Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F9 I0 R1
|
177 |
96.4 |
2178490 |
87.4% |
1904000 |
226.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,184,543 |
C→A |
100% |
P1100Q (CCG→CAG) |
rpoB → |
RNA polymerase, beta subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,184,543 | 0 | C | A | 100.0%
| 304.0
/ ‑6.7
| 86 | P1100Q (CCG→CAG) | rpoB | RNA polymerase, beta subunit |
| Reads supporting (aligned to +/- strand): ref base C (0/1); new base A (50/35); total (50/36) |
| Rejected as polymorphism: E-value score below prediction cutoff. |
| Rejected as polymorphism: Frequency below/above cutoff threshold. |
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. |
GAAACACGAGTTCGAGAAGAAACTCGAAGCGAAACGCCGCAAAATCACCCAGGGCGACGATCTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCAGCGATGAAGAAGTTATGCGTCTGGCTGAAAACCTGCGCAA > NC_000913/4184307‑4184777
|
gAAACACGAGTTCGAGAAGAAACCTGAAGCGAAACGCCGCAAAATCACCCAGGGCGACGATCTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGc < 1:697960/239‑1 (MQ=255)
gTTCGAGAAGAAACTCGAAGCGAAACGCCGCAAAATCACCCAGGGCGACGATCTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTa > 1:845907/1‑238 (MQ=255)
cGAGAAGAACCTCGAAGCGAAACGCCGCAAAATCCCCCAGGGCGACGGTCTGGCCCCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGt < 2:631889/239‑1 (MQ=255)
cGAAAAGAAACCCCAAGTAACACGGCGCAAAATCACCCAGGGCGACGATCCGGCCCCGGTGCTGCTGAAGATTTTTAAGGTATATCTGGCGGTTAAACGCCGTAGCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGt < 2:608396/239‑1 (MQ=255)
gaagaaACTCGAAGGGAAACGCCGGAAAATCACCCAGGGCGACGATCTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGtct < 1:380984/238‑1 (MQ=255)
aaCGCCCGAAAATTCCCCAGGGCGACGATCTGGCACCGGGCGTGCTGAAGATTGTGAAGGTATATCTGGCGGTTAAACGCCGTAGCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAg < 2:323662/239‑1 (MQ=255)
aCGCCGCAAAATCACCCAGGGCGACGATCTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGAAGCAATCGTACGGAACCAGCTGGGCGTACCGTCCCGTATGAAAATCGGCCAg > 2:676922/1‑238 (MQ=255)
aaaTCCCCCAGGGGGATGATTTTGGCCCGGGCGGGCTGAAGATTGTTAAGGTATATCGGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGaa < 2:1039376/239‑1 (MQ=255)
tcccccAGGGCTACGGTCTGGCAACGGGCGTGCTTAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAAcc < 1:202177/236‑1 (MQ=255)
cccccGGGCGCCGTCCGGGCACCCGGGGTTCTGAAGGTTGGTAAGGTATGTTTGGCGGTTTAACGCCGTATCCAGCCTTGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAAATTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCa < 2:671651/238‑1 (MQ=255)
cccAGGGCGATCATCTGGCAACGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCAc < 1:226509/239‑1 (MQ=255)
cccAGGGCGACGATCTGGCCCCGGGCGTTCTGAAGATTGTTAATGTATAGCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCAc < 1:808877/239‑1 (MQ=255)
tGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGCCAGATCCTCGAAACCCACCTGGGTaagccggcg > 1:326174/1‑231 (MQ=255)
tGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGGACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCCGGGGATGGcgggg > 2:468591/1‑235 (MQ=255)
ggCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACAAGCTGGGCGTACAGTCTCGAATGAAAATCGGTCAAATCCTCGAAACCAACCTGGGTATGGCTGCGAAAgcga > 1:902857/1‑235 (MQ=255)
ggCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTCAAACGCCGCATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGAAGACATCGTACTGAACCAGCTGGGAGTACCGTCCCGTATGAACATAGGTCGAATCCTCGAAACCCACCCGGGGATGGGCGGGAAAggaac > 2:363859/1‑236 (MQ=255)
tGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACACCGTACTGAACCACCTGGGCGTACCGTCCCGTATGAACATCGGTCAGAACCTCGAAACCCACCTGGGTATGGCCGGGAAAgggaatggg > 2:865468/1‑232 (MQ=255)
