Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A7 F28 I0 R1 91 172.1 3477528 97.2% 3380157 226.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 2,828,506 T→G 12.3% V257G (GTG→GGG)  srlD → sorbitol‑6‑phosphate dehydrogenase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,828,5060TG12.3% 352.1 / 9.0 138V257G (GTG→GGG) srlDsorbitol‑6‑phosphate dehydrogenase
Reads supporting (aligned to +/- strand):  ref base T (39/79);  new base G (17/2);  total (57/81)
Fisher's exact test for biased strand distribution p-value = 3.81e-06
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01

Only 100 of 139 total aligned reads displayed.

CGGTGCATTCACTGATGCTCGGTAACCTGCTGAAATCGCCGATGTTCCAGTCACTGTTGCCACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAACTGGCCTTAGGCGGCTGGCAAATTTCTCG‑TTTTAACCGTGCCTTCGACACACTATGCCAGCAAGGGCGGG  >  NC_000913/2828269‑2828738
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                         
cGGTGCATTCACTGATGCTCGGTAACCTGCTGAAATCGCCGATGTTCCAGTCACTGTTGCCACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTg                                                                                                                                                                                                                                          <  1:102992/239‑1 (MQ=255)
cGGTGCATTCACTGATGCTCGGTAACCTGCTGAAATCGCCGATGTTCCAGTCACTGTTGCCACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTg                                                                                                                                                                                                                                          >  2:576847/1‑239 (MQ=255)
cGGTGCATTCACTGATGCTCGGTAACCTGCTGAAATCGCCGATGTTCCAGTCACTGTTGCCACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTg                                                                                                                                                                                                                                          <  1:1396938/239‑1 (MQ=255)
cGGTGCATTCACTGATGCTCGGTAACCTGCTGAAATCGCCGATGTTCCAGTCACTGTTGCCACAATACGCGACCAAGCTGGGTATCAAAACGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGA‑TATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCTGGTGa                                                                                                                                                                                                                                         >  1:1566435/1‑239 (MQ=255)
     cATTCACTGATGCTCGGTAACCTGCTGAAATCGCCGATGTTCCAGTCACTGTTGCCACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGtt                                                                                                                                                                                                                                     >  1:1402942/1‑239 (MQ=255)
     cATTCACTGATGCTCGGTAACCTGCTGAAATCGCCGATGTTCCAGTCACTGTTGCCACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGGGATGtt                                                                                                                                                                                                                                     >  1:1648851/1‑239 (MQ=255)
               tGCTCGGTAACCTGCTGAAATCGCCGATGTTCCAGTCACTGTTGCCACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATc                                                                                                                                                                                                                               >  1:1034795/1‑235 (MQ=255)
               tGCTCGGTAACCTGCTGAAATCGCCGATGTTCCAGTCACTGTTGCCACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACa                                                                                                                                                                                                                           >  1:1535957/1‑239 (MQ=255)
               tGCTCGGTAACCTGCTGAAATCGCCGATGTTCCAGTCACTGTTGCCACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGGGTTGTTCTTATCaaa                                                                                                                                                                                                                            >  2:1003803/1‑237 (MQ=255)
                  tCGGTAACCTGCTGAAATCGCCGATGTTCCAGTCACTGTTGCCACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCg                                                                                                                                                                                                                        <  1:1447699/239‑1 (MQ=255)
                    ggTAACCTGCTGAAATCGCCGATGTTCCAGTCACTGTTGCCACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGgtggtg                                                                                                                                                                                                                                       >  2:1401268/1‑222 (MQ=255)
                    ggTAACCTGCTGAAATCGCCGATGTTCCAGTCACTGTTGCCACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGga                                                                                                                                                                                                                      >  2:518888/1‑239 (MQ=255)
                      tAACCTGCTGAAATCGCCGATGTTCCAGTCACTGTTGCCACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGgag                                                                                                                                                                                                                     <  2:313098/238‑1 (MQ=255)
                      tAACCTGCTGAAATCGCCGATGTTCCAGTCACTGTTGCCACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGgag                                                                                                                                                                                                                     <  2:1487821/238‑1 (MQ=255)
                       aaCCTGCTGAAATCGCCGATGTTCCAGTCACTGTTGCCACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGgaga                                                                                                                                                                                                                    <  1:328429/238‑1 (MQ=255)
                       aaCCTGCTGAAATCGCCGATGTTCCAGTCACTGTTGCCACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGgaga                                                                                                                                                                                                                    <  2:876047/238‑1 (MQ=255)
