Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F380 I2 R1
|
12 |
199.9 |
10273419 |
92.0% |
9451545 |
99.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| JC JC |
NC_000913 |
1,292,989 |
IS1 (+) +8 bp |
intergenic (‑67/‑531) |
hns ← / → tdk |
global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
NC_000913 |
= 291401 | NA (NA) | 176 (0.890) |
104/196 |
0.3 |
99.4% |
noncoding (1/768 nt) |
IS1 |
repeat region |
| ? | NC_000913 |
= 1292996 |
1 (0.010) | intergenic (‑74/‑531) |
hns/tdk |
global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase |
| * |
? |
NC_000913 |
= 1050545 | NA (NA) | 189 (0.950) |
99/196 |
0.5 |
99.4% |
noncoding (768/768 nt) |
IS1 |
repeat region |
| ? | NC_000913 |
1292989 = |
1 (0.010) | intergenic (‑67/‑538) |
hns/tdk |
global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase |
Only 100 of 176 total aligned reads displayed.
GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/291306‑291401
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGCACTTAAAATTCTG < NC_000913/1292996‑1292899
GTAGCTGAACAGGAGGGACAGCTGATAGAGACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTc > 2:4244426/1‑98
GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTA < 2:737743/99‑1
GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTA > 1:1249661/1‑99
GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTA < 2:693522/99‑1
TAGCTGAACAGGAGGGCCAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTAT < 1:4788302/99‑1
TAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTAT > 2:4473110/1‑99
GCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTG > 2:3698297/1‑99
CTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGC > 1:65658/1‑99
CTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGC < 1:1708728/99‑1
CTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGC > 2:2604874/1‑99
CTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGC > 1:231144/1‑99
TGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCA < 2:3997896/99‑1
TGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCA > 2:439412/1‑99
CAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAAC > 2:797815/1‑99
GAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTCTTGCACAACTGA > 1:2792470/1‑99
GGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATT > 1:2908379/1‑99
CAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAA < 1:3919911/99‑1
AGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAG < 1:2537921/99‑1
GCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGG < 1:326354/99‑1
GCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGG < 1:4216945/99‑1
GATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTCTTGCACAACTGAATTTAAGGCTC > 2:3665524/1‑99
GATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTC < 2:1146781/99‑1
ATAGAAACAGACGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCT > 2:4889618/1‑99
TAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTA > 2:651377/1‑99
TAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTA < 1:815794/99‑1
AGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTAT > 1:2055812/1‑99
AGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTAT > 1:2598199/1‑99
GAAACAGAAGCCACTGGAGCACCTCCAAAACACCATCATACACTAAAGCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATT > 2:4552715/1‑99
GAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATT > 1:3765207/1‑99
AAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTA > 1:4369590/1‑99
AACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTAT > 1:3922458/1‑99
AACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTAT > 1:405730/1‑99
ACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATT < 2:3816311/99‑1
CAGAAGCCACTGGAGCGCCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTA < 1:726078/99‑1
CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTA < 1:3186268/99‑1
GAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACC > 2:4222080/1‑99
AAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCT > 2:2452623/1‑99
AGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTCTTGCACAACTGAATTTAAGGCTCTATTATTACCTC > 2:219521/1‑99
AGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTC < 1:2197080/99‑1
CCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAA > 2:2086446/1‑99
CACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAAC < 1:4900311/99‑1
CACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAAC < 2:2885496/99‑1
ACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACA > 2:3223811/1‑99
ACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACA > 1:661694/1‑99
CTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAA > 2:2454781/1‑99
TGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAA < 1:24130/99‑1
GGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAAC < 1:2495670/99‑1
GGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAAC < 2:1068613/99‑1
GGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAAC < 1:653053/99‑1
GGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAAC < 2:50314/99‑1
GGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAAC < 2:4155907/99‑1
GAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACC > 1:925049/1‑99
GAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACC > 2:2659882/1‑99
CACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACC > 1:2335435/1‑99
tCCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCC < 2:2209120/98‑1
ACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCC < 1:3538017/99‑1
TCAAAAACCCCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAA < 2:1535663/99‑1
TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAA < 1:3066621/99‑1
TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAA > 1:401999/1‑99
TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAA > 2:1744646/1‑99
TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAA < 2:1801288/99‑1
CAACAACACCATCATACACTAAATCAGTAAGTTAGCAGCATCACCCTATCGCACAACTGAATTTAAGGCTCTATTCTTACCTCAACAAACCACCCCAAT < 2:2780951/99‑1
AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATA > 1:1043851/1‑99
AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATA > 1:1143613/1‑99
AAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATAT < 2:2745453/99‑1
AAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATA > 2:2993041/1‑99
AACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAA < 2:963896/99‑1
AACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAA < 1:5119092/99‑1
ACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAG > 2:3192784/1‑99
CCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTT < 2:1204721/99‑1
CATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTG > 1:3594149/1‑99
CATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTG > 1:1393869/1‑99
CATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTG > 2:4536964/1‑99
CATCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATATAATGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTG > 2:4745790/1‑99
TCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAG < 2:2731618/99‑1
TCATACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAG < 1:1024843/99‑1
ACACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTA < 1:2385677/99‑1
ACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACT > 2:1457428/1‑99
ACTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACT > 2:1634692/1‑99
CTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTA < 2:1221683/99‑1
CTAAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACAACCCCAATATAAGTTTGAGATTACTA > 2:3789549/1‑99
AAATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACA < 2:2301749/99‑1
AATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAA > 1:3557502/1‑99
ATCAGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAAT < 1:265367/99‑1
AGTAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAG < 1:2226486/99‑1
TAAGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCG > 1:3438172/1‑99
AGTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAA > 1:4660986/1‑99
GTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAG > 1:3409383/1‑99
GTTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAG > 1:1547015/1‑99
TTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGC > 1:4137195/1‑99
TTGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGC < 1:4538101/99‑1
TGGCAGCATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGCA < 1:4967735/99‑1
CATCACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGCACTTAAA > 1:128785/1‑99
CACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGCACTTAAAATT < 1:993628/99‑1
CACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGCACTTAAAATT > 1:584330/1‑99
ACCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCAAATATAAGTTTGAAATTACTACAATGAGCGAAGCAAATAAAATTC > 2:885911/1‑99
CCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGCACTTAAAATTCT < 2:4538763/99‑1
CCCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGCACTTAAAATTCT > 2:4573888/1‑99
CCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGCACTTAAAATTCTG < 2:2308147/99‑1
CCTATTGCACAACCGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGCACTTAAAATTCTG > 1:2640625/1‑99
GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/291306‑291401
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGCACTTAAAATTCTG < NC_000913/1292996‑1292899
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
|---|
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |
GATK/CNVnator alignment
N/A
