Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1696 |
279.3 |
15874187 |
97.8% |
15524954 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,917,590 |
T→C |
V688A (GTC→GCC) |
b1834 → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,917,590 | 0 | T | C | 100.0%
| 682.3
/ NA
| 214 | V688A (GTC→GCC) | b1834 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (121/93); total (121/93) |
Only 100 of 219 total aligned reads displayed.
TCGGTATTGATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGTCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTATCCTCC > NC_000913/1917500‑1917679
|
tcGGTATTGATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGccc > 1:4889649/1‑93 (MQ=255)
ggTATTGATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAg > 1:3493422/1‑93 (MQ=255)
gTATTGATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGa > 1:2912402/1‑93 (MQ=255)
ttGATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCt > 1:6099063/1‑93 (MQ=255)
ttGATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCt < 2:1342227/93‑1 (MQ=255)
ttGATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCt < 2:2076048/93‑1 (MQ=255)
gATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCttt > 1:3140140/1‑93 (MQ=255)
atatCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTg > 2:546191/1‑93 (MQ=255)
tatCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGc < 1:1793398/93‑1 (MQ=255)
tatCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGc > 1:7072776/1‑93 (MQ=255)
tatCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGc > 2:288449/1‑93 (MQ=255)
tatCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGc > 1:1970528/1‑93 (MQ=255)
gggCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTcgc < 1:776286/93‑1 (MQ=255)
gggCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTcgc > 2:3569550/1‑93 (MQ=255)
aTCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCggtgta > 1:1148462/1‑91 (MQ=255)
aTCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCggtggt < 1:4755695/93‑1 (MQ=255)
aTCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCggtggt < 1:6777525/93‑1 (MQ=255)
aTCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTGACCCGGAATATGCCCAGACCTTTGCTCGCggtggt < 1:4715467/93‑1 (MQ=255)
ccAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTAc < 1:2201966/93‑1 (MQ=255)
ccAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTAc < 2:6743893/93‑1 (MQ=255)
cAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTAcg > 1:4662815/1‑93 (MQ=255)
cAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTAcg > 2:1776365/1‑93 (MQ=255)
gACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTAcgcg > 2:7442754/1‑93 (MQ=255)
cTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTtc < 2:3121517/93‑1 (MQ=255)
ggATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTtctc > 1:6201944/1‑93 (MQ=255)
ggATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTtctc < 1:6127170/93‑1 (MQ=255)
gATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCa < 2:4388462/93‑1 (MQ=255)
aTCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAg < 2:7844350/93‑1 (MQ=255)
gATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGt > 2:3921832/1‑93 (MQ=255)
aTTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTc > 2:1490814/1‑93 (MQ=255)
aTTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTc > 2:6921013/1‑93 (MQ=255)
ttACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTca < 2:5329866/93‑1 (MQ=255)
ttACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTca > 2:3234352/1‑93 (MQ=255)
ttACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTca > 2:2577399/1‑93 (MQ=255)
tACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTcac < 2:6149162/93‑1 (MQ=255)
cgcacgcaATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACAcc > 2:4486827/1‑93 (MQ=255)
cgcacgcaATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACAcc < 1:2562553/93‑1 (MQ=255)
gcacgcaATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCg > 2:4308853/1‑93 (MQ=255)
caATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAAt > 2:1707485/1‑93 (MQ=255)
caATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGGGGTCATACCGCAAAt < 2:3726866/93‑1 (MQ=255)
aTGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAAttt > 1:3721093/1‑93 (MQ=255)
aTGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAAttt < 2:2933349/93‑1 (MQ=255)
tGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGCCCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTc < 1:102198/93‑1 (MQ=255)
tGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTc < 1:4444212/93‑1 (MQ=255)
tGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTc > 2:5765352/1‑93 (MQ=255)
gAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCg > 1:2740313/1‑93 (MQ=255)
aaGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCgg > 1:4260003/1‑93 (MQ=255)
aaGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCgg < 1:1259860/93‑1 (MQ=255)
aaGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCgg > 1:936330/1‑93 (MQ=255)
aGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGc < 2:3873923/93‑1 (MQ=255)
gtgcAGGCAAAGGCGGTACTTGACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCa < 2:1052380/90‑1 (MQ=255)
gTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCa > 1:4187593/1‑93 (MQ=255)
gTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCa > 1:3550953/1‑93 (MQ=255)
tACAGGCAAAGGCGGTACTTTTCCCGGAAGATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAg < 1:1047645/93‑1 (MQ=255)
aCAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGc < 1:5067577/93‑1 (MQ=255)
aCAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGc < 2:5168585/93‑1 (MQ=255)
aCAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGc < 1:5907046/93‑1 (MQ=255)
aGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTg > 2:1573340/1‑93 (MQ=255)
aGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTg > 1:1561915/1‑93 (MQ=255)
aGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTg < 2:6490372/93‑1 (MQ=255)
ggCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTgg > 1:3060634/1‑93 (MQ=255)
gCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGc < 1:1470/93‑1 (MQ=255)
cAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCg > 2:1858893/1‑93 (MQ=255)
aaaGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGt > 1:2664224/1‑93 (MQ=255)
aaGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGtt > 1:7820593/1‑93 (MQ=255)
aaGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGtt > 1:3310275/1‑93 (MQ=255)
ggCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGa < 2:542571/93‑1 (MQ=255)
ggCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGa < 2:5044838/93‑1 (MQ=255)
ggCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGa < 1:3989552/93‑1 (MQ=255)
cGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGc < 1:60365/93‑1 (MQ=255)
ggTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCa < 2:6862739/93‑1 (MQ=255)
gTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCAt < 2:6018939/93‑1 (MQ=255)
gTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCAt > 2:4104763/1‑93 (MQ=255)
gTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCAt > 1:7579536/1‑93 (MQ=255)
gTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCAt > 1:6269771/1‑93 (MQ=255)
tACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATc < 2:634821/93‑1 (MQ=255)
tACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCAGCAGCTGGCGTTGAGCATc > 1:2979243/1‑93 (MQ=255)
aCTTTACCCGGAATATGCCCAGACCTTTGCGCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCt < 1:6864658/93‑1 (MQ=255)
cTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCtt > 2:7673376/1‑93 (MQ=255)
cTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCtt > 2:711914/1‑93 (MQ=255)
cTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCtt > 1:6518553/1‑93 (MQ=255)
cTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCtt > 1:1859002/1‑93 (MQ=255)
cTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTAAGCATCtt < 1:5080811/93‑1 (MQ=255)
tttACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTg > 2:763049/1‑93 (MQ=255)
ttACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGa > 2:3424604/1‑93 (MQ=255)
aCCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATa > 2:4226343/1‑93 (MQ=255)
aCCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATa < 2:4722660/93‑1 (MQ=255)
cccGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATAc > 1:1423761/1‑93 (MQ=255)
cccGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATAc < 1:7256016/93‑1 (MQ=255)
ccGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCCTGATACt > 1:1951260/1‑93 (MQ=255)
cGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTa > 1:5830691/1‑93 (MQ=255)
cGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTa < 1:7556377/93‑1 (MQ=255)
cGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTa > 1:5737125/1‑93 (MQ=255)
cGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTa < 2:7753192/93‑1 (MQ=255)
ggAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCGGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTAt > 2:3338060/1‑93 (MQ=255)
aaTATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTAtcc > 1:42553/1‑93 (MQ=255)
atatGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTAtcct > 1:6590733/1‑93 (MQ=255)
atatGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTAtcct > 1:5412138/1‑93 (MQ=255)
tatGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTAtcctc > 2:2253757/1‑93 (MQ=255)
atGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTAtcctcc < 2:6711859/93‑1 (MQ=255)
|
TCGGTATTGATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGTCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTATCCTCC > NC_000913/1917500‑1917679
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TCTCGGTATTGATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGTCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTATCCTCCAGC > NC_000913/1917498‑1917682
|
TCTCGGTATTGATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCC < SRR4302543.2455517/94‑1 (MQ=60)
CTCGGTATTGATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCC < SRR4302543.4752083/94‑1 (MQ=60)
CTCGGTATTGATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCC > SRR4302543.4934225/1‑94 (MQ=60)
CTCGGTATTGATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCC < SRR4302543.7037656/94‑1 (MQ=60)
CTCGGTATTGATATCGGGCAAACCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCC < SRR4302543.4752082/94‑1 (MQ=60)
TCGGTATTGATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCA > SRR4302543.3778728/1‑94 (MQ=60)
TCGGTATTGATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGAAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCA > SRR4302543.5522273/1‑94 (MQ=60)
CGGTATTGATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAG > SRR4302543.3524687/1‑94 (MQ=60)
CGGTATTGATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAG < SRR4302543.6283091/94‑1 (MQ=60)
GGTATTGATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGA > SRR4302543.2938869/1‑94 (MQ=60)
ATTGATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCT > SRR4302543.1041115/1‑94 (MQ=60)
ATTGATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCT > SRR4302543.6156851/1‑94 (MQ=60)
TTGATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTT < SRR4302543.1926110/94‑1 (MQ=60)
TGATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTT > SRR4302543.3168384/1‑94 (MQ=60)
ATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGC > SRR4302543.1733765/1‑94 (MQ=60)
ATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGC > SRR4302543.7141446/1‑94 (MQ=60)
ATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGC > SRR4302543.1988189/1‑94 (MQ=60)
TATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCT < SRR4302543.1809444/94‑1 (MQ=60)
TCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCG < SRR4302543.4860301/94‑1 (MQ=60)
CGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGC < SRR4302543.6819131/94‑1 (MQ=60)
GGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCG < SRR4302543.783107/94‑1 (MQ=60)
GGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGG > SRR4302543.5946589/1‑94 (MQ=60)
AAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGG > SRR4302543.435860/1‑94 (MQ=60)
AATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGta > SRR4302543.1158925/1‑92 (MQ=60)
AATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGT < SRR4302543.211708/94‑1 (MQ=60)
ATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTA < SRR4302543.4799157/94‑1 (MQ=60)
ATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTA < SRR4302543.6841542/94‑1 (MQ=60)
ATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTGACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTA < SRR4302543.4758549/94‑1 (MQ=60)
TCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTAC < SRR4302543.5989554/94‑1 (MQ=60)
CCAGACGCTGGATCTGATTACCGCACGCAGTGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACG > SRR4302543.5358664/1‑94 (MQ=60)
CCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACG < SRR4302543.2221783/94‑1 (MQ=60)
CCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACG > SRR4302543.4705304/1‑94 (MQ=60)
CAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGC > SRR4302543.509621/1‑94 (MQ=60)
AGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCG < SRR4302543.786707/94‑1 (MQ=60)
GACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGC > SRR4302543.6866483/1‑94 (MQ=60)
TGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTC > SRR4302543.6260517/1‑94 (MQ=60)
GGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCA < SRR4302543.6185202/94‑1 (MQ=60)
GGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCA < SRR4302543.6185200/94‑1 (MQ=60)
GGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCA > SRR4302543.3020149/1‑94 (MQ=60)
GATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAG < SRR4302543.3214908/94‑1 (MQ=60)
GATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAG > SRR4302543.112797/1‑94 (MQ=60)
GATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGGGGTACGCGCTTCTCAG > SRR4302543.6126837/1‑94 (MQ=60)
TCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTG < SRR4302543.156699/94‑1 (MQ=60)
CTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGG > SRR4302543.1560328/1‑94 (MQ=60)
TGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGT > SRR4302543.7316219/1‑94 (MQ=60)
TGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGT < SRR4302543.7818307/94‑1 (MQ=60)
TGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGT > SRR4302543.4296750/1‑94 (MQ=60)
ATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCA > SRR4302543.7960897/1‑94 (MQ=60)
ATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCA > SRR4302543.7974546/1‑94 (MQ=60)
ATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCA < SRR4302543.7455103/94‑1 (MQ=60)
CCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACC < SRR4302543.1981000/94‑1 (MQ=60)
CGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCG < SRR4302543.2541335/94‑1 (MQ=60)
CGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCG < SRR4302543.723754/94‑1 (MQ=60)
CGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCG < SRR4302543.4681220/94‑1 (MQ=60)
CGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCG < SRR4302543.2585964/94‑1 (MQ=60)
AATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTT > SRR4302543.3753815/1‑94 (MQ=60)
AATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTT > SRR4302543.4787835/1‑94 (MQ=60)
AATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTT > SRR4302543.1321663/1‑94 (MQ=60)
TGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGCCCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCG < SRR4302543.103142/94‑1 (MQ=60)
TGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCG < SRR4302543.4484459/94‑1 (MQ=60)
TGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCG > SRR4302543.2765240/1‑94 (MQ=60)
TGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCG < SRR4302543.3635180/94‑1 (MQ=60)
GAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGG > SRR4302543.4298688/1‑94 (MQ=60)
GAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGG > SRR4302543.944512/1‑94 (MQ=60)
AAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGC < SRR4302543.1271132/94‑1 (MQ=60)
AGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCA > SRR4302543.4225555/1‑94 (MQ=60)
AGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCA > SRR4302543.3582451/1‑94 (MQ=60)
AGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCA < SRR4302543.3554606/94‑1 (MQ=60)
AGTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCA < SRR4302543.1862647/94‑1 (MQ=60)
GTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAG < SRR4302543.1462054/94‑1 (MQ=60)
GTACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAG > SRR4302543.3470654/1‑94 (MQ=60)
TACAGGCAAAGGCGGTACTTTTCCCGGAAGATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGC < SRR4302543.1057028/94‑1 (MQ=60)
ACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCT < SRR4302543.5960958/94‑1 (MQ=60)
ACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCT < SRR4302543.2145603/94‑1 (MQ=60)
ACAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCT < SRR4302543.5113579/94‑1 (MQ=60)
CAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTG > SRR4302543.1575860/1‑94 (MQ=60)
CAGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTG < SRR4302543.2775557/94‑1 (MQ=60)
AGGCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGG > SRR4302543.3088169/1‑94 (MQ=60)
GCAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCG < SRR4302543.1486/94‑1 (MQ=60)
CAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGT > SRR4302543.2688378/1‑94 (MQ=60)
CAAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGT > SRR4302543.6559041/1‑94 (MQ=60)
AAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTT > SRR4302543.3340152/1‑94 (MQ=60)
AAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTT > SRR4302543.7894270/1‑94 (MQ=60)
AAAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTT > SRR4302543.2660167/1‑94 (MQ=60)
AAGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGCGGTTG > SRR4302543.4466720/1‑94 (MQ=60)
AGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGA < SRR4302543.3095552/94‑1 (MQ=60)
AGGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGA > SRR4302543.3681640/1‑94 (MQ=60)
GGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAG > SRR4302543.3000939/1‑94 (MQ=60)
GGCGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAG < SRR4302543.4025013/94‑1 (MQ=60)
CGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGggct > SRR4302543.6641296/1‑90 (MQ=60)
CGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCA < SRR4302543.60898/94‑1 (MQ=60)
CGGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCA < SRR4302543.118682/94‑1 (MQ=60)
GGTACTTTACCCGTAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCAT > SRR4302543.2729940/1‑94 (MQ=60)
GGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCAT > SRR4302543.7651596/1‑94 (MQ=60)
GGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCAT > SRR4302543.6328895/1‑94 (MQ=60)
GGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCAT < SRR4302543.4734286/94‑1 (MQ=60)
GGTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCAT > SRR4302543.6188339/1‑94 (MQ=60)
GTACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCAGCAGCTGGCGTTGAGCATC > SRR4302543.3006296/1‑94 (MQ=60)
ACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTT > SRR4302543.6579942/1‑94 (MQ=60)
ACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTT > SRR4302543.1875707/1‑94 (MQ=60)
ACTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTT > SRR4302543.2955656/1‑94 (MQ=60)
ACTTTACCCGGAATATGCCCAGACCTTTGCGCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTT < SRR4302543.6929336/94‑1 (MQ=60)
CTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTG > SRR4302543.6371731/1‑94 (MQ=60)
CTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTG < SRR4302543.7630548/94‑1 (MQ=60)
CTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTG < SRR4302543.4080346/94‑1 (MQ=60)
CTTTACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTAAGCATCTTG < SRR4302543.5126890/94‑1 (MQ=60)
ACCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATAC > SRR4302543.1436647/1‑94 (MQ=60)
CCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACT > SRR4302543.4267851/1‑94 (MQ=60)
CCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACT < SRR4302543.7326159/94‑1 (MQ=60)
CCCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCCTGATACT > SRR4302543.1968758/1‑94 (MQ=60)
CCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTT > SRR4302543.5883723/1‑94 (MQ=60)
CCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTA > SRR4302543.5789446/1‑94 (MQ=60)
CCGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTA > SRR4302543.5883724/1‑94 (MQ=60)
CGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTAT > SRR4302543.4993351/1‑94 (MQ=60)
CGGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTAT < SRR4302543.7628327/94‑1 (MQ=60)
GGAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATAATATC > SRR4302543.5941777/1‑94 (MQ=60)
GAATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTATCC > SRR4302543.42944/1‑94 (MQ=60)
GATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTATCCT < SRR4302543.5124612/94‑1 (MQ=60)
AATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTATCCT > SRR4302543.6937355/1‑94 (MQ=60)
AATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTATCCT > SRR4302543.5461368/1‑94 (MQ=60)
AATATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTATCCT > SRR4302543.6652825/1‑94 (MQ=60)
ATGCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTATCCTCCA > SRR4302543.6806764/1‑94 (MQ=60)
GCCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTATCCTCCAGC < SRR4302543.3216232/94‑1 (MQ=60)
|
TCTCGGTATTGATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGTCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTATCCTCCAGC > NC_000913/1917498‑1917682
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