                       aaCCTGCTGAAATCGCCGATGTTCCAGTCACTGTTGCCACAATACGCGACCAAGCTGGGCATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGgaga                                                                                                                                                                                                                    <  2:1484038/238‑1 (MQ=255)
                           tgctgAAATCGCCGAAGTTCCAGTCACTGTTGCCCCAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTGCGGTGATGTTCTGGTCAACCGCAGAGATACAt                                                                                                                                                                                                               >  1:831386/1‑239 (MQ=255)
                                       cGATGTTCCAGTCACTGTTGCCACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATCAAA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGATACATTAAGGATCTcc                                                                                                                                                                                                    >  1:1599419/1‑239 (MQ=255)
                                       cGATGTTCCAGTCACTGTTGCCACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCg                                                                                                                                                                                                   <  2:955074/239‑1 (MQ=255)
                                       cGATGTTCCAGTCACTGTTGCCACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCg                                                                                                                                                                                                   <  1:703425/239‑1 (MQ=255)
                                          tGTTCCAGTCACTGTTGCCACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGgag                                                                                                                                                                                                                     <  1:758820/218‑1 (MQ=255)
                                          tGTTCCAGTCACTGTTGCCACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTg                                                                                                                                                                                                 <  2:1546614/238‑1 (MQ=255)
                                          tGTTCCAGTCACTGTTGCCACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTg                                                                                                                                                                                                 <  1:113738/238‑1 (MQ=255)
                                          tGTTCCAGGCCCTGTTGCCACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTg                                                                                                                                                                                                 <  2:1187367/238‑1 (MQ=255)
                                                   cACTGTTGCCACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGa                                                                                                                                                                                       <  2:839332/239‑1 (MQ=255)
                                                          gCCACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTg                                                                                                                                                                                <  1:198029/239‑1 (MQ=255)
                                                           ccACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTg                                                                                                                                                                                <  2:1535957/238‑1 (MQ=255)
                                                                 tatgcgACCAAGCTGTGTATAAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTAGC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGgaga                                                                                                                                                                                                                    <  1:369773/193‑1 (MQ=255)
                                                                    gcgACCGAGCGGGCTATCAAACCGGATCAAGTCTAGCAGTATTACCTCGGCAAAGTCCCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTTCTGCACCGGAAAGTCGAGTAATGTCACAGGC‑GGTCAGGTGATGTTCTCATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACg                                                                                                                                                                      <  2:1180533/239‑1 (MQ=255)
                                                                         cAAGCTGGGTATCAAACCGGATCAAGTCGGACAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCtcat                                                                                                                                                                 <  1:946905/239‑1 (MQ=255)
                                                                         cAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGGGATGTTCTGATCAACCGCGGGGATCCCTTCAGGAAATCCGCGAGGCTATAGAATGCCTGGTGCGCTACGCtcc                                                                                                                                                                  >  2:1640197/1‑237 (MQ=255)
                                                                          aaGCTGGGTATCAAACCTGATCAAGTCGAGCAGTATTACATCGACAAAGTGCCGCTCAAACGTGCCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATTTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCtcatc                                                                                                                                                                <  2:1525422/239‑1 (MQ=255)
                                                                           aGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGACAGGAGATGTTCTGATCAACAGCGGGGATCCATTAATGATCTCCGTGGGACTATAGAATGCATGATGCGCTACGCtcatca                                                                                                                                                               >  2:369829/1‑239 (MQ=255)
                                                                              tGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAg                                                                                                                                                              <  1:518888/237‑1 (MQ=255)
