAATCTCAGGAGCGTGAAATGACTGAAATTGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCTttatta                                                                                                             <  2:464147/87‑1 (MQ=255)

                                                                          tgGTTGTTTGCTTGTAATCTCAGGAGCGTGAAATGACTGAAATTGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCTttatta                                                                                                             >  1:464147/1‑87 (MQ=255)

                                                                             ttgttTGCTTGTAATCTCAGGAGCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCt                                                                                                                   <  2:409308/77‑1 (MQ=255)

                                                                             ttgttTGCTTGTAATCTCAGGAGCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCt                                                                                                                   >  1:409308/1‑77 (MQ=255)

                                                                               gttTGCTTGTAATCTCAGGAGCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTCCGCGTCGTTACCCATGAAGCGGTAGGTAAATGTGAAg                                                   >  1:445669/1‑139 (MQ=255)

                                                                                 ttGCTTGTAATCTCAGGAGCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTCCGCGTCGTTACCCATGAAGCGGTAGGTAAATGTGAAGCg                                                 <  1:201568/139‑1 (MQ=255)

                                                                                 ttGCTTGTAATCTCAGGAGCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTCCGCGTCGTTACCCATGAAGCGGTAGGTAAATGTGAAGCg                                                 <  1:176660/139‑1 (MQ=255)

                                                                                      tGTAATCTCAGGAGCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTCCGCGTCGTTACCCATGAAGCGGTAGGTAAATGTGAAGCGGTGTc                                            >  1:232723/1‑139 (MQ=255)

                                                                                      tGTAATCTCAGGAGCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTCCGCGTCGTTACCCATGAAGCGGTAGGTAAATGTGAAGCGGTGTc                                            >  1:641625/1‑139 (MQ=255)

                                                                                        tAATCTCAGGAGCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTCCGCGTCGTTACCCATGAAGCGGTAGGTAAATGTGAAGCGGTGTCAg                                          <  2:641625/139‑1 (MQ=255)

                                                                                          aTCTCAGGAGCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTCcg                                                                                      <  1:239950/93‑1 (MQ=255)

                                                                                          aTCTCAGGAGCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTCcg                                                                                      >  2:239950/1‑93 (MQ=255)

                                                                                              cAGGAGCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTCCGCGTCGTTACCCATGAAGCGGTAGGTAAATGTGAAGCGGTGTCAGAAATTc                                    >  1:290876/1‑139 (MQ=255)

                                                                                                   gCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTCCGCGTCGTTACCCATGAAGCGGTAGGTAAATGTGAAGc                                                  <  1:425731/120‑1 (MQ=255)

                                                                                                   gCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTCCGCGTCGTTACCCATGAAGCGGTAGGTAAATGTGAAGc                                                  >  2:425731/1‑120 (MQ=255)

                                                                                                    cGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTCCGCGTCGTTACCCATGAAGCGGTAGGTAAATGTGAAGCGGTGTCAGAAATTCGTGGCa                              <  2:62617/139‑1 (MQ=255)

                                                                                                    cGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTCCGCGTCGTTACCCATGAAGCGGTAGGTAAATGTGAAGCGGTGTCAGAAATTCGTGGCa                              >  1:882171/1‑139 (MQ=255)

                                                                                                    cGTGAAATGACGGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGATTTATTATCACAAGAAGGTGCTGACTTCCGCGTCGTTACCCATGAAGCGGTAGGTAAATGTGAAGCGGTGTCAGAAATTCGTGGCa                              >  1:643937/1‑139 (MQ=255)

                                                                                                     gTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTCCGCGTCGTTACCCATGAAGCGGTAGGTAAATGTGAAGCGGTGTCAGAAATTCGTGGCAc                             <  2:643937/139‑1 (MQ=255)

                                                                                                     gTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTCCGCGTCGTTACCCATGAAGCGGTAGGTAAATGTGAAGCGGTGTCAGAAATTCGTGGCAc                             <  1:922791/139‑1 (MQ=255)

                                                                                                      tGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTCCGCGTCGTTACCCATGAAGCGGTAGGTAAATGTGAAGCGGTGTCAGAAATTCGTGGCAcc                            >  2:360013/1‑139 (MQ=255)

                                                                                                      tGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTCCGCGTCGTTACCCATGAAGCGGTAGGTAAATGTGAAGCGGTGTCAGAAATTCGTGGCAcc                            >  2:684456/1‑139 (MQ=255)

                                                                                                      tGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTCCGCGTCGTTACCCATGAAGCGGTAGGTAAATGTGAAGCGGTGTCAGAAATTCGTGGCAcc                            >  2:244345/1‑139 (MQ=255)

