Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1696 |
279.3 |
15874187 |
97.8% |
15524954 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,938,811 |
T→C |
G262G (GGA→GGG) |
yebA ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,938,811 | 0 | T | C | 100.0%
| 633.5
/ NA
| 198 | G262G (GGA→GGG) | yebA | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (90/108); total (90/108) |
Only 100 of 204 total aligned reads displayed.
GGTGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAATCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAACG > NC_000913/1938722‑1938900
|
tgCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCttt < 2:170349/93‑1 (MQ=255)
tgCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCttt < 2:7176162/93‑1 (MQ=255)
cAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCg > 2:595268/1‑93 (MQ=255)
aaCGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGc > 1:6284706/1‑93 (MQ=255)
aCGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGcc > 2:4022139/1‑93 (MQ=255)
aCGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGcc > 1:2911862/1‑93 (MQ=255)
cgcgACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCa < 2:7588653/93‑1 (MQ=255)
gcgACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAg > 2:6257679/1‑93 (MQ=255)
gACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGAc > 1:4373025/1‑93 (MQ=255)
gACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACACTTTCGCAAGAc > 1:6177327/1‑93 (MQ=255)
aCCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGAcc < 2:7371125/93‑1 (MQ=255)
aCCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGAcc > 2:3206893/1‑93 (MQ=255)
ccGGTCACCGGATTAGTACGACGCGGTTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCa < 1:2192645/93‑1 (MQ=255)
cGGTCGCCGGATTAGTCCTGCGCAGGTTAAAATTAGTCGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAAACCAg < 2:4272624/93‑1 (MQ=255)
cGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAg < 2:6447602/93‑1 (MQ=255)
cGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAg < 1:2224388/93‑1 (MQ=255)
cGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAg < 1:5858371/93‑1 (MQ=255)
gTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTa > 1:240128/1‑93 (MQ=255)
gTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTa < 1:5955865/93‑1 (MQ=255)
gTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTa > 1:6748640/1‑93 (MQ=255)
cACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTAcc < 2:708102/93‑1 (MQ=255)
aCCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCg > 1:5659079/1‑93 (MQ=255)
ccGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGt > 1:4031393/1‑93 (MQ=255)
ccGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGt < 1:3015184/93‑1 (MQ=255)
ggATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTa > 2:1914444/1‑93 (MQ=255)
ggATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTa < 1:372010/93‑1 (MQ=255)
gATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTAc > 2:26110/1‑93 (MQ=255)
gATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTAc < 2:3974945/93‑1 (MQ=255)
gATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTAc > 1:5885420/1‑93 (MQ=255)
aTTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACg > 2:3079421/1‑93 (MQ=255)
aTTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACg > 2:5133649/1‑93 (MQ=255)
aGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATc < 2:5295986/93‑1 (MQ=255)
tACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGt > 1:112831/1‑93 (MQ=255)
acgCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGaa < 1:7507316/93‑1 (MQ=255)
cgcgGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAAt > 1:144759/1‑93 (MQ=255)
gcgGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAAtt > 1:5389626/1‑93 (MQ=255)
gggTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTg > 1:5169105/1‑93 (MQ=255)
ggTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGc > 1:5005008/1‑93 (MQ=255)
aaaaTTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATc > 1:5324626/1‑93 (MQ=255)
aaaaTTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATc > 2:1066484/1‑93 (MQ=255)
aTTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTc < 2:3027111/93‑1 (MQ=255)
aTTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTc < 2:6921567/93‑1 (MQ=255)
ttAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCa < 1:4759667/93‑1 (MQ=255)
tAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAg < 1:5531481/93‑1 (MQ=255)
tAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAg > 2:7867544/1‑93 (MQ=255)
aGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAGCCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAgc < 1:688298/93‑1 (MQ=255)
aGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGACCCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAgc < 1:7548839/93‑1 (MQ=255)
aGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAgc < 2:2526697/93‑1 (MQ=255)
aGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAgc < 1:4386507/93‑1 (MQ=255)
gACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAgcg > 1:3318980/1‑93 (MQ=255)
aCGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAgcgc < 2:4065840/93‑1 (MQ=255)
gagaTACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCgg > 1:5214584/1‑93 (MQ=255)
gaTACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGAt > 2:3436173/1‑93 (MQ=255)
aTACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATa > 1:1831244/1‑93 (MQ=255)
aTACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATa < 2:6764250/93‑1 (MQ=255)
tACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAg > 1:1045383/1‑93 (MQ=255)
ggAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGt > 2:5536519/1‑93 (MQ=255)
gAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGta > 1:3614403/1‑93 (MQ=255)
gAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGta > 1:5695073/1‑93 (MQ=255)
gAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGta < 1:4738124/93‑1 (MQ=255)
gAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGta > 1:2045531/1‑93 (MQ=255)
aaCTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGtaa > 2:4146307/1‑93 (MQ=255)
aaCTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGGACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGtaa > 1:3166651/1‑93 (MQ=255)
aCTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGtaat > 2:6889378/1‑93 (MQ=255)
tGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGtaataa > 2:354934/1‑93 (MQ=255)
gTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTaataat < 2:2132527/93‑1 (MQ=255)
tttCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATc < 2:6214024/93‑1 (MQ=255)
tttCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATc < 2:4501840/93‑1 (MQ=255)
tttCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATc > 1:6450933/1‑93 (MQ=255)
tCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCtt < 1:2239983/93‑1 (MQ=255)
tCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCtt < 2:4790648/93‑1 (MQ=255)
tCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCtt < 1:6349557/93‑1 (MQ=255)
tCGCCGCCGGTAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTGACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCtt < 2:194510/93‑1 (MQ=255)
gCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTa > 1:2980754/1‑93 (MQ=255)
gCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTa > 1:59957/1‑93 (MQ=255)
gCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTa > 1:2685923/1‑93 (MQ=255)
gCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTa > 2:4849149/1‑93 (MQ=255)
ccGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTAc > 2:3914714/1‑93 (MQ=255)
ccGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTAc < 1:355497/93‑1 (MQ=255)
cGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTAcc < 1:3772988/93‑1 (MQ=255)
cGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTAcc > 1:7792483/1‑93 (MQ=255)
ctCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCt < 2:6858356/92‑1 (MQ=255)
gggAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCt > 1:7110568/1‑93 (MQ=255)
gggAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCt < 2:6935028/93‑1 (MQ=255)
gggAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCt < 1:7170426/93‑1 (MQ=255)
gggAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCt > 1:3057422/1‑93 (MQ=255)
gggAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCt > 2:4562345/1‑93 (MQ=255)
gggAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCt > 2:6429702/1‑93 (MQ=255)
gAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGa > 2:4991628/1‑93 (MQ=255)
aaTCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGaa > 1:1775161/1‑93 (MQ=255)
tCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACg > 1:638861/1‑93 (MQ=255)
cAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCaa > 1:6573556/1‑93 (MQ=255)
aaGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCaaa < 2:2911861/93‑1 (MQ=255)
aaGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCaaa < 2:4899864/93‑1 (MQ=255)
aaGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCaaa > 2:5189819/1‑93 (MQ=255)
aaGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCaaa < 2:487954/93‑1 (MQ=255)
aGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAAc < 2:7884198/93‑1 (MQ=255)
aGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAAc < 2:150114/93‑1 (MQ=255)
gAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAACg < 1:6951950/93‑1 (MQ=255)
gAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAACg < 1:38862/93‑1 (MQ=255)
|
GGTGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAATCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAACG > NC_000913/1938722‑1938900
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTGTGGTGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAATCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAACGTAC > NC_000913/1938718‑1938903
|
GTGTGGTGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAAC < SRR4302543.7290500/94‑1 (MQ=60)
TGGTGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCT > SRR4302543.4462410/1‑94 (MQ=60)
GTGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTT < SRR4302543.781093/94‑1 (MQ=60)
TGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTC > SRR4302543.7237647/1‑94 (MQ=60)
GCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCG < SRR4302543.2034985/94‑1 (MQ=60)
CAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGC > SRR4302543.6343911/1‑94 (MQ=60)
AACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCC > SRR4302543.2938325/1‑94 (MQ=60)
CGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGAC > SRR4302543.4412637/1‑94 (MQ=60)
CGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACACTTTCGCAAGAC > SRR4302543.6235732/1‑94 (MQ=60)
GACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACC > SRR4302543.6291845/1‑94 (MQ=60)
CCGGTCACCGGATTAGTACGACGCGGTTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAG < SRR4302543.2212341/94‑1 (MQ=60)
CCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAG < SRR4302543.3079623/94‑1 (MQ=60)
CCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAG < SRR4302543.2212342/94‑1 (MQ=60)
CGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGT < SRR4302543.5911700/94‑1 (MQ=60)
CGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGT < SRR4302543.2244467/94‑1 (MQ=60)
GGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTA > SRR4302543.6812369/1‑94 (MQ=60)
GGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTA > SRR4302543.242210/1‑94 (MQ=60)
GTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTAC < SRR4302543.6010381/94‑1 (MQ=60)
TCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACC > SRR4302543.108501/1‑94 (MQ=60)
CACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCG < SRR4302543.6949527/94‑1 (MQ=60)
CACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCG > SRR4302543.5710693/1‑94 (MQ=60)
ACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGT > SRR4302543.4067436/1‑94 (MQ=60)
ACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGT > SRR4302543.3569041/1‑94 (MQ=60)
CCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTT < SRR4302543.3042468/94‑1 (MQ=60)
GGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTAC < SRR4302543.375439/94‑1 (MQ=60)
GGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTAC < SRR4302543.363500/94‑1 (MQ=60)
GGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTAC > SRR4302543.5939059/1‑94 (MQ=60)
TAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATC < SRR4302543.1808152/94‑1 (MQ=60)
TAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATC < SRR4302543.3178972/94‑1 (MQ=60)
ttacgccgcggtaTAAAAGTAGACGAGATACCGAACTGCTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGT < SRR4302543.2939931/81‑1 (MQ=60)
GTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGT > SRR4302543.113857/1‑94 (MQ=60)
ACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAG < SRR4302543.6513306/94‑1 (MQ=60)
GACGCGGGTTAAAATTAGAC‑AGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCCTTCGCCCCACCAGTACCGTTACCATCGGAGAAT > SRR4302543.607544/1‑94 (MQ=60)
ACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAAT > SRR4302543.146019/1‑94 (MQ=60)
ACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAAT < SRR4302543.7579063/94‑1 (MQ=60)
CGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATT > SRR4302543.5438611/1‑94 (MQ=60)
GCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTT < SRR4302543.6469307/94‑1 (MQ=60)
CGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTG < SRR4302543.6101184/94‑1 (MQ=60)
CGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTG > SRR4302543.5215798/1‑94 (MQ=60)
CGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTG > SRR4302543.2134400/1‑94 (MQ=60)
GGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGC > SRR4302543.3249920/1‑94 (MQ=60)
GGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGC > SRR4302543.5050563/1‑94 (MQ=60)
TTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCAT < SRR4302543.5713744/94‑1 (MQ=60)
TAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATC > SRR4302543.5372768/1‑94 (MQ=60)
TAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATC > SRR4302543.2832011/1‑94 (MQ=60)
AATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTC > SRR4302543.4938587/1‑94 (MQ=60)
AATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTC < SRR4302543.3889612/94‑1 (MQ=60)
ATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCA < SRR4302543.974372/94‑1 (MQ=60)
TTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAG > SRR4302543.7585539/1‑94 (MQ=60)
TTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAG < SRR4302543.2387585/94‑1 (MQ=60)
TTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAG < SRR4302543.5389128/94‑1 (MQ=60)
TTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAG < SRR4302543.4803156/94‑1 (MQ=60)
TAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGC > SRR4302543.4077460/1‑94 (MQ=60)
TAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGC < SRR4302543.5581740/94‑1 (MQ=60)
TAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGC < SRR4302543.5581739/94‑1 (MQ=60)
TAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGC < SRR4302543.3683540/94‑1 (MQ=60)
AGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAGCCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCG < SRR4302543.694627/94‑1 (MQ=60)
AGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAGCCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCG < SRR4302543.4426275/94‑1 (MQ=60)
AGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGACCCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCG < SRR4302543.7620747/94‑1 (MQ=60)
AGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCG < SRR4302543.4018066/94‑1 (MQ=60)
AGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCG < SRR4302543.5924327/94‑1 (MQ=60)
AGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCG < SRR4302543.4426276/94‑1 (MQ=60)
AGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCG > SRR4302543.3348934/1‑94 (MQ=60)
CGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTTCCATCTTCAGCGCGG > SRR4302543.4796734/1‑94 (MQ=60)
CGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGG > SRR4302543.5261561/1‑94 (MQ=60)
AGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGAT < SRR4302543.4493044/94‑1 (MQ=60)
GATACGTAACGGTGTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATA < SRR4302543.1676416/94‑1 (MQ=60)
GATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATA > SRR4302543.1847706/1‑94 (MQ=60)
ATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAG > SRR4302543.1054725/1‑94 (MQ=60)
ATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAG < SRR4302543.6678154/94‑1 (MQ=60)
TACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGC < SRR4302543.6018820/94‑1 (MQ=60)
ACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCG < SRR4302543.6438522/94‑1 (MQ=60)
GGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTA > SRR4302543.5747033/1‑94 (MQ=60)
GGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTA > SRR4302543.3646271/1‑94 (MQ=60)
GGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTA > SRR4302543.7412363/1‑94 (MQ=60)
GGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTA > SRR4302543.2063867/1‑94 (MQ=60)
GAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAA < SRR4302543.4781417/94‑1 (MQ=60)
GAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGGACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAA > SRR4302543.3195164/1‑94 (MQ=60)
AACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAAT < SRR4302543.7511482/94‑1 (MQ=60)
TGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAAT < SRR4302543.3763246/94‑1 (MQ=60)
GTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATC > SRR4302543.6002587/1‑94 (MQ=60)
GTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATC > SRR4302543.6511721/1‑94 (MQ=60)
TTCGCCGTCGGGAATCGCAAGATCCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTT < SRR4302543.2478518/94‑1 (MQ=60)
TCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTT < SRR4302543.2260282/94‑1 (MQ=60)
TCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTT < SRR4302543.6409262/94‑1 (MQ=60)
CGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTA > SRR4302543.2710269/1‑94 (MQ=60)
CGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTA < SRR4302543.634652/94‑1 (MQ=60)
CGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTA > SRR4302543.3007822/1‑94 (MQ=60)
CGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTA > SRR4302543.3007823/1‑94 (MQ=60)
CGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTA > SRR4302543.60486/1‑94 (MQ=60)
CCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACC > SRR4302543.7865924/1‑94 (MQ=60)
CCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACC < SRR4302543.358783/94‑1 (MQ=60)
CCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACC > SRR4302543.5147655/1‑94 (MQ=60)
CGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCT < SRR4302543.3806212/94‑1 (MQ=60)
GTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTT < SRR4302543.224876/94‑1 (MQ=60)
GTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTT > SRR4302543.6837976/1‑94 (MQ=60)
CGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCT > SRR4302543.3084941/1‑94 (MQ=60)
CGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCT > SRR4302543.7179640/1‑94 (MQ=60)
GGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTG < SRR4302543.7240055/94‑1 (MQ=60)
GAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAA > SRR4302543.1791023/1‑94 (MQ=60)
AATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAAC > SRR4302543.5253379/1‑94 (MQ=60)
ATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACG > SRR4302543.644694/1‑94 (MQ=60)
TCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGC > SRR4302543.7125024/1‑94 (MQ=60)
TCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGC < SRR4302543.5701564/94‑1 (MQ=60)
TCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGC < SRR4302543.1198657/94‑1 (MQ=60)
GCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAA > SRR4302543.6635446/1‑94 (MQ=60)
CAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAA > SRR4302543.5304881/1‑94 (MQ=60)
AGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAACG > SRR4302543.5901334/1‑94 (MQ=60)
GAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAACGT < SRR4302543.7017350/94‑1 (MQ=60)
GAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAACGT > SRR4302543.3154663/1‑94 (MQ=60)
GAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAACGT < SRR4302543.39221/94‑1 (MQ=60)
AACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAACGTA > SRR4302543.6731302/1‑94 (MQ=60)
ACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAACGTAC > SRR4302543.2437255/1‑94 (MQ=60)
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GTGTGGTGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAATCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAACGTAC > NC_000913/1938718‑1938903
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