                                                                              tGGGTATAAAACCGGATCAAGTCGAGCAGTATTAAATCGACAAAGTACCGCTCAAACGCGGCTGCGATTAGC‑AA‑GATGTGCTGAATATGCTGCTGGTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGATCCAGTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAg                                                                                                                                                              <  2:1177144/237‑1 (MQ=255)
                                                                                       aaCCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGGGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAgg                                                                                                                                                     >  1:1654843/1‑237 (MQ=255)
                                                                                        cccGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCGGCGATTATC‑AA‑GATGTTCTGAATATGCTGCTGTTCTGCGCCAGTCCTAAGGCGTCGTACTGCCCCGGACAGTCGATCAATTTCCCCGGC‑GGTCAGGTGATTTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGCCt                                                                                                                                                  <  2:816589/238‑1 (MQ=255)
                                                                                               cAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGTATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCa                                                                                                                                           <  2:1402942/239‑1 (MQ=255)
                                                                                                aaGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCAc                                                                                                                                          <  1:1600814/239‑1 (MQ=255)
                                                                                                      aGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTTTGATCAACAGCGGAGATc                                                                                                                                                                                                                  >  1:784991/1‑161 (MQ=255)
                                                                                                      aGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGATc                                                                                                                                                                                                                  <  2:784991/161‑1 (MQ=255)
                                                                                                           tATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGCTCAACAGCGGGGATCCCTTAAGGGTCTCCGTGAGAACATAGAATGCCCGGTGCGCGACGCTCATGCGGCATACAGGAGTTCCGCCCCTACCTTAAggg                                                                                                                               >  2:1510198/1‑238 (MQ=255)
                                                                                                           tATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCtcatc                                                                                                                                                                <  1:1672339/206‑1 (MQ=255)
                                                                                                            aTTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTAAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAgg                                                                                                                                <  1:954699/237‑1 (MQ=255)
                                                                                                            aTTACATCAACAAAGTACCGCTCAACCGCGGCTGGGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCTCCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGTTGCGCTACGCTCATCGGCCATACAGGATTTCCGCCACTACATTAAGGaa                                                                                                                              <  1:369829/239‑1 (MQ=255)
                                                                                                                cATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGt                                                                                                                          >  1:632309/1‑239 (MQ=255)
                                                                                                                   cGACAAAGTACCGCTAAAACGCGGCGGCGATTACC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGAAAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCGCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTAt                                                                                                                       <  2:1425037/239‑1 (MQ=255)
                                                                                                                     aCAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGGTGTTCTGATCAACAGCGGGGATCCATTAAGGATCTCCCTGGGGCCATAGAATGCCTGATGCGCCAAGCTCATCAGGCATACAGGACTTCCGCCACCAACTTAAGGGAAAGTTATgg                                                                                                                     >  2:495963/1‑239 (MQ=255)
                                                                                                                     aCAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATTTTCTGATCAACAGCGgag                                                                                                                                                                                                                     >  1:1666464/1‑143 (MQ=255)
                                                                                                                     aCAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGgag                                                                                                                                                                                                                     <  2:1666464/143‑1 (MQ=255)
                                                                                                                     aCAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGATCCCTTAAGGATCTCCCTGAGACTATAGAATGCCTGATGCGCTACGCTCATCCGGCATACCGGGATTCCGCCACCACATTTAGGGAAAGTTATgg                                                                                                                     >  1:1411477/1‑239 (MQ=255)