tttAAAGTATATCGGGTGGTTAAACGGCGTGTCCAGCCTGGTGAAAAGATGGCAGGGCGTCAAGGTAACAAGGGTGTAATTTCTAAGATAAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGACCCAGCTGGGCGTTCCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCaa < 2:904005/238‑1 (MQ=255)
taGGTTTTTCTTGCGGTTAAACGCCGTATTCAGACGGGTGCCAAGGTAGCAGGTCGTCACGGGAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGCTCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGc < 2:594960/238‑1 (MQ=255)
aaGGTTTTTCTGGCGGGTAAACCGCGTTTCAGGCCCTGTGAAAAGATGGCAGGTCCGTACGGTAACAAGGGGTTAATTTCTAAGAACAACCCGATCGAAGATATGCCTTACGATGAAAACGGTGCGGCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGc < 2:708811/239‑1 (MQ=255)
aaGGTATATCTGGCGGTTAAGCGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGc < 1:199295/239‑1 (MQ=255)
aaGGGATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGAAAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGc < 1:676922/239‑1 (MQ=255)
tatCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTAAGGCGCCGGAAGGGATCGGGG‑ACAAAATTCACGCCaacat > 1:871862/1‑235 (MQ=255)
cGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑CCACGATCAACGCCATGCTGAAAca > 1:367826/1‑238 (MQ=255)
cGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGaaaacg > 1:376155/1‑236 (MQ=255)
cGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGAATCGGCG‑ACACGATCAACGCCATGCTGAAAcag > 1:143342/1‑239 (MQ=255)
ggTTAAACGCCGTTTCCAGGCTGGGGAAAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAAcag < 2:376155/238‑1 (MQ=255)
ggTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGCAAGGTATCGGCG‑GCAAGATCAACGCCAAGCTGAAAcagc > 1:669640/1‑239 (MQ=255)
ccTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGGGCAAAAGA‑CAACGCCATGCCGAAACAGCAGAaaaaaggagggaaaag > 2:478689/1‑229 (MQ=255)
ccTGGGGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGACCAACGCCCTGCTGAAACACCAGACAGAAAGCGCGAAAcc > 2:209469/1‑238 (MQ=255)
gTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTgcgc > 1:229655/1‑239 (MQ=255)
tGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCAc > 1:767818/1‑160 (MQ=255)
tGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCAc < 2:767818/160‑1 (MQ=255)
cAAGATGGCAGGTCGTCACGGTAGCAAGGGTATAATTTCGAAGATCAACCCGGTCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAACCCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCTAAACTGCGCGaa < 1:719910/238‑1 (MQ=255)
gATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTc > 1:344304/1‑238 (MQ=255)
tGGCAGGTGGTCAGGTTAAAAAGGGTTGAATTTTTAAAATCAACCCGATCGAAGATATGCCTTCCGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGAGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATc < 2:150251/239‑1 (MQ=255)
tcgtcACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGAACGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAgcg < 1:232184/237‑1 (MQ=255)
tccgtaCGGTAACAAGGTTGTAATTTCTAAGGTCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACCTCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAgcg < 2:367826/232‑1 (MQ=255)
aCGGTAACCAGGGTGTAATTTCTAAGACCAACCCGATCGAAGATATGCCTTACGATTAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTAc < 1:363859/239‑1 (MQ=255)
aCGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGCAc > 1:998499/1‑239 (MQ=255)
tAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTAAGATCCTCGAAAACAACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAAAAGCAGCAAAAAGTCGGGAAACGAGGCGAAATCATCAAACGGGCGGAcaaac > 2:672528/1‑235 (MQ=255)
gtgtAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGAACGACCTGGGCGCt > 1:460113/1‑239 (MQ=255)
tgtAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTg > 1:334329/1‑239 (MQ=255)
gtAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑CCAAGATCAACGCCATGCTGAAAACGAAGCAAGAAACCGCCAAACTGCGCGAATTCCACCAGCGTGCGTACGATCCGGgggcggc > 2:661651/1‑236 (MQ=255)
gtAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCCTCCACCGGGCGAACGAACTGGgcgcggg > 2:1084692/1‑236 (MQ=255)
gtAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAATCCGGAAACTTCCGGAATTCATCCAGCGGGCGTAAGGTTTGGgcccgga > 1:351599/1‑234 (MQ=255)
tAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAAATGCGCGAATTCATCAAGCGGGCGTCCGATCTGGGGGCTGACGTTGGTc > 1:28341/1‑239 (MQ=255)
ccccccGTTCGAAGATATGCCTTCGGATGAAACCGGGTCGCCGGTAGCACTCGTACTGAACCCTCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGGGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAg < 2:722485/236‑1 (MQ=255)
aaCCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGGCAGAAAga > 1:728386/1‑238 (MQ=255)
cccGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCGGACGTTCGTCAGAAAGtt > 1:1062628/1‑238 (MQ=255)
tccaaGAGATGCCTTGCGATGAAAAAGGTACGCGGGAAGGACTCGGAATGAACCAGGCGGGCGTACCGCCTCGTATGAACATCGGTCAGATCCCCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCT‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTg < 2:814509/236‑1 (MQ=255)
tCGAAGATATGCCTTACGATGAAAACGGTTCGCCGGTAAACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGGGCGTACGATCTGGGCTCTGACGTTCGGCAGAAAGTTGACATg < 1:499145/239‑1 (MQ=255)
tCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAACAAGAAGTCGCGAAACTGCGCGAATTCATCAAGAGGTCGGAAGAACGAGGCGCGGACGTCAGTAAGAAAgagtaccgg > 2:499145/1‑231 (MQ=255)
tCGAAGATAAGCCTTAAGATGAAAACGGTACGGCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTg < 1:90492/239‑1 (MQ=255)
aaGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTggg > 1:623883/1‑236 (MQ=255)
aGATGTGGCTTACGATGAAAACGGTACGCCGGTAGATATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGt < 1:278126/238‑1 (MQ=255)
gCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGAACTGGGGGCTGACGTTCGTCAGAAAATTGACCTGAAAACCTTCa > 2:455101/1‑239 (MQ=255)
gCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCCGAAACAGCAGCAAGCAGTCGCGAAACTCGGCGAATTCATCCAGCGTGCGTACGAACCGGGCGCTGCAGTTCGCCAGAAAGTTGACCCTAGTACCTTCa > 2:328404/1‑239 (MQ=255)
cTTACGATGAAAACGGTACGCCGGTAGACATCGTACGGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCAg < 1:468591/238‑1 (MQ=255)
tACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGGAACTGCGCGAATTCATCCAGCGGGCGTACGACCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTCCCGCGa > 2:530383/1‑239 (MQ=255)
tACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGCCGCGAAACTGCCCGAATTCATCCAGCGGGCGTACGAGCTGGGGGCCAGCGTTCTTCAGAAAGTTGACCTGAGAAACTTCAGCGa > 2:944480/1‑239 (MQ=255)
aCGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGCAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGGGTACCTTCAGCGAt > 1:981578/1‑239 (MQ=255)
aCGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGGGCGTCCGATCTGGGCGCTGCCGTTCGTCCGAAAATTGACCTGGGTACCCTCcgcggg > 2:948800/1‑237 (MQ=255)
cGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCCGAAAGTTGACCTGAGTACCCTACGCGAta > 2:222562/1‑238 (MQ=255)
cGATGAAAACGGTACGCCGGTAGACAACGTTCTGAACCAGCTGGGCGTACCGTTCCGTATGAACATCGGTTAGAGCCTAGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCAGCGATg < 1:122968/239‑1 (MQ=255)
aTGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCAGCGATgaa < 2:344304/239‑1 (MQ=255)
aaaaCGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGGAACAGCGGCAAGAAGTCGCGAAACTGCGCAAATTCATCCACCGGCGGAACGAGCGGGGCGCTGCGGTTCGTCGGAAAGTTGACCTCAGAACCTTCaagagagaaaaa > 2:189905/1‑228 (MQ=255)
aaaaCGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGCGAACCTTCAGCGATgaagaa > 1:903360/1‑239 (MQ=255)
aaaCGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCCGGGCGCCGACGGTCGTCAGAACGTTGACCTGAGTCACTTCAGCGATGcagaag > 1:991704/1‑239 (MQ=255)
aaaCGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGAATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGAACGATCTGGGCGCTGACGTTCGTCAGAAAGTTAACCTGAGTACCTTCAGCGATGaagaag > 1:260104/1‑239 (MQ=255)
tACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGGATCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAGCAGAAAGCCCCGAAACTGCGCGAATTCATCCAGCGGGCGTACGATCTGGGGGCTGACGTTCGTCCGCAATTTTCCCTGGGAACCCTCAGCGATGAAAAAATTAAGc > 2:261860/1‑239 (MQ=255)
ccGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCAGCGATGAAGAAGTTATGCGTCt < 2:334329/239‑1 (MQ=255)
cGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTTAGTACCTTCAGCGCTGAAGCAGTTATGctccc > 1:433392/1‑234 (MQ=255)
cGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCAGCGATGAAGAAGTTATGCGTCt < 1:672528/238‑1 (MQ=255)
tAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCAGCGATGAAGAAGTTATGCGTCtc > 1:448917/1‑235 (MQ=255)
aGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCAGCGATGAAGAAGTTATGCGTCTGGCTg < 1:597827/239‑1 (MQ=255)
cGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCAGCGATGAAGAAGTTATGCGTCTGGCTGaaaa > 1:676322/1‑237 (MQ=255)
cGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCAGCGATGAAGAAGTTATGCGTCTGGCTGaaaa > 1:400888/1‑237 (MQ=255)
cGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATATGGGCGCTGACGTTCGTCAGAAAGTTGACCTTAGTACATTCAGGGATGAAGAAGTTATGGGTCTGGCTGaaaaac > 2:479427/1‑237 (MQ=255)
cGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGACCTGGGCGCTGACGTTCGTCGGAAAGTTGACCTGAGAACCTTCAGCGATGAAGAAGTTATGGGTCGGGCTGAAAAcc > 2:751479/1‑239 (MQ=255)
cGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGACTGCGAAAGGTATCGGCG‑ACCAGATCACCGCCATGCTGAAACAGCAGCAAGAAGTCGCGGAACTGCGCGAGTTCATCCAGCAGCCGTACAGCCTGGGCGGTCACGTTCGTCAGAAAGTTGCCCTGAGTACCCTCAGCGAAAGAGAAGCACAGCGTCTGGGCGaaaaac > 2:411086/1‑237 (MQ=255)
tACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCCTGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTCCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCCGAGTACCTTCAGCGCGGACGAAGTTAAGGGTGTGGGTGAAAACATg > 2:132329/1‑239 (MQ=255)
cTGAACCAGCTGGGGGTACCGTCTCGTTTGAACATCGGTCAGAACCTCGAAACCCCCCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCAGCGATGAAGAAGTTATGCGTCTGGCTGAAAACCTgcg < 2:623883/239‑1 (MQ=255)
atGAACCAGCTGGGCGTACCGTTTCGTATGAACAGCGGTTAGGTCCTCGAAACCCACCTGGGTAAGGCTGCGAAAGGTAGCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCAGCGATGAAGAAGTTATGCGTCTGGCTGAAAACCTgcg < 2:388703/238‑1 (MQ=255)
tGAGCCAGCTGGGCGTACCGTCTCGTATAAACATCGGTAAGATCCTCGAAACCCACCTGGGGATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCGGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCAGCGATGAAGAAGTTATGCGTCTGGCTGAAAACCTgcgc < 1:651559/239‑1 (MQ=255)
aaCCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCAGCGATGAAGAAGTTATGCGTCTGGCTGAAAACCTGCGCaa > 1:691109/1‑239 (MQ=255)
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GAAACACGAGTTCGAGAAGAAACTCGAAGCGAAACGCCGCAAAATCACCCAGGGCGACGATCTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCAGCGATGAAGAAGTTATGCGTCTGGCTGAAAACCTGCGCAA > NC_000913/4184307‑4184777