                                                                                                         aaTGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTCCGCGTCGTTACCCATGAAGCGGTAGGTAAATGTGAAGCGGTGTCAGAAATTCGTGGCACCGct                         <  1:684456/139‑1 (MQ=255)

                                                                                                         aaTGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTCCGCGTCGTTACCCATGAAGCGGTAGGTAAATGTGAAGCGGTGTCAGAAATTCGTGGCACCGct                         <  1:977650/139‑1 (MQ=255)

                                                                                                          aTGACTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTCCGCGTCGTTACCCATGAAGCGGTAGGTAAATGTGAAGCGGTGTCAGAAATTCGTGGCACCGctc                        <  2:442976/139‑1 (MQ=255)

                                                                                                              cTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTCCGCGTCGTTACCCAtc                                                                        <  2:682773/87‑2 (MQ=255)

                                                                                                              cTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTCCGCGTCGTTACCCATg                                                                        >  1:682773/1‑87 (MQ=255)

                                                                                                              cTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTCCGCGTCGTTACCCATGAAg                                                                     >  2:267644/1‑90 (MQ=255)

                                                                                                              cTGAAA‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTCCGCGTCGTTACCCATGAAg                                                                     <  1:267644/90‑1 (MQ=255)

                                                                                                                  aa‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTCCGCGTCGTTACCCATGAAGCGGTAGGTAAATGTGAAGCGGTGTCAGAAATTCGTGGCACCGCTCTAGGCCAg                <  2:784387/139‑1 (MQ=255)

                                                                                                                  aa‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTCCGCGTCGTTACCCATGAAGCGGTAGGTAAATGTGAAGCGGTGTCAGAAATTCGTGGCACCGCTCTAGGCCAg                <  2:913460/139‑1 (MQ=255)

                                                                                                                   a‑TGGCTAAAGGAAGCGTGATGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTCCGCGTCGTTACCCATGAAGCGGTAGGTAAATGTGAAGCGGTGTCAGAAATTCGTGGCACCGCTCTAGGCCAgg               <  2:882171/139‑1 (MQ=255)

                                                                                                                            aGGAAGCGTGATGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTCCGCGTCGTTACCCATGAAGCg                                                                   >  1:158237/1‑79 (MQ=255)

                                                                                                                            aGGAAGCGTGATGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTCCGCGTCGTTACCCATGAAGCg                                                                   <  2:158237/79‑1 (MQ=255)

                                                                                                                             ggAAGCGTGATGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTCCGCGTCGTTACCCATGAAGCGGTAGGTAAATGTGAAGCGGTGTCAGAAATTCGTGGCACCGCTCTAGGCCAGGGTGCTAAgg      <  2:445669/139‑1 (MQ=255)

                                                                                                                               aaGCGTGATGCATCAGCGGTTTATCGCTTTATTATCACAAGAAGGTGCTGACTTCCGCGTCGTTACCCATGAAGCGGTAGGTAAATGTGAAGCGGTGTCAGAAATTCGTGGCACCGCTCTAGGCCAGGGTGCTAAGGCa    <  2:653847/139‑1 (MQ=255)

                                                                                                                               aaGCGTGATGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTCCGCGTCGTTACCCATGAAGCGGTAGGTAAATGTGAAGCGGTGTCAGAAATTCGTGGCACCGCTCTAGGCCAGGGTGCTAAGGCa    <  1:1023604/139‑1 (MQ=255)

                                                                                                                               aaGCGTGATGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTCCGCGTCGTTACCCATGAAGCGGTAGGTAAATGTGAAGCGGTGTCAGAAATTCGTGGCACCGCTCTAGGCCAGGGTGCTAAGGCa    <  1:883179/139‑1 (MQ=255)

                                                                                                                                 gCGTGATGCATGAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTACGcgtcgt                                                                                >  1:642847/1‑61 (MQ=255)

                                                                                                                                 gCGTGATGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTCCGcgtcgt                                                                                <  2:642847/61‑1 (MQ=255)

                                                                                                                                 gCGTGATGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTCCGCGTCGTTACCCATGAAGCGGTAGGTAAATGTGAAGCGGTGTCAGAAATTCGTGGCACCGCTCTAGGCCAGGGTGCTAAGGCACt  >  1:334109/1‑139 (MQ=255)

TGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAACAAAAACAGCCGTTCATGATAACCTTCTGTGGTTGTTTGCTTGTAATCTCAGGAGCGTGAAATGACTGAAA‑TGGCTAAAGGAAGCGTGACGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTCCGCGTCGTTACCCATGAAGCGGTAGGTAAATGTGAAGCGGTGTCAGAAATTCGTGGCACCGCTCTAGGCCAGGGTGCTAAGGCACT  >  NC_000913/1873468‑1873734

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A