                                                                                                                     aCAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGAt                                                                                                                                                                                                        <  2:239726/156‑1 (MQ=255)
                                                                                                                     aCAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGAt                                                                                                                                                                                                        >  1:239726/1‑156 (MQ=255)
                                                                                                                     aCAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGGCTATAGAATGCCTGATGCGGCACGCTCATCAGGCATACAGGACTTCCGCCACCACATTAAGGAAAAGATTTgg                                                                                                                     >  2:1122253/1‑239 (MQ=255)
                                                                                                                     aCAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTTCGCCACTACATTAAGGAAAAGTTATgg                                                                                                                     >  1:1216774/1‑239 (MQ=255)
                                                                                                                     aCAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGaa                                                                                                                              <  2:484215/230‑1 (MQ=255)
                                                                                                                     aCAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGGGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGaa                                                                                                                              >  1:484215/1‑230 (MQ=255)
                                                                                                                      cAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGaa                                                                                                                              <  1:982481/229‑1 (MQ=255)
                                                                                                                      cAAACTCCCGCTCAAACGCGTCTGATATTATC‑AA‑GTTGTGCGGAATTTGTTGCTGTTTTACGCCCGTCTTAGGGCGTCGTACTGCCCCGGAAAGTCGATCAATGTCCCCGGC‑GTTCAGGTGATGTTCTGATCAACAGCGGAGTACCATTAAGGTTCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCGGGCATCCAGGACTTCCGCCACTACATTAAGGAAAAGTTAt                                                                                                                       <  2:1156101/236‑1 (MQ=255)
                                                                                                                         aggaccgagcAAAGGCGGCTGCGATTATA‑AAGGATGTGATGATTATGCTGCTGTTCTACGCCAGTCTAAAGGCGTCGTACTGCACCGGACAGCCGATAAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGACCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGATACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTAt                                                                                                                  <  2:1599419/230‑1 (MQ=255)
                                                                                                                                cTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGGGGTGATCTGGTCAACAACGGACATCCACTAAGGGACTCCGTGAGACCATAGAATGCCTGATGGGGCACGCTCATTAACAATCAAGGACTTCCGCCAATAACTTAAGGAAAAGTTATTGTATCCGCaac                                                                                                           >  2:1100173/1‑236 (MQ=255)
                                                                                                                                    aaCGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACtcatca                                                                                                      <  1:1003803/239‑1 (MQ=255)
                                                                                                                                     aCGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTACGGAAAAGTTATTGTATCCGCACtcctca                                                                                                      >  1:887928/1‑238 (MQ=255)
                                                                                                                                      cgcgGCTGCGATAAGA‑AA‑GATGTGCAGAAGATGCGGCTGTTCGCCGCCCGGTCTAAGGCGGCGTACTGCACCCGGCAGCAAATCAATGTCCCGGGC‑GGTCAGGTGATGTTCTAATCAACGGCGGAGAGCCATTAAGGATCTAGGAGAGACTAGAGAATGCCGAATGCGCAACGCGCACAAGGCATCCAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCAcc                                                                                                    <  2:831386/239‑1 (MQ=255)
                                                                                                                                             gCGATTATC‑AA‑GAGGTGCTAAATATGGTGAGGTTCCACCCCAGTCCTAAGGGGTGGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGGCAGGTGATGTTCTGAACAACAGCGGGGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCg                                                                                             <  2:1446905/239‑1 (MQ=255)
                                                                                                                                                aTTATC‑AA‑GATGTGCTGAATAGGTTTGTGTTATACGCCGGTCGTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGtt                                                                                           <  2:1531209/238‑1 (MQ=255)
                                                                                                                                                aTTATC‑AA‑GATGTGCGGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGGTGTACTGCACCGGACAGTCGATCAATGGCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGtt                                                                                           <  2:956615/238‑1 (MQ=255)
                                                                                                                                                   aTC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATc                                                                                        >  1:1359520/1‑238 (MQ=255)
                                                                                                                                                              ggCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCg                                                                                                               <  1:1099233/205‑1 (MQ=255)