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGAACTGAAACACGAGTTCGAGAAGAAACTCGAAGCGAAACGCCGCAAAATCACCCAGGGCGACGATCTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGA‑AGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCAGCGATGAAGAAGTTATGCGTCTGGCTGAAAACCTGCGCAAAGGTATGCCAATCGC > NC_000913/4184301‑4184792
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CGACCTGAAACACGAGTTCGAGAAGAAACTTGAAGCGAAACGCCGCAAAATCACCCAGGGCGACGATCTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGC < M01186:129:000000000‑A5M8V:1:2102:8280:20761/250‑1 (MQ=60)
CTGAAACACGAGTTCGAGAAGAAACTCGAAGCGAAACGCCGCAAAATCACCCAGGGCGACGATCTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTAC > M01186:129:000000000‑A5M8V:1:2108:22763:18674/1‑250 (MQ=60)
TGAAACACGAGTTCGAGAAGAAACCTGAAGCGAAACGCCGCAAAATCACCCAGGGCGACGATCTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCG < M01186:129:000000000‑A5M8V:1:2105:18826:6502/251‑1 (MQ=60)
AGAAGAAACTCGAAGGGAAACGCCGGAAAATCACCCAGGGCGACGATCTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACAT < M01186:129:000000000‑A5M8V:1:1110:26261:13176/250‑1 (MQ=60)
ATCCCCCAGGGCTACGGTCTGGCAACGGGCGTGCTTAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTAT < M01186:129:000000000‑A5M8V:1:1105:10019:27030/251‑1 (MQ=60)
CCCCAGGGCGATCATCTGGCAACGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGC < M01186:129:000000000‑A5M8V:1:1106:9114:16569/251‑1 (MQ=60)
CCCCAGGGCGACGATCTGGCCCCGGGCGTTCTGAAGATTGTTAATGTATAGCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGC < M01186:129:000000000‑A5M8V:1:2107:9349:21071/251‑1 (MQ=60)
GGGCGACGATCTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGCCAGATCCTCGAAACCCACCTGGGTAagccggcga > M01186:129:000000000‑A5M8V:1:1109:10721:3380/1‑242 (MQ=60)
ATCTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACAAGCTGGGCGTACAGTCTCGAATGAAAATCGGTCAAATCCTCGAAACCAACCTGGGTATGGCTGCGAAAGcgat > M01186:129:000000000‑A5M8V:1:2110:18060:2561/1‑246 (MQ=60)
GATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGGGTAATTTCTAAGATCAACCCGATCGAAAATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGCACTGAACCAGCAGGGCGGACCGTCCCGTATGAACATCGGTCAGATCCTCGGAACCCACCCGGGAATGACTCCGGAAGGAATCGGCG‑‑ACAAGgacaacgcactg > M01186:129:000000000‑A5M8V:1:1108:18112:12987/1‑238 (MQ=60)
TTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTAaggcgccggaagggatcggggacaaaattcacgccaacatg > M01186:129:000000000‑A5M8V:1:2109:12672:10706/1‑210 (MQ=60)
TTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGAATCGGCG‑‑ACCAGATCAACGCCATGCTA > M01186:129:000000000‑A5M8V:1:1108:18356:17279/1‑251 (MQ=60)
TTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGAATGGCTGCGAAAGGTATCGGCG‑‑ACCAGATCAACGCCCTGCTA > M01186:129:000000000‑A5M8V:1:1103:19019:10347/1‑251 (MQ=60)
TAAGGTATATCTGGCGGTTAAGCGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑‑ACAAGATCAACGCCATGCTGAAAC < M01186:129:000000000‑A5M8V:1:1105:22679:24502/251‑1 (MQ=60)
TAAGGGATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGAAAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑‑ACAAGATCAACGCCATGCTGAAAC < M01186:129:000000000‑A5M8V:1:2104:12585:17286/251‑1 (MQ=60)
GGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑‑CCACGATCAACGCCATGCTGAAACAG > M01186:129:000000000‑A5M8V:1:1110:7467:5306/1‑250 (MQ=60)
GGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑‑ACAAGATCAACGCCATGCTGAAAacga > M01186:129:000000000‑A5M8V:1:1110:7834:10587/1‑247 (MQ=60)
GGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGAATCGGCG‑‑ACACGATCAACGCCATGCTGAAACAGA > M01186:129:000000000‑A5M8V:1:1104:20664:16286/1‑251 (MQ=60)
GTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGCAAGGTATCGGCG‑‑GCAAGATCAACGCCAAGCTGAAACAGCA > M01186:129:000000000‑A5M8V:1:2104:19822:13595/1‑251 (MQ=60)
