Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1696 |
279.3 |
15874187 |
97.8% |
15524954 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,855,431 |
A→G |
D121D (GAT→GAC) |
b1773 ← |
putative aldolase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,855,431 | 0 | A | G | 99.1%
| 698.1
/ ‑4.8
| 226 | D121D (GAT→GAC) | b1773 | putative aldolase |
| Reads supporting (aligned to +/- strand): ref base A (0/2); new base G (86/138); total (86/140) |
| Fisher's exact test for biased strand distribution p-value = 5.26e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 231 total aligned reads displayed.
GTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCATACCATGAGTCCAGG > NC_000913/1855341‑1855519
|
tGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCg > 1:2652186/1‑93 (MQ=255)
gATAGCCCGCCAGCGCTTCCTCAGAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGa < 1:5622343/93‑1 (MQ=255)
aTAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGAc < 1:1173100/93‑1 (MQ=255)
aTAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGAc < 2:4016390/93‑1 (MQ=255)
tAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAGAAAGTCGAcc > 1:2740380/1‑92 (MQ=255)
gCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATGCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGc < 1:6857272/93‑1 (MQ=255)
gCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGc > 2:6427639/1‑93 (MQ=255)
ccGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCct > 1:2176894/1‑93 (MQ=255)
ccGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCct < 1:4782446/93‑1 (MQ=255)
cGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCctc < 2:5765614/93‑1 (MQ=255)
cGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCctc > 1:1046448/1‑93 (MQ=255)
cGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCctc > 2:4431495/1‑93 (MQ=255)
cGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCctc < 1:3944168/93‑1 (MQ=255)
cGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCctc < 2:797162/93‑1 (MQ=255)
gCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCctct < 1:3196822/93‑1 (MQ=255)
cAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCttt < 1:3250591/93‑1 (MQ=255)
cAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCttt < 1:5910928/93‑1 (MQ=255)
aGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTg > 2:4486047/1‑93 (MQ=255)
aGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTg < 2:2389804/93‑1 (MQ=255)
aGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTg > 2:5572124/1‑93 (MQ=255)
aGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTg > 2:2158416/1‑93 (MQ=255)
cTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTa < 1:6733329/93‑1 (MQ=255)
ttCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTaa < 1:7395175/93‑1 (MQ=255)
ttCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTaa > 1:2285964/1‑93 (MQ=255)
ttCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTaa < 2:6328556/93‑1 (MQ=255)
ccTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAAc < 1:4242879/93‑1 (MQ=255)
cataaTAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAAc < 2:2010268/89‑1 (MQ=255)
cTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACg > 1:6363717/1‑93 (MQ=255)
tCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGa > 1:95938/1‑93 (MQ=255)
tCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGa < 2:2934544/93‑1 (MQ=255)
aTAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAat > 1:3004851/1‑93 (MQ=255)
tAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAata < 2:876773/93‑1 (MQ=255)
tAAACGGTTTCATTACCAACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAata < 2:3117923/93‑1 (MQ=255)
aaaCGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAatat < 2:3285155/93‑1 (MQ=255)
aaaCGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAatat < 2:6682844/93‑1 (MQ=255)
aaCGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATAtt > 1:7497419/1‑93 (MQ=255)
aaCGGTTCGATTACCGGCATGCCCTAACTCCGCGTCTACCGGAAGACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATAtt < 1:266013/93‑1 (MQ=255)
cGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATAtttt < 1:4603040/93‑1 (MQ=255)
gggttCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTttc < 1:5156597/90‑1 (MQ=255)
ggTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTttc < 2:1213124/93‑1 (MQ=255)
gTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTttct > 1:1881914/1‑93 (MQ=255)
tttCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTttctt < 1:7571660/93‑1 (MQ=255)
ttCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTttcttc < 1:7756113/93‑1 (MQ=255)
ttCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTttcttc < 1:4949307/93‑1 (MQ=255)
ttCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTttcttc < 1:1476176/93‑1 (MQ=255)
cATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGa > 1:3343929/1‑93 (MQ=255)
aTTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGaa > 2:7171620/1‑93 (MQ=255)
tACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAAt > 2:5715982/1‑93 (MQ=255)
ccGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCa < 2:6215872/93‑1 (MQ=255)
ccGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCa > 2:7537330/1‑93 (MQ=255)
gACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCaaa > 2:4551404/1‑93 (MQ=255)
gACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCaaa < 2:1112502/93‑1 (MQ=255)
gACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCaaa > 1:3471951/1‑93 (MQ=255)
ccctGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAAc < 2:6031687/90‑1 (MQ=255)
aCATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAAc < 2:3673919/93‑1 (MQ=255)
aCATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAAc < 1:6551576/93‑1 (MQ=255)
aTGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAAcgc > 2:904777/1‑93 (MQ=255)
aTGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAAcgc > 2:2697527/1‑93 (MQ=255)
ccccTAATTCCGCCTCTACCGGAATCCCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCgg < 2:2856677/92‑1 (MQ=255)
cccTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGa < 2:6168798/93‑1 (MQ=255)
cccTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGa > 1:6160318/1‑93 (MQ=255)
ccTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGaa < 1:7290921/93‑1 (MQ=255)
cTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAg > 1:6182502/1‑93 (MQ=255)
aTTCCGCCTCTACCGGAATAACCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACACGCAAGCAt > 2:5505898/1‑93 (MQ=255)
ttCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATc > 1:3134709/1‑93 (MQ=255)
tCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCa < 1:3453551/93‑1 (MQ=255)
ctACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTa > 2:1649067/1‑93 (MQ=255)
ctACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTa > 2:7759192/1‑93 (MQ=255)
ctACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTa > 2:4239227/1‑93 (MQ=255)
ctACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTa > 2:5059832/1‑93 (MQ=255)
tACCGGAATACCCAGCGGATGGTAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTaa > 2:7493244/1‑93 (MQ=255)
tACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTaa > 2:1961461/1‑93 (MQ=255)
tccGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAAt < 1:643772/92‑1 (MQ=255)
aCCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAAt < 1:6238153/93‑1 (MQ=255)
aCCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAAt > 2:5361672/1‑93 (MQ=255)
cGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGa > 2:4777147/1‑93 (MQ=255)
ggAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGaa < 2:5875272/93‑1 (MQ=255)
aTACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTc < 1:778897/93‑1 (MQ=255)
aTACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTc < 1:5401119/93‑1 (MQ=255)
tACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCa < 2:728801/93‑1 (MQ=255)
tACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCa > 1:5235105/1‑93 (MQ=255)
tACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCa < 1:5146387/93‑1 (MQ=255)
aCCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCAt > 1:471632/1‑93 (MQ=255)
aCCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCAt > 1:6936650/1‑93 (MQ=255)
aCCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCAt > 1:2832531/1‑93 (MQ=255)
cccAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCATa > 1:1510003/1‑93 (MQ=255)
cccAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCATa < 2:5035055/93‑1 (MQ=255)
cAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCATAcc > 2:7303355/1‑93 (MQ=255)
aGCGCATGTAGGAAGTCGACAGCCACTTTGGGTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCATAGCa < 2:3809002/93‑1 (MQ=255)
gCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCATACCAt < 1:3988606/93‑1 (MQ=255)
gCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCATACCAt < 2:4891917/93‑1 (MQ=255)
gCGGATCGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCATACCAt < 2:3411646/93‑1 (MQ=255)
gggATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCATACCATg < 1:4368143/92‑1 (MQ=255)
ggATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCATACCATGa < 1:7830225/93‑1 (MQ=255)
ggATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCATACCATGa < 2:1410796/93‑1 (MQ=255)
tGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCATACCATGAGTc < 2:4802128/93‑1 (MQ=255)
tGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCATACCATGAGTc > 2:4619488/1‑93 (MQ=255)
tGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCATACCATGAGTc > 1:5675098/1‑93 (MQ=255)
gaagaaGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCATACCATGAGTCCa < 2:1235627/93‑1 (MQ=255)
gaagaaGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCATACCATGAGTCCa < 2:6889758/93‑1 (MQ=255)
|
GTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCATACCATGAGTCCAGG > NC_000913/1855341‑1855519
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCATACCATGAGTCCAGGCGTTA > NC_000913/1855339‑1855524
|
TAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGT > SRR4302543.85217/1‑94 (MQ=60)
TAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGT < SRR4302543.5637554/94‑1 (MQ=60)
GTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCG > SRR4302543.2676232/1‑94 (MQ=60)
GATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGAC < SRR4302543.5673582/94‑1 (MQ=60)
GATAGCCCGCCAGCGCTTCCTCAGAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGAC < SRR4302543.5673581/94‑1 (MQ=60)
ATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACA < SRR4302543.6344287/94‑1 (MQ=60)
ATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACA < SRR4302543.1183737/94‑1 (MQ=60)
ATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACA < SRR4302543.7307487/94‑1 (MQ=60)
TAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAG < SRR4302543.4017441/94‑1 (MQ=60)
TAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAG < SRR4302543.7001567/94‑1 (MQ=60)
AGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGC > SRR4302543.5130238/1‑94 (MQ=60)
GCCCGCCGGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATGCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCC < SRR4302543.6921920/94‑1 (MQ=60)
CCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCT > SRR4302543.2196401/1‑94 (MQ=60)
CCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCT < SRR4302543.4585507/94‑1 (MQ=60)
CCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCT < SRR4302543.2644733/94‑1 (MQ=60)
CCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTC < SRR4302543.4826159/94‑1 (MQ=60)
CCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTC > SRR4302543.1055819/1‑94 (MQ=60)
CCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTC < SRR4302543.2306797/94‑1 (MQ=60)
CGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCT < SRR4302543.3979041/94‑1 (MQ=60)
CGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCT < SRR4302543.924076/94‑1 (MQ=60)
GCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTT < SRR4302543.6355444/94‑1 (MQ=60)
GCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTT < SRR4302543.3225643/94‑1 (MQ=60)
GCCAGCGCGTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTT < SRR4302543.3501054/94‑1 (MQ=60)
CAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTG < SRR4302543.2351654/94‑1 (MQ=60)
CAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTG < SRR4302543.3279977/94‑1 (MQ=60)
CAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTG < SRR4302543.2791802/94‑1 (MQ=60)
CAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTG < SRR4302543.5964906/94‑1 (MQ=60)
CAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTG < SRR4302543.5964907/94‑1 (MQ=60)
AGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGG < SRR4302543.5505023/94‑1 (MQ=60)
GCGCTTCCTCATAAACGGTTTCATTACCGAAATGCCCTAATCCCGCCTCTACCGGAATCCCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGT < SRR4302543.195262/94‑1 (MQ=60)
CGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTT < SRR4302543.5797898/94‑1 (MQ=60)
GCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTA > SRR4302543.3375995/1‑94 (MQ=60)
CTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAA < SRR4302543.6796939/94‑1 (MQ=60)
CTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAA > SRR4302543.2306841/1‑94 (MQ=60)
TTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAA < SRR4302543.7466193/94‑1 (MQ=60)
TCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATAGCCAGCGGATGGCAGAAGTCGACAGCCTCTTTGGTTAAAC > SRR4302543.5421348/1‑94 (MQ=60)
TCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAAC < SRR4302543.1493101/94‑1 (MQ=60)
CCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACG > SRR4302543.6423557/1‑94 (MQ=60)
CCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACG < SRR4302543.4281382/94‑1 (MQ=60)
CTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGA > SRR4302543.96834/1‑94 (MQ=60)
CATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAAT > SRR4302543.3032079/1‑94 (MQ=60)
AAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATT > SRR4302543.7569125/1‑94 (MQ=60)
AACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTT < SRR4302543.268349/94‑1 (MQ=60)
AACGGTTCGATTACCGGCATGCCCTAACTCCGCGTCTACCGGAAGACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTT < SRR4302543.268350/94‑1 (MQ=60)
CGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTC < SRR4302543.4644858/94‑1 (MQ=60)
GGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCT < SRR4302543.6220430/94‑1 (MQ=60)
GGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCT > SRR4302543.7819805/1‑94 (MQ=60)
GGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCT > SRR4302543.1898823/1‑94 (MQ=60)
GGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCT < SRR4302543.1662671/94‑1 (MQ=60)
GGGTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCT < SRR4302543.5203196/94‑1 (MQ=60)
TTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTC < SRR4302543.2892625/94‑1 (MQ=60)
TTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTC < SRR4302543.7643688/94‑1 (MQ=60)
TTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCG < SRR4302543.1489478/94‑1 (MQ=60)
TTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCG < SRR4302543.6202513/94‑1 (MQ=60)
TTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCG < SRR4302543.7829327/94‑1 (MQ=60)
TTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCG < SRR4302543.7829326/94‑1 (MQ=60)
TTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCG < SRR4302543.4994374/94‑1 (MQ=60)
TCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGA > SRR4302543.3374038/1‑94 (MQ=60)
CATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAA > SRR4302543.2844097/1‑94 (MQ=60)
ATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAAAATTTTCTTCGAAA > SRR4302543.7391634/1‑94 (MQ=60)
TACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATC < SRR4302543.4872603/94‑1 (MQ=60)
CGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAA < SRR4302543.4691465/94‑1 (MQ=60)
CGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAA > SRR4302543.3503050/1‑94 (MQ=60)
GACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAAC > SRR4302543.520237/1‑94 (MQ=60)
CACATGCCCTAATTCCGCCTCTACCGGAATGCCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAAC < SRR4302543.1226044/94‑1 (MQ=60)
ACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACG < SRR4302543.6613239/94‑1 (MQ=60)
ACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACG < SRR4302543.329580/94‑1 (MQ=60)
ACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACG < SRR4302543.5622832/94‑1 (MQ=60)
CATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGC > SRR4302543.4165031/1‑94 (MQ=60)
CATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGC > SRR4302543.4344211/1‑94 (MQ=60)
CATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGC < SRR4302543.2709388/94‑1 (MQ=60)
ATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCG > SRR4302543.6653444/1‑94 (MQ=60)
TGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGG > SRR4302543.307496/1‑94 (MQ=60)
GCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGA > SRR4302543.6218623/1‑94 (MQ=60)
CCTAATTCCGCCTCTACCGGAATCCCCAGCGGATGGAAGAAATCGTCAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAG < SRR4302543.7081082/94‑1 (MQ=60)
CCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAG < SRR4302543.7361290/94‑1 (MQ=60)
CCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAG > SRR4302543.3798583/1‑94 (MQ=60)
CCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAG > SRR4302543.6240933/1‑94 (MQ=60)
CTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGC > SRR4302543.813976/1‑94 (MQ=60)
CTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGC > SRR4302543.5140171/1‑94 (MQ=60)
ATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATC > SRR4302543.3162908/1‑94 (MQ=60)
TCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCAC < SRR4302543.3484481/94‑1 (MQ=60)
TCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCAC < SRR4302543.4207562/94‑1 (MQ=60)
CGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGC > SRR4302543.7824182/1‑94 (MQ=60)
CGCCTCTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGC > SRR4302543.4769078/1‑94 (MQ=60)
CTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAA > SRR4302543.6537273/1‑94 (MQ=60)
CTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAA > SRR4302543.3169936/1‑94 (MQ=60)
CTACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACCCATTAA > SRR4302543.3485262/1‑94 (MQ=60)
TCCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATG < SRR4302543.649653/94‑1 (MQ=60)
ACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATG < SRR4302543.6297016/94‑1 (MQ=60)
ACCGGAATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATG < SRR4302543.3254158/94‑1 (MQ=60)
ATCCCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCA < SRR4302543.785741/94‑1 (MQ=60)
ATACCCAGCGGGTGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCA > SRR4302543.7519888/1‑94 (MQ=60)
ATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCA < SRR4302543.785740/94‑1 (MQ=60)
ATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCA > SRR4302543.5282271/1‑94 (MQ=60)
ATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCA > SRR4302543.5282272/1‑94 (MQ=60)
ATACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCA < SRR4302543.5450227/94‑1 (MQ=60)
TACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCAT > SRR4302543.2858443/1‑94 (MQ=60)
TACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCAT > SRR4302543.7001899/1‑94 (MQ=60)
TACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCAT > SRR4302543.476002/1‑94 (MQ=60)
TACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCAT < SRR4302543.5192906/94‑1 (MQ=60)
ACCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCATA > SRR4302543.1523561/1‑94 (MQ=60)
CCCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCATAC < SRR4302543.1122563/94‑1 (MQ=60)
CCAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCATACC < SRR4302543.3169346/94‑1 (MQ=60)
CAGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCATACCA > SRR4302543.7626283/1‑94 (MQ=60)
AGCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCATACCAT < SRR4302543.1548154/94‑1 (MQ=60)
GCGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCATACCATG < SRR4302543.4024046/94‑1 (MQ=60)
GGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCATACCATGA < SRR4302543.4407710/94‑1 (MQ=60)
CGGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCATACCATGA < SRR4302543.6245626/94‑1 (MQ=60)
GGATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCATACCATGAG < SRR4302543.7903958/94‑1 (MQ=60)
GATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCATACCATGAGT < SRR4302543.6764873/94‑1 (MQ=60)
ATGGAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCATACCATGAGTC > SRR4302543.5726901/1‑94 (MQ=60)
GAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCATACCATGAGTCCAG < SRR4302543.6896353/94‑1 (MQ=60)
GAAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCATACCATGAGTCCAG < SRR4302543.6466917/94‑1 (MQ=60)
AAGAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCATACCATGAGTCCAGG < SRR4302543.4702529/94‑1 (MQ=60)
GAAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCATACCATGAGTCCAGGCG > SRR4302543.7548650/1‑94 (MQ=60)
AAGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCATACCATGAGTCCAGGCGT < SRR4302543.2190771/94‑1 (MQ=60)
AGTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCATACCATGAGTCCAGGCGTT > SRR4302543.1032059/1‑94 (MQ=60)
GTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGACTTAATACCATGAGTCCAGGCGTTA > SRR4302543.3844897/1‑94 (MQ=60)
GTCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCATACCATGAGTCCAGGCGTTA > SRR4302543.2370140/1‑94 (MQ=60)
|
TAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCATACCATGAGTCCAGGCGTTA > NC_000913/1855339‑1855524
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