                                                                                                                                                               gCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGGGGTGGTCTGATCAACAGCGGAGATTCATTAAGGATCTCCGTGAGACTATAGAAAGCCTGATGCGCTACGCTCATCAGGCGTACAGGGCTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCTTCACCGTCCCCGTTTTCTCCTGGGGTgc                                                                             >  1:473756/1‑239 (MQ=255)
                                                                                                                                                                cTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCCGAGATCCATTAAGGATCTCCGTGAGACTATAAAATGCCTGCTGCGCTACGCCCATCAGGCATACAGGAAGTCCGCCACTCCATTTAGGAAAAAGTATGGTATCCCCACTCATCACCCTCACCCTAATCACCCggggggc                                                                             >  2:1551851/1‑233 (MQ=255)
                                                                                                                                                                    atatGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAAc                                                                        <  1:1292827/239‑1 (MQ=255)
                                                                                                                                                                    aaatGCTGCTGTTCTACGCCGGTCCTAAGGCGTCGTCCGGCCCCGGACAGGCGATCAAGGTCACCGGC‑GGTCAGGTGATGTTCTGAACAACAGCGGAGATCCATAAAGAATCTCGGTGAGACTAAAAAATGCCTGATGCGCTACGCTCACCGGGCATCCAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAAc                                                                        <  2:217027/237‑1 (MQ=255)
                                                                                                                                                                        gctgctGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCtcatc                                                                                                                                                                <  1:110563/147‑1 (MQ=255)
                                                                                                                                                                        gctgctGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCtcatc                                                                                                                                                                >  2:110563/1‑147 (MQ=255)
                                                                                                                                                                           gttgTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTAAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAACTGGCCtt                                                                 <  1:1619093/237‑1 (MQ=255)
                                                                                                                                                                           gctgTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGGGATGTTCTTATTAACAGCAGAGAGCCATTAAGGATCTCCCTGAGACTATAAAATGCCTGGAGCGGTCAGCTCCTCATGCAGACAGGGCTTCCGCCTCTACATTAAGGAAAAGTTATTGTATTCGCACCCATCAACCTCGCCGCTATCGCCCGGTCTCCGCAACTGGccgt                                                                 >  1:294905/1‑237 (MQ=255)
                                                                                                                                                                                 cgccgccgtgccTAAGGGGTCGTCCTGCACCGGACAGTCAATCAATGTCCCGGGG‑GTTCGGGTGAGGTTCTGACCAACAGCGGAGATCCATTAAGGATCGCGGGGAGGTTAAAGATTGCGTGATGCGCTACGTACATTAGGCATACAGGCCTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAACTGGCCTTAggcgg                                                           <  2:473756/229‑1 (MQ=255)
                                                                                                                                                                                         gTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATTTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGGGGGCGCAACTGGCCTTAGGCGGCTGGCaaa                                                   >  1:50882/1‑239 (MQ=255)
                                                                                                                                                                                            cTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCCCCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAACTGGCCTTAGGCGGCTGGCAAAttt                                                <  1:1122253/239‑1 (MQ=255)
                                                                                                                                                                                                    tcgtACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGGTCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCCGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAACTAGCCTTAGGCGGCTGGCAAATTTCTCG‑tttt                                       >  1:738445/1‑239 (MQ=255)
                                                                                                                                                                                                           gCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTTTGATAAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACCTTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCCCCTGGGGTGCGCCACTGGCCTTTGGCGGCTTGCCAATTTTTCC‑TTTTTACCGt                                 >  1:1256520/1‑238 (MQ=255)
                                                                                                                                                                                                           gCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGGGATGTTCTGATCAACAGCGGGGATCCATTAAGGATCTCCGGGAGACTATAGAATGCCTGATGCGCCACGCTCATCAGGCATACAGGACTTCCGCCACTACCTTTAGGGAAAGTTATGGTATCCGCACTCATCACCGTCCCCGGTATCGCCTGGGGTGGGCAACTGGCCCTAGGCGGCTGGCAAATTTTTCGTTTTTAACCg                                  >  2:734539/1‑238 (MQ=255)
                                                                                                                                                                                                             aCCGGACAGTCGCTAAATG‑CCCCGGCGGGTAGGGTGATTTTCTGATCAACGGGGGAGTCCCATTAAGAATCTCGGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAACTGGCCTTAGGCGGCTGGCAAATTTCTCG‑TTTTAACCGTGcc                              <  2:1654843/239‑1 (MQ=255)
