Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1696 |
279.3 |
15874187 |
97.8% |
15524954 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,934,482 |
T→C |
intergenic (‑144/‑194) |
zwf ← / → yebK |
glucose‑6‑phosphate dehydrogenase/hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,934,482 | 0 | T | C | 99.5%
| 582.7
/ ‑4.9
| 186 | intergenic (‑144/‑194) | zwf/yebK | glucose‑6‑phosphate dehydrogenase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (78/107); total (78/108) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.21e-01 |
Only 100 of 192 total aligned reads displayed.
TTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATG‑AAAAAAAATAACAACTTTTTTAT > NC_000913/1934392‑1934571
|
ttttCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCCCCCGTGCGATTACGGGAAAAGCGCGCAAAgcgc < 1:2102106/93‑1 (MQ=255)
ttCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCGACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCgg > 1:4028646/1‑93 (MQ=255)
ttCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCgg < 1:4257460/93‑1 (MQ=255)
ttCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCgg > 1:7578781/1‑93 (MQ=255)
tACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCaaa > 1:5026170/1‑93 (MQ=255)
aCGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCaaaa > 2:6458032/1‑93 (MQ=255)
cGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAAc > 2:5497839/1‑93 (MQ=255)
ggTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACt < 2:416648/93‑1 (MQ=255)
ggTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACt > 1:3406835/1‑93 (MQ=255)
gTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTg < 2:5845362/93‑1 (MQ=255)
gCACTGTACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGAt > 2:1888866/1‑93 (MQ=255)
cACTGTACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATa < 2:6219665/93‑1 (MQ=255)
cACTGTACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATa < 1:2870007/93‑1 (MQ=255)
tGTACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATaaaa > 2:4474942/1‑93 (MQ=255)
tGTACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATaaaa < 1:7497973/93‑1 (MQ=255)
gTACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATaaaaa > 1:1008745/1‑93 (MQ=255)
gTACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATaaaaa > 1:3784165/1‑93 (MQ=255)
gTACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATaaaaa > 2:7835595/1‑93 (MQ=255)
cTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAat > 2:5664605/1‑93 (MQ=255)
cTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAat > 1:1105296/1‑93 (MQ=255)
tGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAatc < 2:3029880/93‑1 (MQ=255)
tGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAatc < 1:1941528/93‑1 (MQ=255)
tGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAatc > 2:6057335/1‑93 (MQ=255)
tGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAatc < 1:4733289/93‑1 (MQ=255)
cTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAatcat < 1:3157389/93‑1 (MQ=255)
cGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGtttt > 1:1395743/1‑93 (MQ=255)
gAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTc < 1:825817/93‑1 (MQ=255)
aGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTcc > 2:2630404/1‑93 (MQ=255)
aGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTcc < 2:4438205/93‑1 (MQ=255)
aGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTcc > 1:1041480/1‑93 (MQ=255)
ttGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCAtt > 2:3516870/1‑93 (MQ=255)
ttGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCAtt < 2:1791483/93‑1 (MQ=255)
tGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTg > 1:3204781/1‑93 (MQ=255)
tgAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTggg < 2:5010380/92‑1 (MQ=255)
aaaaCTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTa < 1:7736269/93‑1 (MQ=255)
aaCTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTaaa > 1:2390760/1‑93 (MQ=255)
aCTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTaaaa < 1:2778331/93‑1 (MQ=255)
aCTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTaaaa > 1:5573428/1‑93 (MQ=255)
tGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAAt > 1:2213984/1‑93 (MQ=255)
tGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAAt > 1:1916336/1‑93 (MQ=255)
gTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATc < 2:4873558/93‑1 (MQ=255)
gTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATc > 2:3637659/1‑93 (MQ=255)
tAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCt > 1:6124799/1‑93 (MQ=255)
aaCGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGa < 2:2609442/93‑1 (MQ=255)
aaCGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGa < 1:6545111/93‑1 (MQ=255)
aaCGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGa < 1:4840019/93‑1 (MQ=255)
aaCGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGa < 1:3759344/93‑1 (MQ=255)
aaCGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGa < 2:335110/93‑1 (MQ=255)
cGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGaca < 1:5931698/93‑1 (MQ=255)
gCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGacac > 2:214733/1‑93 (MQ=255)
ttATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATAATCGTTTTCCATTGGGTAAAAATCTGACACTg > 1:1818148/1‑93 (MQ=255)
tATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGa < 1:406243/93‑1 (MQ=255)
tATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGa < 2:5148907/93‑1 (MQ=255)
tATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGa < 1:764248/93‑1 (MQ=255)
aTCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGCCACTGAt > 2:2243902/1‑93 (MQ=255)
aTCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGAt < 2:5094056/93‑1 (MQ=255)
tCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATc < 2:3909086/93‑1 (MQ=255)
ccACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAAACATCGTTTTCCATTGGGTAAAAATCTAACACTGCTCa < 2:6999438/93‑1 (MQ=255)
cACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCAt < 1:7673188/93‑1 (MQ=255)
cACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCAt < 2:1013991/93‑1 (MQ=255)
cACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCAt < 1:6290388/93‑1 (MQ=255)
cACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCAt > 1:3597643/1‑93 (MQ=255)
cACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCAt < 1:2099713/93‑1 (MQ=255)
gcccGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATg < 2:852852/92‑1 (MQ=255)
aCCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATg > 2:2097216/1‑93 (MQ=255)
cccGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGt < 2:2621193/93‑1 (MQ=255)
cccGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGt > 2:7934789/1‑93 (MQ=255)
cccGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCCGACACTGATCATGt < 1:5790179/93‑1 (MQ=255)
ccGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGtt < 2:3136766/93‑1 (MQ=255)
ccGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGtt < 2:3574196/93‑1 (MQ=255)
cGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTa > 2:3996163/1‑93 (MQ=255)
gTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTAt < 2:1164712/93‑1 (MQ=255)
gTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTAt < 1:7224892/93‑1 (MQ=255)
gTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTAt < 1:1280965/93‑1 (MQ=255)
gTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTAt < 1:7022656/93‑1 (MQ=255)
tGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATg > 1:410695/1‑93 (MQ=255)
tGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATg > 1:3625920/1‑93 (MQ=255)
gATTACGGGAAAAGCGCGCAAAGCGCGTCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATG‑aaa < 1:609021/93‑1 (MQ=255)
aTTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATG‑aaaa > 1:4439505/1‑93 (MQ=255)
ttACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATG‑aaaaa > 2:5176266/1‑93 (MQ=255)
aCGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATG‑aaaaaaa < 1:7191528/93‑1 (MQ=255)
cGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAGATCTGACACTGATCATGTTATG‑aaaaaaaa > 2:7729853/1‑93 (MQ=255)
cGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATG‑aaaaaaaa < 2:5932720/93‑1 (MQ=255)
cGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATG‑aaaaaaaa < 1:952473/93‑1 (MQ=255)
gAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATG‑AAAAAAAATaa < 1:7161592/93‑1 (MQ=255)
aaaaGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATG‑AAAAAAAATaac < 1:1771803/93‑1 (MQ=255)
aaaaGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATG‑AAAAAAAATaac < 2:5596649/93‑1 (MQ=255)
aaaGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATG‑AAAAAAAATaaca < 2:2511654/93‑1 (MQ=255)
aaaGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATG‑AAAAAAAATaaca < 1:3070320/93‑1 (MQ=255)
aaGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATG‑AAAAAAAATaacaa < 1:4797525/93‑1 (MQ=255)
aGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATG‑AAAAAAAATaacaac < 2:2450468/93‑1 (MQ=255)
aGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATG‑AAAAAAAATaacaac < 2:6638039/93‑1 (MQ=255)
gcgcgcAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGAAAAAAAAATaacaat > 1:620236/1‑92 (MQ=255)
gcgcgcAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATG‑AAAAAAAATAACAACt > 1:7609320/1‑93 (MQ=255)
agcgcAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATG‑AAAAAAAATAACAACtt < 1:6442552/92‑1 (MQ=255)
gcgcAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATG‑AAAAAAAATAACAACttt < 1:4812205/93‑1 (MQ=255)
cgcAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATG‑AAAAAAAATAACAACtttt < 1:2554081/93‑1 (MQ=255)
gcAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATG‑AAAAAAAATAACAACttttt < 1:1151275/93‑1 (MQ=255)
cAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATG‑AAAAAAAATAACAACtttttt < 1:5905541/93‑1 (MQ=255)
aaaGCGCGGCAAAACTGATAAAAAAATCATCGTTTCCCCTTGGGTAAAAATCTGACACTGATCATGTTATG‑AAAAAAAATAACAACTTTTTTa > 2:4924536/1‑93 (MQ=255)
|
TTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATG‑AAAAAAAATAACAACTTTTTTAT > NC_000913/1934392‑1934571
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGAAAAAAAATAACAACTTTTTTATCTG > NC_000913/1934389‑1934574
|
TAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGC > SRR4302543.6666475/1‑94 (MQ=60)
AATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCG < SRR4302543.3726257/94‑1 (MQ=60)
TTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCCCCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCG < SRR4302543.2120922/94‑1 (MQ=60)
TTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCGACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGG > SRR4302543.4064657/1‑94 (MQ=60)
TTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGG > SRR4302543.7650841/1‑94 (MQ=60)
TTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGC < SRR4302543.4296116/94‑1 (MQ=60)
TTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAA > SRR4302543.5071913/1‑94 (MQ=60)
CGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACT > SRR4302543.3437341/1‑94 (MQ=60)
CACTGTACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAA < SRR4302543.2896150/94‑1 (MQ=60)
CTGTACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAA > SRR4302543.4863112/1‑94 (MQ=60)
TGTACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAA < SRR4302543.7569681/94‑1 (MQ=60)
TGTACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAA > SRR4302543.3817498/1‑94 (MQ=60)
TGTACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAA > SRR4302543.1017668/1‑94 (MQ=60)
GTACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAA > SRR4302543.317703/1‑94 (MQ=60)
ACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAAT > SRR4302543.1115262/1‑94 (MQ=60)
ACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAAT < SRR4302543.5222088/94‑1 (MQ=60)
TGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCA > SRR4302543.3828617/1‑94 (MQ=60)
TGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCA < SRR4302543.4123056/94‑1 (MQ=60)
TGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCA < SRR4302543.4776548/94‑1 (MQ=60)
TGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCA < SRR4302543.1958964/94‑1 (MQ=60)
TGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCA > SRR4302543.193746/1‑94 (MQ=60)
GCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCAT < SRR4302543.4331728/94‑1 (MQ=60)
CTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATC < SRR4302543.3185804/94‑1 (MQ=60)
CTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATC > SRR4302543.2854065/1‑94 (MQ=60)
CTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGAGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATC > SRR4302543.6002170/1‑94 (MQ=60)
TTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTT > SRR4302543.4593804/1‑94 (MQ=60)
TTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTT < SRR4302543.994946/94‑1 (MQ=60)
TACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTT < SRR4302543.6151794/94‑1 (MQ=60)
TACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTT < SRR4302543.636341/94‑1 (MQ=60)
ACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTT > SRR4302543.1408323/1‑94 (MQ=60)
GAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCC > SRR4302543.1050761/1‑94 (MQ=60)
GAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCC < SRR4302543.7900544/94‑1 (MQ=60)
GAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCC < SRR4302543.833096/94‑1 (MQ=60)
AGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCA < SRR4302543.6337599/94‑1 (MQ=60)
GCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCAT < SRR4302543.1258496/94‑1 (MQ=60)
TTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAGAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTG < SRR4302543.1547930/94‑1 (MQ=60)
TTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTG > SRR4302543.3233692/1‑94 (MQ=60)
TTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTG < SRR4302543.3354245/94‑1 (MQ=60)
TTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTG < SRR4302543.4212552/94‑1 (MQ=60)
GCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGG < SRR4302543.2215259/94‑1 (MQ=60)
CGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGT < SRR4302543.6205908/94‑1 (MQ=60)
AAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAA < SRR4302543.7809367/94‑1 (MQ=60)
AAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAA < SRR4302543.7809366/94‑1 (MQ=60)
AAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAA > SRR4302543.2412394/1‑94 (MQ=60)
AACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAA > SRR4302543.5624151/1‑94 (MQ=60)
ACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAA < SRR4302543.2803640/94‑1 (MQ=60)
CTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAACAATCATCGTTTTCCgttcgatagaagt > SRR4302543.1930340/1‑81 (MQ=60)
CTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAAT > SRR4302543.2233936/1‑94 (MQ=60)
CTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAAT < SRR4302543.7574010/94‑1 (MQ=60)
CTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAAT > SRR4302543.1933611/1‑94 (MQ=60)
GTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCT > SRR4302543.4823533/1‑94 (MQ=60)
GTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCT > SRR4302543.6182805/1‑94 (MQ=60)
AACGCTTATCCTCCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGAC < SRR4302543.3792427/94‑1 (MQ=60)
AACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGAC < SRR4302543.6625756/94‑1 (MQ=60)
AACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGAC < SRR4302543.3792428/94‑1 (MQ=60)
AACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGAC < SRR4302543.4884155/94‑1 (MQ=60)
AACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGAC < SRR4302543.6606713/94‑1 (MQ=60)
ACGCTTATCCACCCGTGCGATTACGGGAAAAGCTCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACA < SRR4302543.7725508/94‑1 (MQ=60)
CGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACAC < SRR4302543.5985939/94‑1 (MQ=60)
CTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTG > SRR4302543.7553528/1‑94 (MQ=60)
CTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTG > SRR4302543.1834456/1‑94 (MQ=60)
CTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATAATCGTTTTCCATTGGGTAAAAATCTGACACTG > SRR4302543.1834457/1‑94 (MQ=60)
TATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGAT < SRR4302543.770976/94‑1 (MQ=60)
TATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGAT < SRR4302543.3622111/94‑1 (MQ=60)
TATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGAT < SRR4302543.409990/94‑1 (MQ=60)
TCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCA < SRR4302543.3817179/94‑1 (MQ=60)
CCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCAT < SRR4302543.6565574/94‑1 (MQ=60)
CCACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCAT > SRR4302543.3629392/1‑94 (MQ=60)
CACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATG < SRR4302543.6349621/94‑1 (MQ=60)
CACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATG < SRR4302543.2118498/94‑1 (MQ=60)
CACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATG < SRR4302543.3228967/94‑1 (MQ=60)
CACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATG > SRR4302543.2439590/1‑94 (MQ=60)
CACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATG > SRR4302543.7090516/1‑94 (MQ=60)
CACCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATG < SRR4302543.7745893/94‑1 (MQ=60)
CCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTT < SRR4302543.7261119/94‑1 (MQ=60)
CCCGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCCGACACTGATCATGTT < SRR4302543.5842863/94‑1 (MQ=60)
ACCGTGCGATTACGGGAAAAGCGCGCAAAGCTCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCCGACACTGATCATGTT < SRR4302543.5842865/94‑1 (MQ=60)
CGTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTAT < SRR4302543.2119277/94‑1 (MQ=60)
GTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATG > SRR4302543.3657856/1‑94 (MQ=60)
GTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATG > SRR4302543.3657855/1‑94 (MQ=60)
GTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATG < SRR4302543.7089941/94‑1 (MQ=60)
GTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATG > SRR4302543.414490/1‑94 (MQ=60)
GTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATG < SRR4302543.7294901/94‑1 (MQ=60)
GTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATG < SRR4302543.2749946/94‑1 (MQ=60)
GTGCGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATG < SRR4302543.1292385/94‑1 (MQ=60)
CGATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGAAA > SRR4302543.1110230/1‑94 (MQ=60)
GATTACGGGAAAAGCGCGCAAAGCGCGTCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGAAAA < SRR4302543.614586/94‑1 (MQ=60)
GATTACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGAAAA > SRR4302543.4479709/1‑94 (MQ=60)
ACGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGAAAAAAAA < SRR4302543.7261277/94‑1 (MQ=60)
CGGGGAAAGCGCGCAAAGGGGCGGAAAACTGGTAAAAAAATCCATGTTTTGCATTGGGTAAAAATCTGACACTGATCATGTTATGAAAAAAAAT < SRR4302543.960794/94‑1 (MQ=44)
CGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGAAAAAAAAT < SRR4302543.960795/94‑1 (MQ=60)
CGGGAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGAAAAAAAAT > SRR4302543.2033732/1‑94 (MQ=60)
GAAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGAAAAAAAATAAC < SRR4302543.7231171/94‑1 (MQ=60)
AAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGAAAAAAAATAACA < SRR4302543.3018671/94‑1 (MQ=60)
AAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGAAAAAAAATAACA < SRR4302543.1787641/94‑1 (MQ=60)
AAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGAAAAAAAATAACA < SRR4302543.1379061/94‑1 (MQ=60)
AAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGAAAAAAAATAACA < SRR4302543.4958866/94‑1 (MQ=60)
AAAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGAAAAAAAATAACA < SRR4302543.484291/94‑1 (MQ=60)
AAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGAAAAAAAATAACAA < SRR4302543.578642/94‑1 (MQ=60)
AAAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGAAAAAAAATAACAA < SRR4302543.3097931/94‑1 (MQ=60)
AAGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGAAAAAAAATAACAAC < SRR4302543.4841372/94‑1 (MQ=60)
AGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGAAAAAAAAataacaat > SRR4302543.625912/1‑86 (MQ=60)
AGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGAAAAAAAATAACAACT > SRR4302543.7681563/1‑94 (MQ=60)
AGCGCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGAAAAAAAATAACAACT < SRR4302543.1138858/94‑1 (MQ=60)
AGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGAAAAAAAATAACAACTTT < SRR4302543.6503245/94‑1 (MQ=60)
GCGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGAAAAAAAATAACAACTTTT < SRR4302543.4856149/94‑1 (MQ=60)
CGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGAAAAAAAATAACAACTTTTT < SRR4302543.2577428/94‑1 (MQ=60)
CGCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGAAAAAAAATAACAACTTTTT > SRR4302543.7275676/1‑94 (MQ=60)
GCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGAAAAAAAATAACAACTTTTTT < SRR4302543.1905837/94‑1 (MQ=60)
GCAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGAAAAAAAATAACAACTTTTTT < SRR4302543.1161765/94‑1 (MQ=60)
CAAAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGAAAAAAAATAACAACTTTTTTA < SRR4302543.5959441/94‑1 (MQ=60)
AAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGAAAAAAAATAACAACTTTTTTATC > SRR4302543.7954432/1‑94 (MQ=60)
AAGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGAAAAAAAATAACAACTTTTTTATC < SRR4302543.7684005/94‑1 (MQ=60)
AGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGAAAAAAAATAACAACTTTTTTATCT < SRR4302543.213616/94‑1 (MQ=60)
AGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGAAAAAAAATAACAACTTTTTTATCT < SRR4302543.7897805/94‑1 (MQ=60)
AGCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGAAAAAAAATAACAACTTTTTTATCT < SRR4302543.6492746/94‑1 (MQ=60)
GCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGAAAAAAAATAACAACTTTTTTATCTG < SRR4302543.2130029/94‑1 (MQ=60)
GCGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGAAAAAAAATAACAACTTTTTTATCTG < SRR4302543.4867425/94‑1 (MQ=60)
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TAATTTTCTTACGGTGCACTGTACTGCTTTTACGAGCTTGCGAAAACTGTAAACGCTTATCCACCCGTGCGATTACGGGAAAAGCGCGCAAAGTGCGGCAAAACTGATAAAAAAATCATCGTTTTCCATTGGGTAAAAATCTGACACTGATCATGTTATGAAAAAAAATAACAACTTTTTTATCTG > NC_000913/1934389‑1934574
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
