Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1696 |
279.3 |
15874187 |
97.8% |
15524954 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,890,225 |
C→T |
R345R (CGG→CGA) |
b1808 ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,890,225 | 0 | C | T | 99.5%
| 712.6
/ NA
| 197 | R345R (CGG→CGA) | b1808 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (108/88); minor base A (0/1); total (108/89) |
| Fisher's exact test for biased strand distribution p-value = 4.52e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 203 total aligned reads displayed.
GAGCGGCGTGAGAGCCAGAGTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGCCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGTTTCGCCACGTCATAACAAAGTTC > NC_000913/1890135‑1890314
|
gAGCGGCGTGAGAGCCAGAGTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCg > 1:7205122/1‑93 (MQ=255)
aGCGGCGTGAGAGCCAGAGTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCgt < 1:5737923/93‑1 (MQ=255)
aGCGGCGTGAGAGCCAGAGTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCgt < 2:6568791/93‑1 (MQ=255)
gcggcgTGAGAGCCAGAGTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCgtg > 1:1551755/1‑93 (MQ=255)
gcggcgTGAGAGCCAGAGTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCgtg < 1:2951742/93‑1 (MQ=255)
gTGAGAGCCAGAGTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGa < 2:2121822/93‑1 (MQ=255)
tGAGAGCCAGAGTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGAt < 1:3973013/93‑1 (MQ=255)
tGAGAGCCAGAGTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGAt > 2:7451634/1‑93 (MQ=255)
gagaGCCAGAGTAAAGTGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATa > 1:1195678/1‑93 (MQ=255)
gagaGCCAGAGTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATa > 2:6093689/1‑93 (MQ=255)
gagaGCCAGAGTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATa > 2:7794163/1‑93 (MQ=255)
gagaGCCAGAGTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATa > 1:6673497/1‑93 (MQ=255)
agagCCAGAGTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATAc < 2:5846722/93‑1 (MQ=255)
agagCCAGAGTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATAc > 1:765226/1‑93 (MQ=255)
gagCCAGAGTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACa > 1:2608405/1‑93 (MQ=255)
gagCCAGAGTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACa > 2:947548/1‑93 (MQ=255)
agCCAGAGTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACaa < 2:3412966/93‑1 (MQ=255)
gCCAGAGTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAAc > 1:5526122/1‑93 (MQ=255)
gCCAGAGTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAAc < 1:127038/93‑1 (MQ=255)
cAGAGTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGCTACAATGt > 2:4688415/1‑93 (MQ=255)
cAGAGTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGt < 2:4137520/93‑1 (MQ=255)
agagTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTg < 2:5113639/93‑1 (MQ=255)
agagTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTg < 2:5275909/93‑1 (MQ=255)
agagTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTg < 2:5737731/93‑1 (MQ=255)
tAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGgcgc < 2:6521444/93‑1 (MQ=255)
aTGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTc < 1:3446033/93‑1 (MQ=255)
gcgcGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCaaa > 1:910855/1‑93 (MQ=255)
gcgcGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCaaa < 2:5235202/93‑1 (MQ=255)
gcgcGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCaaa > 2:1703642/1‑93 (MQ=255)
gcgcGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCaaa < 1:6059149/93‑1 (MQ=255)
gcccgAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCaaa < 1:6508618/90‑1 (MQ=255)
gAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCTAATGcc > 1:783943/1‑93 (MQ=255)
gAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGcc > 2:2648951/1‑93 (MQ=255)
aaGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCg > 2:1742899/1‑93 (MQ=255)
gTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCa > 1:7405921/1‑93 (MQ=255)
gCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATc < 1:4854732/93‑1 (MQ=255)
gCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATc > 1:5183666/1‑93 (MQ=255)
cATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATcc < 1:1434481/93‑1 (MQ=255)
cATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATcc < 1:225393/93‑1 (MQ=255)
ttCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAg > 1:5223712/1‑93 (MQ=255)
ttCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAg > 2:2899348/1‑93 (MQ=255)
tCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGc < 2:4312491/93‑1 (MQ=255)
tCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGc > 1:7358781/1‑93 (MQ=255)
gTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCaa < 1:3758027/93‑1 (MQ=255)
gTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCaa < 2:257363/93‑1 (MQ=255)
gTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCaa > 2:7673851/1‑93 (MQ=255)
gTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCaa > 1:7810005/1‑93 (MQ=255)
gTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCaa > 2:7544739/1‑93 (MQ=255)
tACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAg > 2:1255366/1‑93 (MQ=255)
tACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAg > 2:1550312/1‑93 (MQ=255)
ccAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGc > 1:2559335/1‑93 (MQ=255)
cAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCg < 2:3816142/93‑1 (MQ=255)
cAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCg < 1:6233161/93‑1 (MQ=255)
cAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCg > 1:3584564/1‑93 (MQ=255)
cAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCg > 2:6752137/1‑93 (MQ=255)
aGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCgg < 1:5598317/93‑1 (MQ=255)
gTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGa > 2:6870500/1‑93 (MQ=255)
gTAGCTGTAACACGGCAGTTTGATCTCTTTTAGCCGCTACGGACGTGTACGTTCCAACGTAGCGCGCTCAAATGCCACATCCCGCCAGGCGGa < 2:6000263/93‑1 (MQ=255)
tAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGaa < 2:1176268/93‑1 (MQ=255)
tAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGaa < 2:2722586/93‑1 (MQ=255)
aGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGaag > 2:1933254/1‑92 (MQ=255)
aGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAAc < 2:5415613/93‑1 (MQ=255)
gCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACg > 1:4034989/1‑93 (MQ=255)
cTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGc > 1:5030826/1‑93 (MQ=255)
tGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGcc > 1:4703088/1‑93 (MQ=255)
gTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGccc > 2:304262/1‑93 (MQ=255)
gTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGccc > 1:3311819/1‑93 (MQ=255)
gTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGccc > 2:2197559/1‑93 (MQ=255)
gCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCACATGCCGCATCCAGCAAGGCGGAACGCCCCAg > 2:3967991/1‑93 (MQ=255)
gCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAg > 2:705108/1‑93 (MQ=255)
cccGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGt < 1:7587264/93‑1 (MQ=255)
cccGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGt > 1:3175627/1‑93 (MQ=255)
ccGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTg > 1:2825821/1‑93 (MQ=255)
ccGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTg > 1:3782838/1‑93 (MQ=255)
ccGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGACGCATCCAGCACGGCGGAACGACCCAGTg > 2:4076030/1‑93 (MQ=255)
gCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACa > 2:2537952/1‑93 (MQ=255)
cTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAg < 2:803197/93‑1 (MQ=255)
tgattgatCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGt > 2:5297329/1‑93 (MQ=255)
tgattgatCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGt > 1:4396104/1‑93 (MQ=255)
tgattgatCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGt > 2:7224315/1‑93 (MQ=255)
tgattgatCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGt > 2:7189134/1‑93 (MQ=255)
gattgatCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGtt < 1:3517496/93‑1 (MQ=255)
gattgatCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGtt > 1:7156299/1‑93 (MQ=255)
attgatCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGttt < 2:7320962/93‑1 (MQ=255)
attgatCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGAATCCAGCAAGGCGGAACGCCCCAGTGACAGttt < 1:6965252/93‑1 (MQ=255)
tgatCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGTTTCg > 1:6573549/1‑93 (MQ=255)
tgatCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGTTTCg > 1:3710807/1‑93 (MQ=255)
tgatCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGTTTCg > 1:775945/1‑93 (MQ=255)
gatCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGTTTCGc > 1:7056374/1‑93 (MQ=255)
tctcTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGTTTCGCCa > 2:1614657/1‑93 (MQ=255)
tctcTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGTTTCGCCa > 2:6159543/1‑93 (MQ=255)
ctctTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCACGGCGGAACGCCCCAGTGACAGTTTCGCCAc > 2:2446494/1‑93 (MQ=255)
tctTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGTTTCGCCACg > 2:5600705/1‑93 (MQ=255)
ttttAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGCGACAGTTTCGCCACGTc > 1:728159/1‑93 (MQ=255)
ttAGCCGCTTCAGTCGTGTGCGGTACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGTTTCGCCACGTCAt > 2:3907756/1‑93 (MQ=255)
ttAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGTTTCGCCACGTCAt < 2:2392215/93‑1 (MQ=255)
tAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGTTTCGCCACGTCATa > 1:888945/1‑93 (MQ=255)
gCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGTTTCGCCACGTCATAAc > 2:6424535/1‑93 (MQ=255)
gCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGTTTCGCCACGTCATAACaaa > 2:3060532/1‑93 (MQ=255)
ttCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGTTTCGCCACGTCATAACAAAGt > 1:2479291/1‑93 (MQ=255)
|
GAGCGGCGTGAGAGCCAGAGTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGCCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGTTTCGCCACGTCATAACAAAGTTC > NC_000913/1890135‑1890314
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CTGAGCGGCGTGAGAGCCAGAGTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGCCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGTTTCGCCACGTCATAACAAAGTTCCAGG > NC_000913/1890133‑1890318
|
CTGAGCGGCGTGAGAGCCAGAGTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTC > SRR4302543.935422/1‑94 (MQ=60)
TGAGCGGCGTGAGAGCCAGAGTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCG > SRR4302543.7274975/1‑94 (MQ=60)
AGCGGCGTGAGAGCCAGAGTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTG < SRR4302543.5790248/94‑1 (MQ=60)
AGCGGCGTGAGAGCCAGAGTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTG > SRR4302543.1565632/1‑94 (MQ=60)
AGCGGCGTGAGAGCCAGAGTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTG > SRR4302543.3059914/1‑94 (MQ=60)
GCGGCGTGAGAGCCAGAGTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGT < SRR4302543.4288432/94‑1 (MQ=60)
GCGGCGTGAGAGCCAGAGTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGT < SRR4302543.2978542/94‑1 (MQ=60)
CGGCGTGAGAGCCAGAGTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTG < SRR4302543.1504834/94‑1 (MQ=60)
GGCGTGAGAGCCAGAGTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGC < SRR4302543.6272812/94‑1 (MQ=60)
GCGTGAGAGCCAGAGTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCG > SRR4302543.2574098/1‑94 (MQ=60)
GTGAGAGCCAGAGTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGAT < SRR4302543.1261928/94‑1 (MQ=60)
GTGAGAGCCAGAGTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGAT > SRR4302543.5185441/1‑94 (MQ=60)
TGAGAGCCAGAGTAAAGTGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATA > SRR4302543.1206455/1‑94 (MQ=60)
TGAGAGCCAGAGTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATA < SRR4302543.4008231/94‑1 (MQ=60)
TGAGAGCCAGAGTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATA > SRR4302543.6736505/1‑94 (MQ=60)
GAGAGCCAGAGTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATAC > SRR4302543.771959/1‑94 (MQ=60)
AGAGCCAGAGTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACA > SRR4302543.2632093/1‑94 (MQ=60)
AGCCAGAGTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAAC > SRR4302543.2871221/1‑94 (MQ=60)
AGCCAGAGTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAAC > SRR4302543.5576318/1‑94 (MQ=60)
GCCAGAGTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACG < SRR4302543.128182/94‑1 (MQ=60)
CAGAGTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTG < SRR4302543.5244121/94‑1 (MQ=60)
CAGAGTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTG < SRR4302543.3608200/94‑1 (MQ=60)
CAGAGTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTG > SRR4302543.327708/1‑94 (MQ=60)
CAGAGTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTG > SRR4302543.7203983/1‑94 (MQ=60)
GTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGC < SRR4302543.5564525/94‑1 (MQ=60)
GTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGC > SRR4302543.6727228/1‑94 (MQ=60)
aaagggccggagggGCATTGGTACCAGTAGCTGTAGCCCGGGTGATTGAGCTCTTGTAGGCGCTGGAGTCGTGGGCGATACAACGTGGCGCGCT < SRR4302543.7620085/80‑1 (MQ=28)
ATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCA < SRR4302543.3476888/94‑1 (MQ=60)
TGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACCTGGCGCGCTCAA > SRR4302543.4065981/1‑94 (MQ=60)
GGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAA > SRR4302543.918862/1‑94 (MQ=60)
GCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAAT < SRR4302543.7119616/94‑1 (MQ=60)
GCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAAT < SRR4302543.6116512/94‑1 (MQ=60)
GCCCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAAT < SRR4302543.6569926/94‑1 (MQ=60)
CGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATG < SRR4302543.3829460/94‑1 (MQ=60)
CGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCTAATGCC > SRR4302543.790844/1‑94 (MQ=60)
GAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCG < SRR4302543.7237211/94‑1 (MQ=60)
AGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCA > SRR4302543.7476996/1‑94 (MQ=60)
TGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATC > SRR4302543.5230440/1‑94 (MQ=60)
GCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCC < SRR4302543.4899004/94‑1 (MQ=60)
CATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCA < SRR4302543.227340/94‑1 (MQ=60)
CATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCA < SRR4302543.1447447/94‑1 (MQ=60)
AATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCA < SRR4302543.2280941/94‑1 (MQ=60)
ATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAG > SRR4302543.5270745/1‑94 (MQ=60)
TTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGC > SRR4302543.7429559/1‑94 (MQ=60)
CGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAA > SRR4302543.7883620/1‑94 (MQ=60)
GTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAG < SRR4302543.7383654/94‑1 (MQ=60)
GTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAG < SRR4302543.3791094/94‑1 (MQ=60)
ACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGGGCGCTCAAATGCCGCATCCAGCAAGGG > SRR4302543.2582722/1‑94 (MQ=60)
ACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGC > SRR4302543.2582721/1‑94 (MQ=60)
CCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCG > SRR4302543.3616222/1‑94 (MQ=60)
CCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCG < SRR4302543.7832638/94‑1 (MQ=60)
CAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGG < SRR4302543.6291985/94‑1 (MQ=60)
AGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGA > SRR4302543.6786471/1‑94 (MQ=60)
AGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGA < SRR4302543.5005762/94‑1 (MQ=60)
AGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGA < SRR4302543.5649316/94‑1 (MQ=60)
TAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAAC < SRR4302543.6752107/94‑1 (MQ=60)
AGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACG > SRR4302543.4071084/1‑94 (MQ=60)
AGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACG < SRR4302543.7344155/94‑1 (MQ=60)
GCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGC > SRR4302543.2800501/1‑94 (MQ=60)
GCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGC > SRR4302543.5076596/1‑94 (MQ=60)
CTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCC > SRR4302543.4746057/1‑94 (MQ=60)
TGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCC > SRR4302543.4815860/1‑94 (MQ=60)
TGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCC > SRR4302543.3341712/1‑94 (MQ=60)
AGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAG > SRR4302543.912653/1‑94 (MQ=60)
GCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGT > SRR4302543.3204239/1‑94 (MQ=60)
CCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTG < SRR4302543.7659362/94‑1 (MQ=60)
CCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTG > SRR4302543.3816163/1‑94 (MQ=60)
CCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTG < SRR4302543.7659361/94‑1 (MQ=60)
CCCGGCTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTG > SRR4302543.2851670/1‑94 (MQ=60)
CTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGT > SRR4302543.4435958/1‑94 (MQ=60)
CTGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGT > SRR4302543.5690653/1‑94 (MQ=60)
TGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGTT > SRR4302543.7225850/1‑94 (MQ=60)
TGATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGGT > SRR4302543.1314355/1‑94 (MQ=60)
GATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGTTT < SRR4302543.3548901/94‑1 (MQ=60)
GATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGTTT > SRR4302543.7979272/1‑94 (MQ=60)
GATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGTTT > SRR4302543.7442388/1‑94 (MQ=60)
ATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGTTTC > SRR4302543.3347079/1‑94 (MQ=60)
ATTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGAATCCAGCAAGGCGGAACGCCCCAGTGACAGTTTC < SRR4302543.7030799/94‑1 (MQ=60)
TTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCACATGCCGCATCCAGCCAGGCGGACAGCCCCAGCGACAGTTTCG > SRR4302543.6635437/1‑94 (MQ=60)
TTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGTTTCG > SRR4302543.3743438/1‑94 (MQ=60)
TTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGTTTCG > SRR4302543.782763/1‑94 (MQ=60)
TTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGTTTCG > SRR4302543.3778707/1‑94 (MQ=60)
TTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGTTTCG > SRR4302543.6635438/1‑94 (MQ=60)
TTGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGTTTCC > SRR4302543.782765/1‑94 (MQ=60)
TGATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGTTTCGC > SRR4302543.7124852/1‑94 (MQ=60)
GATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGTTTCGCC > SRR4302543.4582065/1‑94 (MQ=60)
ATCTCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGTTTCGCCA < SRR4302543.3801107/94‑1 (MQ=60)
TCTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGTTTCGCCACGT < SRR4302543.3649956/94‑1 (MQ=60)
CTTTTAGCCGCTTCAGTCTTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGTTTCGCCACGTC > SRR4302543.5982281/1‑94 (MQ=60)
CTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGTTTCGCCACGTC < SRR4302543.2112486/94‑1 (MQ=60)
CTTTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGCGACAGTTTCGCCACGTC > SRR4302543.734701/1‑94 (MQ=60)
TTTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGTTTCGCCACGTCAT < SRR4302543.6304806/94‑1 (MQ=60)
TTAGCCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGTTTCGCCACGTCATA > SRR4302543.896813/1‑94 (MQ=60)
CCGCTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGTTTCGCCACGTCATAACAA > SRR4302543.5584905/1‑94 (MQ=60)
CTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGTTTCGCCACGTCATAACAAAGT > SRR4302543.2501722/1‑94 (MQ=60)
CTTCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGTTTCGCCACGTCATAACAAAGT > SRR4302543.75673/1‑94 (MQ=60)
CTTCAGTCGTGTGCGATACAACGTGGCGCGATCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGTTGCGCCACGTCATAACAAAGT < SRR4302543.7888594/94‑1 (MQ=60)
TCAGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGTTTCGCCACGTCATAACAAAGTTC > SRR4302543.3485740/1‑94 (MQ=60)
AGTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGTTTCGCCACGTCATAACAAAGTTCCA > SRR4302543.2795557/1‑94 (MQ=60)
GTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGTTTCGCCACGTCATAACAAAGTTCCAG > SRR4302543.7046485/1‑94 (MQ=60)
GTCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGTTTCGCCACGTCATAACAAAGCTCCAG > SRR4302543.1472818/1‑94 (MQ=60)
TCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGTTTCGCCACGTCATAACAAAGTTCCAGG < SRR4302543.140286/94‑1 (MQ=60)
TCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGTTTCGCCACGTCATAACAAAGTTCCAGG < SRR4302543.5964047/94‑1 (MQ=60)
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CTGAGCGGCGTGAGAGCCAGAGTAAAATGGCGCGAAGTGCATTCGTACCAGTAGCTGTAGCCCGGCTGATTGATCTCTTTTAGCCGCTTCAGCCGTGTGCGATACAACGTGGCGCGCTCAAATGCCGCATCCAGCAAGGCGGAACGCCCCAGTGACAGTTTCGCCACGTCATAACAAAGTTCCAGG > NC_000913/1890133‑1890318
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