GTTAAACGCCGTATCCAGCCTGGCGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGAAATCGTACTGAACCAGCTGGGCGTACCGTCTCGTCTGAACATCGGTCAGATCCTCGAAACCCACATGGGATTGGCTGCGAAAGGTATCGCCG‑‑GCAAGATCAGCGCCATGCTTAAACAGCAGCAAGA‑AGccgg > M01186:129:000000000‑A5M8V:1:1104:17071:27471/1‑247 (MQ=60)
TATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGA‑AGTCGCGAAACTGCGCA > M01186:129:000000000‑A5M8V:1:1106:18106:18209/1‑251 (MQ=60)
ATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑‑ACAAGATAAACGCCACGCTGAAAAAGCAGGAAGA‑AGTGGCGAAACTGCGCGA > M01186:129:000000000‑A5M8V:1:2113:19975:24695/1‑251 (MQ=60)
ATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGCCAGATCCTCGAAACCCACCTGGGTATGGC > M01186:129:000000000‑A5M8V:1:2106:5342:21219/1‑182 (MQ=60)
CCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGA‑AGTCGCGAAACTGCCCGAATTCA > M01186:129:000000000‑A5M8V:1:1109:26257:14789/1‑250 (MQ=60)
ACAAGATGGCAGGTCGTCACGGTAGCAAGGGTATAATTTCGAAGATCAACCCGGTCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAACCCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGA‑AGTCGCTAAACTGCGCGAATTCATCCAGCG < M01186:129:000000000‑A5M8V:1:2105:27639:18029/250‑1 (MQ=60)
ATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGGATCGGCGCAACA‑‑ATCAACGCCATGCTGAAACAGCGGCAAGA‑AGaccccaaactcggcgcattcatcccaggagcgt > M01186:129:000000000‑A5M8V:1:2102:6675:15224/1‑217 (MQ=60)
GGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGA‑AGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGCACG > M01186:129:000000000‑A5M8V:1:2112:20742:12862/1‑251 (MQ=60)
GTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGAACGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGA‑AGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATC < M01186:129:000000000‑A5M8V:1:1106:5956:19559/249‑1 (MQ=60)
tgtccCGGTAACAAGGGTGTAAGTTCGAAGGTCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAATCCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGA‑AGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGG < M01186:129:000000000‑A5M8V:1:2106:7131:25634/246‑1 (MQ=60)
TACGGTAACCAGGGTGTAATTTCTAAGACCAACCCGATCGAAGATATGCCTTACGATTAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGA‑AGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGC < M01186:129:000000000‑A5M8V:1:1109:20812:27033/251‑1 (MQ=60)
CGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGA‑AGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGAACGACCTGGGCGCTA > M01186:129:000000000‑A5M8V:1:1112:2365:15541/1‑251 (MQ=60)
GGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGA‑AGTCGCGAAACTGCGCGAATTCATCCAGCGTCCGTACGATCTGGGCGCTGA > M01186:129:000000000‑A5M8V:1:1109:22614:9526/1‑251 (MQ=60)
GTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGA‑Aatccggaaacttccggaattcatccagcgggcgtaaggtttgggcccggag > M01186:129:000000000‑A5M8V:1:1109:19824:18584/1‑200 (MQ=60)
GGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGA‑AGTCGCGAAAATGCGCGAATTCATCAAGCGGGCGTCCGATCTGGGGGCTGACGTTGGTCA > M01186:129:000000000‑A5M8V:1:1101:15001:18980/1‑251 (MQ=60)
TTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGA‑AGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGGCAGAAAGAT > M01186:129:000000000‑A5M8V:1:2105:14316:22577/1‑251 (MQ=60)
TCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGA‑AGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCGGACGTTCGTCAGAAAGTTG > M01186:129:000000000‑A5M8V:1:2114:19934:9040/1‑250 (MQ=60)
CAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGA‑AGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGGGT > M01186:129:000000000‑A5M8V:1:2103:21650:10393/1‑250 (MQ=60)
TTCGAAGATATGCCTTACGATGAAAACGGTTCGCCGGTAAACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGA‑AGTCGCGAAACTGCGCGAATTCATCCAGCGGGCGTACGATCTGGGCTCTGACGTTCGGCAGAAAGTTGACATGAGTACCTTCAG < M01186:129:000000000‑A5M8V:1:1113:10676:20234/251‑1 (MQ=60)
ATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑‑ACAAGATCAACGCCATGATGAAACAGCAGCAAGA‑AGTCGCGAACCTGCGCGAATTCATCAAGCGTGCGTACGACCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCA > M01186:129:000000000‑A5M8V:1:1109:14293:23848/1‑250 (MQ=60)
ATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGCATGGCTGCGAAAGGTATCGGCG‑‑ACACGATCAACGCCATGCTGAAACAGCAG‑AAGACAGTCGCGAAACTGCGCGAATTCACCCAGCGGGCGTACGATCAGGGCGCTGACGTTCGCCAGAAAGTTAGCCTGCGTACCTTCAG > M01186:129:000000000‑A5M8V:1:1114:4439:13420/1‑251 (MQ=60)
ATCGAAGATAAGCCTTAAGATGAAAACGGTACGGCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGA‑AGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCAG < M01186:129:000000000‑A5M8V:1:1103:9422:10165/251‑1 (MQ=60)
gagatgtggCTTACGATGAAAACGGTACGCCGGTAGATATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGA‑AGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCAGCGA < M01186:129:000000000‑A5M8V:1:1107:16869:23065/241‑1 (MQ=60)
AGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGA‑AGTCGCGCAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGGGTACCTTCAGCGATG > M01186:129:000000000‑A5M8V:1:2111:20516:25599/1‑251 (MQ=60)
GCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑‑CCAAGATCAACGCCATGCTGAAACAGCAGCAAGA‑AGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGAGCCGACGTTCGTCAGAAAGTTGACCTGAGTACCTTTAGCGATCAAGAAG > M01186:129:000000000‑A5M8V:1:1102:4785:18384/1‑251 (MQ=60)
GCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGA‑AGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGCGAACCTTCAGCGATGAAGAAG > M01186:129:000000000‑A5M8V:1:2110:20320:3401/1‑251 (MQ=60)
CCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGA‑AGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCCGGGCGCCGACGGTCGTCAGAACGTTGACCTGAGTCACTTCAGCGATGCAGAAGT > M01186:129:000000000‑A5M8V:1:2112:23856:8955/1‑251 (MQ=60)
CCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGAATGGCTGCGAAAGGTATCGGCG‑‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGA‑AGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGAACGATCTGGGCGCTGACGTTCGTCAGAAAGTTAACCTGAGTACCTTCAGCGATGAAGAAGT > M01186:129:000000000‑A5M8V:1:1107:28797:13152/1‑251 (MQ=60)
CCTTACGATGAAAACGGTACGCCGGTAGACATCGTACGGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGA‑AGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCAGCGATGAAGAAG < M01186:129:000000000‑A5M8V:1:1112:11943:20795/250‑1 (MQ=60)
TCGATGAAAACGGTACGCCGGTAGACAACGTTCTGAACCAGCTGGGCGTACCGTTCCGTATGAACATCGGTTAGAGCCTAGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGA‑AGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCAGCGATGAAGAAGTTATG < M01186:129:000000000‑A5M8V:1:1104:8119:5020/251‑1 (MQ=60)
AGACGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGA‑AGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTTAGTACCTTCAGCGCTGAAGCAGTTATGCtcccg > M01186:129:000000000‑A5M8V:1:1111:28274:20652/1‑245 (MQ=60)
CGGTACGCCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGA‑AGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCAGCGATGAAGAAGTTATGCGTCTCG > M01186:129:000000000‑A5M8V:1:1112:25739:8892/1‑248 (MQ=60)
CCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGA‑AGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCAGCGATGAAGAAGTTATGCGTCTGGCTGAAAACC < M01186:129:000000000‑A5M8V:1:2104:13085:15048/250‑1 (MQ=60)
CCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGA‑AGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCAGCGATGAAGAAGTTATGCGTCTGGCTGAAAAC > M01186:129:000000000‑A5M8V:1:2104:14448:16980/1‑249 (MQ=60)
CCGGTAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGA‑AGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCAGCGATGAAGAAGTTATGCGTCTGGCTGAAAAC > M01186:129:000000000‑A5M8V:1:1110:13210:24188/1‑249 (MQ=60)
TAGACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGA‑AGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCAGCGATGAAGAAGTTATGCGTCTGGCTGAAAACCTGCGC < M01186:129:000000000‑A5M8V:1:2102:17968:17118/251‑1 (MQ=60)
ACATCGTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGA‑AGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCAGCGATGAAGAAGTTATGCGTCTGGCTGAAAACCTGCGCAAA > M01186:129:000000000‑A5M8V:1:2104:17710:25820/1‑251 (MQ=60)
GTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGA‑AGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCAGCGATGAAGAAGTTATGCTCCTGGCTGAAAACCTGCGCAAAGGaaa > M01186:129:000000000‑A5M8V:1:2114:10910:15770/1‑248 (MQ=60)
GTACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGA‑AGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCAGCGATGAAGAAGTAATGCGTCTGGCTAAAAACCTGCGAAAAGGaag > M01186:129:000000000‑A5M8V:1:2111:5647:13412/1‑248 (MQ=60)
TACTGAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGA‑AGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTACGAAAGTTGACCTGAGTACCTTCAGCGATGAAACAGTTATGCGCCTGGCTAAAAACttccgcaacgggat > M01186:129:000000000‑A5M8V:1:2107:26043:10803/1‑236 (MQ=60)
CTGAGCCAGCTGGGCGTACCGTCTCGTATAAACATCGGTAAGATCCTCGAAACCCACCTGGGGATGGCTGCGAAAGGTATCGGCG‑‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGA‑AGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCGGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCAGCGATGAAGAAGTTATGCGTCTGGCTGAAAACCTGCGCAAAGGTATGCC < M01186:129:000000000‑A5M8V:1:2103:12455:26991/251‑1 (MQ=60)
GAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGA‑AGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCAGCGATGAAGAAGTTATGCGTCTGGCTGAAAACCTGCGCAAAGGTATGCCAA > M01186:129:000000000‑A5M8V:1:2110:16618:19400/1‑251 (MQ=60)
GAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGA‑AGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCAGCGATGAAGAAGTTATGCGTCTGGCTGAAAACCTCAGCAAAGGTATGCCtt > M01186:129:000000000‑A5M8V:1:1110:3227:17106/1‑249 (MQ=60)
GAACCAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGCGATCGGCG‑‑ACAAGCACACCGCCATGCTGAAACAGCAGCAAGA‑AGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGcctctcacgtccgccagacatctgacctggacaccttcagggaggaggaagttatgagtctggctgaaaacttgccaaaaggactccaca > M01186:129:000000000‑A5M8V:1:1111:15723:4210/1‑161 (MQ=60)
CAGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGA‑AGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCAGCGATGAAGAAGTTATGCGTCTGGCTGAAACGCTACGCAAAGGGATGCCAATCGA > M01186:129:000000000‑A5M8V:1:1106:12697:26207/1‑251 (MQ=60)
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CGAACTGAAACACGAGTTCGAGAAGAAACTCGAAGCGAAACGCCGCAAAATCACCCAGGGCGACGATCTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCG‑‑ACAAGATCAACGCCATGCTGAAACAGCAGCAAGA‑AGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCAGCGATGAAGAAGTTATGCGTCTGGCTGAAAACCTGCGCAAAGGTATGCCAATCGC > NC_000913/4184301‑4184792
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
