Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1696 |
279.3 |
15874187 |
97.8% |
15524954 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,883,199 |
C→T |
L171L (CTG→TTG) |
yeaW → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,883,199 | 0 | C | T | 99.5%
| 703.6
/ ‑5.5
| 196 | L171L (CTG→TTG) | yeaW | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (97/98); total (98/98) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.28e-01 |
Only 100 of 202 total aligned reads displayed.
CTGGTTCCGGTGCGTCTGGAAGAATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCCTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCACGCCTGCCAACTGGAAG > NC_000913/1883109‑1883288
|
cTGGTTCCGGTGCGTCTGGAAGAATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTg > 1:511915/1‑93 (MQ=255)
cTGGTTCCGGTGCGTCTGGAAGAATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTg > 1:6207111/1‑93 (MQ=255)
ggTTCCGGTGCGTCTGGAAGAATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTggg < 1:5145081/93‑1 (MQ=255)
gTTCCGGTGCGTCTGGAAGAATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGgc < 1:4628348/93‑1 (MQ=255)
gTTCCGGTGCGTCTGGAAGAATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGgc < 2:5049792/93‑1 (MQ=255)
ttCCGGTGCGTCTGGAAGAATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGgcg > 2:5824731/1‑93 (MQ=255)
ttCCGGTGCGTCTGGAAGAATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGCGGAAGATCAATTATCCGGCTTggggg > 2:560978/1‑91 (MQ=255)
tCCGGTGCGTCTGGAAGAATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGgcgc > 2:838315/1‑93 (MQ=255)
ggTGCGTCTGGAAGAATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGaa > 1:2511087/1‑93 (MQ=255)
ggTGCGTCTGGAAGAATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGaa > 2:3611174/1‑93 (MQ=255)
tGCGTCTGGAAGAATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAg < 1:4883222/93‑1 (MQ=255)
gTCTGGAAGAATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGGAAGTGc > 2:148174/1‑93 (MQ=255)
gTCTGGAAGAATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGc > 2:6732529/1‑93 (MQ=255)
gTCTGGAAGAATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGc > 1:2330101/1‑93 (MQ=255)
tCTGGAAGAATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCt < 2:1676600/93‑1 (MQ=255)
cTGGAAGAATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTg < 2:1595066/93‑1 (MQ=255)
cTGGAAGAATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTg < 1:4115190/93‑1 (MQ=255)
tGGAAGAATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTgg < 2:3919186/93‑1 (MQ=255)
tGGAAGAATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTgg > 1:3793136/1‑93 (MQ=255)
ggAAGAATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGa > 1:3140450/1‑93 (MQ=255)
gaagaaTATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGaa < 1:5995181/93‑1 (MQ=255)
aagaaTATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAg < 2:4068513/93‑1 (MQ=255)
aagaaTATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAg > 2:630296/1‑93 (MQ=255)
aaTATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCt < 2:2334562/93‑1 (MQ=255)
atatGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTg > 1:1954706/1‑93 (MQ=255)
tatGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCCCCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGc < 1:4849508/93‑1 (MQ=255)
tatGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGc > 2:6156499/1‑93 (MQ=255)
tatGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGc < 2:6236867/93‑1 (MQ=255)
atGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGcc < 2:7869441/93‑1 (MQ=255)
tGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGccc > 1:6736514/1‑93 (MQ=255)
gCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCg > 2:4436759/1‑93 (MQ=255)
ggATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGaa < 1:1238499/93‑1 (MQ=255)
ggATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGaa < 1:3698187/93‑1 (MQ=255)
gATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAg > 2:3139865/1‑93 (MQ=255)
tCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTcc > 1:4053573/1‑93 (MQ=255)
cGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCa < 1:2984849/93‑1 (MQ=255)
gTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTacac > 2:4240450/1‑93 (MQ=255)
gTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCAc < 2:1770920/93‑1 (MQ=255)
tCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACg > 2:729395/1‑93 (MQ=255)
cTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGa > 1:6616420/1‑93 (MQ=255)
ttCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGAt > 2:113650/1‑93 (MQ=255)
ttCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGAt > 2:3465323/1‑93 (MQ=255)
ttCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGAt < 2:4793358/93‑1 (MQ=255)
ttCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGAt > 2:7621221/1‑93 (MQ=255)
tcatcaACATGGCCCCCAACGCCACCAGCGTAGAAGATCAATTGCCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATc < 1:1422327/93‑1 (MQ=255)
tcatcaACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATc > 1:5605143/1‑93 (MQ=255)
tcatcaACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGACTGCCCGGAAGTCCACGATc > 2:5718066/1‑93 (MQ=255)
catcaACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCt < 2:4712739/93‑1 (MQ=255)
catcaACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCt < 2:2510778/93‑1 (MQ=255)
atcaACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCGCGGAAGTCCACGATCta > 2:2804189/1‑92 (MQ=255)
atcaACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTg > 1:3526746/1‑93 (MQ=255)
tcaACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGa > 1:1112275/1‑93 (MQ=255)
tcaACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGa > 2:10856/1‑93 (MQ=255)
tcaACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGa > 1:6893869/1‑93 (MQ=255)
caACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGaa > 1:3277584/1‑93 (MQ=255)
aaCATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGaaa > 1:3275812/1‑93 (MQ=255)
aaCATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGaaa < 1:6963600/93‑1 (MQ=255)
aCATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAAc < 1:6498095/93‑1 (MQ=255)
aCATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAAc > 2:6562801/1‑93 (MQ=255)
cagggACCCCAACGCCACCGGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACt < 1:1306846/90‑1 (MQ=255)
tGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTgg < 1:4436760/93‑1 (MQ=255)
tGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTgg < 1:2050627/93‑1 (MQ=255)
gggccccAACGCCACCAGCGTAGAAGATCAATTGCCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTggc < 2:1961599/90‑1 (MQ=255)
gACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTggcg < 1:3860359/93‑1 (MQ=255)
aCCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTggcgc > 1:6975870/1‑92 (MQ=255)
cccAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCCGAAGTCCACGATCTGAAACTGGCGGcc > 2:2549993/1‑93 (MQ=255)
cAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTAGCGGCCCg > 2:7158008/1‑93 (MQ=255)
aCGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCt < 1:7133139/93‑1 (MQ=255)
aCGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCt < 2:4769042/93‑1 (MQ=255)
gCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCttt < 2:1177271/93‑1 (MQ=255)
caccaGCGTAGAAGATCAATTCCCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTac < 2:6923729/93‑1 (MQ=255)
caccaGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTac > 1:7279325/1‑93 (MQ=255)
cccaGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGGTTTacc < 2:7787944/92‑1 (MQ=255)
accaGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTacc > 1:5749139/1‑93 (MQ=255)
aGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTaccacc < 1:7764175/93‑1 (MQ=255)
gCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCAccc > 1:7815739/1‑93 (MQ=255)
tAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCa < 1:271234/93‑1 (MQ=255)
agaagaTCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCAc > 1:5249888/1‑93 (MQ=255)
agaagaTCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCAc < 2:5628854/93‑1 (MQ=255)
agaagaTCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCAc > 2:1917315/1‑93 (MQ=255)
aagaTCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCACGc < 2:7379944/93‑1 (MQ=255)
agaTCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCACGcc < 2:1406357/93‑1 (MQ=255)
agaTCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCACGcc < 1:399490/93‑1 (MQ=255)
agaTCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCCTTACCACCCGCACGcc < 1:7350545/93‑1 (MQ=255)
gaTCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCACGCCt > 1:4583077/1‑93 (MQ=255)
gaTCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCACGCCt > 1:2752959/1‑93 (MQ=255)
aTCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGCAACTGGCGGCCCGCTTTACCGACCGCACGCCTg > 1:6807948/1‑93 (MQ=255)
tCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCACGCCTGc > 1:2600038/1‑93 (MQ=255)
tCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCACGCCTGc < 2:2984057/93‑1 (MQ=255)
cAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCACGCCTGcc < 2:1802415/93‑1 (MQ=255)
aTTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCACGCCTGCCaa > 1:3067049/1‑93 (MQ=255)
tcccGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCACGCCTGCCAACTg < 2:6046606/92‑1 (MQ=255)
cccGGCTCGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCACGCCTGCCAACTgg > 2:3428721/1‑93 (MQ=255)
ccGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCACGCCTGCCAACTGga > 1:5764868/1‑93 (MQ=255)
ccGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCACGCCTGCCAACTGga > 1:5530299/1‑93 (MQ=255)
cGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCGCCCGCACGCCTGCCAACTGgaa < 1:6874100/93‑1 (MQ=255)
cGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCACGCCTGCCAACTGgaa < 2:3306485/93‑1 (MQ=255)
cGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCACGCCTGCCAACTGgaa < 1:16814/93‑1 (MQ=255)
cGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCACGCCTGCCAACTGgaa < 2:3043038/93‑1 (MQ=255)
cGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCACGCCTGCCAACTGgaa < 1:4778893/93‑1 (MQ=255)
|
CTGGTTCCGGTGCGTCTGGAAGAATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCCTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCACGCCTGCCAACTGGAAG > NC_000913/1883109‑1883288
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAACTGGTTCCGGTGCGTCTGGAAGAATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCCTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCACGCCTGCCAACTGGAAGAAC > NC_000913/1883106‑1883291
|
CAACTGGTTCCGGTGCGTCTGGAAGAATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCT > SRR4302543.3179080/1‑94 (MQ=60)
CAACTGGTTCCGGGGCGTCTGGAAGAAGATGCCGGATTCGTCTCCATCAACATGGACACCAACGCCACCAGCGTAGAAGATCAAATACCCGGCT > SRR4302543.3179078/1‑94 (MQ=60)
ACTGGTTCCGGTGCGTCTGGAAGAATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTG > SRR4302543.516675/1‑94 (MQ=60)
ACTGGTTCCGGTGCGTCTGGAAGAATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTG > SRR4302543.6265719/1‑94 (MQ=60)
CTGGTTCCGGTGCGTCTGGAAGAATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGG < SRR4302543.7500628/94‑1 (MQ=60)
TGGTTCCGGTGCGTCTGGAAGAATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGG < SRR4302543.3588749/94‑1 (MQ=60)
GGTTCCGGTGCGTCTGGAAGAATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGC < SRR4302543.5191592/94‑1 (MQ=60)
GTTCCGGTGCGTCTGGAAGAATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCG < SRR4302543.4670410/94‑1 (MQ=60)
TCCGGTGCGTCTGGAAGAATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCG < SRR4302543.3126426/94‑1 (MQ=60)
CGGTGCGTCTGGAAGAATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAA < SRR4302543.5372043/94‑1 (MQ=60)
CGGTGCGTCTGGAAGAATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAA > SRR4302543.2533884/1‑94 (MQ=60)
TGCGTCTGGAAGAATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGT < SRR4302543.4927734/94‑1 (MQ=60)
CGTCTGGAAGAATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGC < SRR4302543.4056423/94‑1 (MQ=60)
CGTCTGGAAGAATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGC > SRR4302543.2351254/1‑94 (MQ=60)
GTGGAAGAATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGG < SRR4302543.4152254/94‑1 (MQ=60)
CTGGAAGAATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGG < SRR4302543.4152259/94‑1 (MQ=60)
CTGGAAGAATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGG > SRR4302543.3826554/1‑94 (MQ=60)
TGGAAGAATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGA > SRR4302543.3168696/1‑94 (MQ=60)
GGAAGAATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAA > SRR4302543.4514052/1‑94 (MQ=60)
GAAGAATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAG < SRR4302543.606196/94‑1 (MQ=60)
GAAGAATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAG < SRR4302543.6050135/94‑1 (MQ=60)
AAGAATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGC > SRR4302543.7493453/1‑94 (MQ=60)
GAATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCT < SRR4302543.4291058/94‑1 (MQ=60)
AATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTG > SRR4302543.1972237/1‑94 (MQ=60)
TATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCCCCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCC < SRR4302543.4893733/94‑1 (MQ=60)
ATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCC > SRR4302543.6800145/1‑94 (MQ=60)
cgctcttccgatctccactctCATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCG < SRR4302543.2485972/73‑1 (MQ=60)
GGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAG > SRR4302543.6975533/1‑94 (MQ=60)
GGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAG > SRR4302543.3937414/1‑94 (MQ=60)
GGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAG < SRR4302543.3730698/94‑1 (MQ=60)
GGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAG < SRR4302543.1249636/94‑1 (MQ=60)
CGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAG < SRR4302543.6471611/94‑1 (MQ=60)
ATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTC > SRR4302543.7887471/1‑94 (MQ=60)
TTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCC > SRR4302543.4089851/1‑94 (MQ=60)
CGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCAC < SRR4302543.1204871/94‑1 (MQ=60)
CGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCAC > SRR4302543.143000/1‑94 (MQ=60)
CGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCAC < SRR4302543.3011953/94‑1 (MQ=60)
GTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACG > SRR4302543.5688076/1‑94 (MQ=60)
TCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGA > SRR4302543.6678807/1‑94 (MQ=60)
TTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATC > SRR4302543.5656215/1‑94 (MQ=60)
TTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATC < SRR4302543.1520591/94‑1 (MQ=60)
TCATCAACATGGCCCCCAACGCCACCAGCGTAGAAGATCAATTGCCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCT < SRR4302543.1435201/94‑1 (MQ=60)
CATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTG > SRR4302543.3558180/1‑94 (MQ=60)
CATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTG > SRR4302543.1999092/1‑94 (MQ=60)
CATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTG > SRR4302543.5991361/1‑94 (MQ=60)
ATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGA > SRR4302543.6958671/1‑94 (MQ=60)
ATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGA > SRR4302543.1122325/1‑94 (MQ=60)
TCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAA < SRR4302543.3851421/94‑1 (MQ=60)
TCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAA > SRR4302543.3307180/1‑94 (MQ=60)
CAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAA > SRR4302543.3305398/1‑94 (MQ=60)
AACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAAC < SRR4302543.7029131/94‑1 (MQ=60)
AACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAAC > SRR4302543.3824300/1‑94 (MQ=60)
ACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACT < SRR4302543.6559309/94‑1 (MQ=60)
ACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACT < SRR4302543.4860060/94‑1 (MQ=60)
ACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACT > SRR4302543.4637569/1‑94 (MQ=60)
ACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACT < SRR4302543.3413757/94‑1 (MQ=60)
CATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTG > SRR4302543.2655965/1‑94 (MQ=60)
CAGGGACCCCAACGCCACCGGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTG < SRR4302543.1318452/94‑1 (MQ=60)
TGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGC < SRR4302543.4476943/94‑1 (MQ=60)
TGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGC < SRR4302543.2068990/94‑1 (MQ=60)
GACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGG < SRR4302543.3894458/94‑1 (MQ=60)
GACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGG > SRR4302543.7041520/1‑94 (MQ=60)
GACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGC > SRR4302543.7041521/1‑94 (MQ=60)
CCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCC > SRR4302543.5807304/1‑94 (MQ=60)
CAACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGC > SRR4302543.1721212/1‑94 (MQ=60)
CAACGCCACCAGCGTAGAAGATCAATTACCCGGCCTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTCAAACTGGCGccccct > SRR4302543.4933899/1‑88 (MQ=60)
AACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCT > SRR4302543.6661100/1‑94 (MQ=60)
ACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTT < SRR4302543.7202457/94‑1 (MQ=60)
ACGCCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTT > SRR4302543.2561971/1‑94 (MQ=60)
CCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTAC > SRR4302543.7349629/1‑94 (MQ=60)
CCACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACCGGCGGCCCGCTTTAC > SRR4302543.91067/1‑94 (MQ=60)
CACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACC > SRR4302543.5801547/1‑94 (MQ=60)
ACCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCA > SRR4302543.559113/1‑94 (MQ=60)
CCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCAC > SRR4302543.707927/1‑94 (MQ=60)
CCAGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCAC > SRR4302543.2810147/1‑94 (MQ=60)
AGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCC > SRR4302543.7889390/1‑94 (MQ=60)
AGCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCC < SRR4302543.7837445/94‑1 (MQ=60)
GCGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCG < SRR4302543.3306178/94‑1 (MQ=60)
CGTAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGC > SRR4302543.2348339/1‑94 (MQ=60)
TAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCAC < SRR4302543.273619/94‑1 (MQ=60)
TAGAAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCAC > SRR4302543.5297215/1‑94 (MQ=60)
AAGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCACGCC < SRR4302543.7225221/94‑1 (MQ=60)
AGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCACGCCT > SRR4302543.4624723/1‑94 (MQ=60)
AGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCACGCCT < SRR4302543.403178/94‑1 (MQ=60)
AGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCACGCCT > SRR4302543.7354271/1‑94 (MQ=60)
AGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCACGCCT > SRR4302543.2778000/1‑94 (MQ=60)
AGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCACGCCT > SRR4302543.3062337/1‑94 (MQ=60)
AGATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCCTTACCACCCGCACGCCT < SRR4302543.7421250/94‑1 (MQ=60)
GATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGCAACTGGCGGCCCGCTTTACCGACCGCACGCCTG > SRR4302543.6872230/1‑94 (MQ=60)
GATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCACGCCTG < SRR4302543.5257101/94‑1 (MQ=60)
ATCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCACGCCTGC > SRR4302543.2623652/1‑94 (MQ=60)
TCAATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCACGCCTGCC > SRR4302543.4736826/1‑94 (MQ=60)
AATTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCACGCCTGCCAA > SRR4302543.3094630/1‑94 (MQ=60)
TTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCACGCCTGCCAACT < SRR4302543.6945162/94‑1 (MQ=60)
TTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCACGCCTGCCAACT < SRR4302543.6927447/94‑1 (MQ=60)
TTACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCACGCCTGCCAACT < SRR4302543.6840127/94‑1 (MQ=60)
TTACCCGGCTGGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCACGCCTGCCAACT < SRR4302543.3196997/94‑1 (MQ=60)
TACCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCACGCCTGCCAACTG < SRR4302543.2756371/94‑1 (MQ=60)
CCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCACGCCTGCCAACTGGA > SRR4302543.5186113/1‑94 (MQ=60)
CCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCACGCCTGCCAACTGGA > SRR4302543.5580543/1‑94 (MQ=60)
CCCGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCACGCCTGCCAACTGGA > SRR4302543.5817376/1‑94 (MQ=60)
CGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCGCCCGCACGCCTGCCAACTGGAAG < SRR4302543.6938825/94‑1 (MQ=60)
CGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCCCCCGCACGCCTGCCAACTGGAAG < SRR4302543.1258124/94‑1 (MQ=60)
CGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCACGCCTGCCAACTGGAAG < SRR4302543.4822573/94‑1 (MQ=60)
CGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCACGCCTGCCAACTGGAAG < SRR4302543.6685924/94‑1 (MQ=60)
CGGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCACGCCTGCCAACTGGAAG < SRR4302543.16971/94‑1 (MQ=60)
GGCTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCACGCCTGCCAACTGGAAGA < SRR4302543.4906293/94‑1 (MQ=60)
CTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCACGCCTGCCAACTGGAAGAAC > SRR4302543.379250/1‑94 (MQ=60)
CTTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCACGCCTGCCAACTGGAAGAAC > SRR4302543.5889796/1‑94 (MQ=60)
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CAACTGGTTCCGGTGCGTCTGGAAGAATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCCTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCACGCCTGCCAACTGGAAGAAC > NC_000913/1883106‑1883291
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
