Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F380 I3 R1
|
13 |
150.7 |
7817698 |
91.1% |
7121922 |
99.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| JC JC |
NC_000913 |
1,292,989 |
IS1 (+) +8 bp |
intergenic (‑67/‑531) |
hns ← / → tdk |
global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
NC_000913 |
= 291401 | NA (NA) | 144 (0.960) |
87/196 |
0.4 |
100% |
noncoding (1/768 nt) |
IS1 |
repeat region |
| ? | NC_000913 |
= 1292996 |
0 (0.000) | intergenic (‑74/‑531) |
hns/tdk |
global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase |
| * |
? |
NC_000913 |
= 1050545 | NA (NA) | 148 (0.990) |
91/196 |
0.2 |
100% |
noncoding (768/768 nt) |
IS1 |
repeat region |
| ? | NC_000913 |
1292989 = |
0 (0.000) | intergenic (‑67/‑538) |
hns/tdk |
global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase |
Only 100 of 144 total aligned reads displayed.
CAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/291304‑291401
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGCACTTAAAATTCTG < NC_000913/1292996‑1292899
CAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCC > 2:137092/1‑99
GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTA < 1:1017603/99‑1
TGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCCTCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCA > 2:3017237/1‑99
TGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCA > 1:2009620/1‑99
TGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCA < 1:2311815/99‑1
GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCAC < 2:2928756/99‑1
GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCAC < 2:2606181/99‑1
ACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAA < 2:646549/99‑1
ACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAA < 1:126147/99‑1
AGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACT > 2:1872922/1‑99
AGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACT > 1:3174906/1‑99
GAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGA > 1:2016640/1‑99
GAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGA < 1:3218562/99‑1
GAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGA < 1:6064/99‑1
GAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGA > 1:881985/1‑99
AGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAA < 1:3727366/99‑1
GGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATT > 1:833188/1‑99
CAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAA < 1:1484902/99‑1
CAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAA < 2:2871319/99‑1
GCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGG < 2:1693082/99‑1
TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCT < 1:2847010/99‑1
TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTAAAGGCT > 1:2948995/1‑99
ATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTACGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGACTCT > 2:450244/1‑99
ATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCT > 2:1207834/1‑99
ATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCT > 1:1952412/1‑99
TAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTA < 1:1467425/99‑1
TAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTA < 1:1115059/99‑1
AGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACATCTGAATTTAAGGCTCTAT > 2:3170217/1‑99
AAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTA > 1:592785/1‑99
AAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTA > 1:1661899/1‑99
AAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAAGCAGAAAGTCGGCAGCATCACCCTATTGCACACATGAATTTAAGGCTCTAGTA > 2:3331900/1‑99
AACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTAT < 1:2175912/99‑1
ACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATT > 1:1050456/1‑99
ACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATT < 1:547556/99‑1
AAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCT > 1:3866238/1‑99
GCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCA > 1:151115/1‑99
CCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAA > 2:1469692/1‑99
CACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAAC < 2:1348262/99‑1
CTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAA < 2:1564081/99‑1
TGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAta < 2:2508120/99‑3
GGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAAC < 2:2490893/99‑1
CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCC > 1:2063418/1‑99
CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCC > 1:2504336/1‑99
CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCA > 1:352418/1‑99
CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCA > 1:523245/1‑99
TCACAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCCCCCCAA < 2:833063/99‑1
TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAA > 2:1666663/1‑99
TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAA > 1:3933424/1‑99
TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAA > 1:3128089/1‑99
TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAA > 2:1832384/1‑99
TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAA > 1:1909195/1‑99
CAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAAT < 1:835120/99‑1
CAAAAACACCATCATACACTAAATCAGTAAGTTGGAAGCATCACCCTATTGCAGAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAAT > 2:3610811/1‑99
ACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTT > 2:3303095/1‑99
CCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTT < 1:1544372/99‑1
CATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTG > 2:525676/1‑99
CATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTG > 1:1026224/1‑99
CATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTG < 1:1150232/99‑1
CATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTG > 1:27207/1‑99
CATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCACTATTATTACCTCAACAAACCACCCCAATATAAGTTTG > 1:648438/1‑99
TCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAAATGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAG < 2:3601868/99‑1
CATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGA < 2:2788654/99‑1
TACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAAAAAACCACCCCAATATAAGTTTGAGATT > 2:589233/1‑99
ACACTAAATCCGTAAGTTTGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCACTATAACTTCGAGATTA > 2:2023369/1‑99
ACACTAAATCAGTCAGTTGGCATCACCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTGCCTCAACAAACCACCCCAATATAAGTTTGAGATTA < 2:385913/99‑1
ACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTA > 1:2466721/1‑99
ACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACCACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACT > 2:438682/1‑99
ACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACT > 1:2789254/1‑99
CTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTA < 1:1980056/99‑1
TAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCGCCCCAATATAAGTTTGAGATTACTAC < 1:2580845/99‑1
TAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTAC > 2:1008379/1‑99
TAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTAC > 1:369568/1‑99
AAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACA > 1:1831475/1‑99
ATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAAT > 2:2060545/1‑99
ATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAAT < 2:412070/99‑1
TCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATG > 1:1260837/1‑99
CAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGA > 2:1226289/1‑99
GTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGC > 1:1632676/1‑99
TAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAGACCACCACAATATAAGTTTGAGATTACTACAATGAGCG < 2:1469961/99‑1
TAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCG > 1:3185481/1‑99
TAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCG < 1:35293/99‑1
TAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCG > 1:1740430/1‑99
TAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCG < 2:3730774/99‑1
TAAGTTGGCAGCATCACCCTATTCCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCACTATAAGTTTGAGATCACTACAATGAGCG > 2:2577575/1‑99
AGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAA < 1:3526474/99‑1
AGTGGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCGCTATTATTACCTCAAGAAACCACCCCAATATAAGTGTGAGATTACTACATTAGGCGAA > 2:1553084/1‑99
TTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGC > 2:2768408/1‑99
TTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGC < 1:1289854/99‑1
GGCAGCATCACCCTACCGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCGCCCCAATATGAGTTTGAGATTACTACAATGAGCGAAGCAC < 2:1043761/99‑1
GCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGCACT > 1:1293584/1‑99
ATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGCACTTAAAA > 2:3343134/1‑99
TCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGCACTTAAAAT > 1:1607322/1‑99
TCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGCACTTAAAAT > 1:2850448/1‑99
CACCCTATTGCACAGCTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTATAATGAGCGAAGCACTTAAAATT < 1:3049025/99‑1
ACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGCACTTAAAATTC > 2:2525079/1‑99
ACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGCACTTAAAATTC < 1:3342232/99‑1
CCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCACCAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGCACTTAAAATTCT > 2:850023/1‑99
CCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGCACTTAAAATTCT < 2:2205180/99‑1
CCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGCACTTAAAATTCT < 2:556356/99‑1
CCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGCACTTAAAATTCTG < 1:1301174/99‑1
CAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/291304‑291401
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGCACTTAAAATTCTG < NC_000913/1292996‑1292899
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
|---|
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |
GATK/CNVnator alignment
N/A