                                                                                                                                                                                                             aCCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAACTGGCCTTAGGCGGCTGGCAAATTTCTCG‑TTTTAACCGTGc                               <  1:576847/238‑1 (MQ=255)
                                                                                                                                                                                                               cGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGGGATCCATTAAGGATCTCCGGGGGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATTGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCCACTGGCCTTAGGCCGCTGGCAAATTTCTCG‑TTTTTACCGTGCCt                             >  2:1709136/1‑238 (MQ=255)
                                                                                                                                                                                                               cGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGGGTGCGCAACTGGCCTTAGGCGGCTGGCAAATTTCTCG‑TTTTAACCGTGCCtt                            >  1:589844/1‑239 (MQ=255)
                                                                                                                                                                                                                 gACAGTCGATCAATGTCACCGGC‑GGTCAGGTGTTGTTCTTATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCCCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAACTGGCCTTAGGCGGCTGGCAAATTTCTCG‑TTTTAACCGTGCCTTCg                          >  1:1160762/1‑239 (MQ=255)
                                                                                                                                                                                                                 gACAGTCGATCAATGTCACCGGC‑GGTCAGGTGGTGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAACTGGCCTTAGGCGGCTGGCAAATTTCTCG‑TTTTAACCGTGCCTTCg                          >  1:300572/1‑239 (MQ=255)
                                                                                                                                                                                                                 gACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGGTCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCCCATCAGGCCTACAAGACTTCCGCCCCTACCTTAAAGAAAAGTTATGGTATCCGCCCTCATCACCCTCCCCCTTATCCCCTGGTATGCGCAACTGGCCCTAGGGGGCCGGCAAATTTCTCG‑TTTTAACCGTGCCTTc                           >  2:1596753/1‑238 (MQ=255)
                                                                                                                                                                                                                      agcaTCAATGTCACCGGC‑GGTAGGGGGATTTTCGAATCAACAGCGGAGATCAATTAAGGATCTCCTGAAGACTATAGAATCCCTGATGCGCTACGCACAACAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAACTGGCCTTAGGCGGCTGGCAAATTTCTCG‑TTTTAACCGTGCCTTCGacac                      <  1:1551851/235‑1 (MQ=255)
                                                                                                                                                                                                                       cGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAACTGGCCTTAGGCGGCTGGCAAATTTCTCG‑TTTTAACCGTGCCTTCGacaca                     <  1:1413972/238‑1 (MQ=255)
                                                                                                                                                                                                                       cGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAACTGGCCTTAGGCGGCTGGCAAATTTCTCG‑TTTTAACCGTGCCTTCGacaca                     <  1:1709136/238‑1 (MQ=255)
                                                                                                                                                                                                                       cGAACAATGGCACCGGC‑GGTCAGGTGATGTTCGGATCAGCGGCGGCAATCCATTAAGGATCTCCGTGAAACTATAGAAGGCCTGATGCGCTACGCTCAGCAGGCATACAGGCCTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAACTGGCCTTAGGCGGCTGGCAAATTTCTCG‑TTTTAACCGTGCCTTCGa                         <  2:740680/234‑1 (MQ=255)
                                                                                                                                                                                                                              tGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACg                                                                                                                                                                      >  1:825412/1‑87 (MQ=255)
                                                                                                                                                                                                                                 cACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGAGGCGCTACGCTCATCAGGAATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAACTGGCCTTAGGCGGCTGGCAAATTTCTCG‑TTTTAACCGTGCCTTCGACACACTATGCCAGc           <  1:1510198/238‑1 (MQ=255)
                                                                                                                                                                                                                                    cggc‑ggTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAACTGGCCTTAGGCGGCTGGCAAATTTCTCG‑TTTTAACCGTGCCTTCGACACACTATGCCAGCAAgg       <  2:632309/239‑1 (MQ=255)
                                                                                                                                                                                                                                    cggc‑ggGCAGGGGATGTTCTGATCAACAGCGGAGATCAATAAAGGATCTCCGTGAGACTATAGAATGCCTGAGGCGCTACGCCCACCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAACTGGCCTTAGGCGGCTGGCAAATTTCTCG‑TTTTAACCGTGCCTTCGACACACTATGCCAGCAAgg       <  2:1359520/239‑1 (MQ=255)
                                                                                                                                                                                                                                           tcgggTTATGTTCTTATCAACGGCGGAAATCCAATAAGGGTCTCCGTGAGACTATAGAATGCCTGATGCCCTCCGCTCAACAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAACTGGCCTTAGGCGGCTGGCAAATTTCTCG‑TTTTAACCGTGCCTTCGACACACTATGCCAGCAAGGGCggg  <  2:1160762/235‑1 (MQ=255)
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                         
CGGTGCATTCACTGATGCTCGGTAACCTGCTGAAATCGCCGATGTTCCAGTCACTGTTGCCACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATC‑AA‑GATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGC‑GGTCAGGTGATGTTCTGATCAACAGCGGAGATCCATTAAGGATCTCCGTGAGACTATAGAATGCCTGATGCGCTACGCTCATCAGGCATACAGGACTTCCGCCACTACATTAAGGAAAAGTTATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAACTGGCCTTAGGCGGCTGGCAAATTTCTCG‑TTTTAACCGTGCCTTCGACACACTATGCCAGCAAGGGCGGG  >  NC_000913/2828269‑2828738

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A